BLASTX nr result

ID: Panax21_contig00022166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022166
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30812.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis v...    76   3e-12
ref|XP_002279792.2| PREDICTED: protein MEI2-like 2-like [Vitis v...    74   1e-11
ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine...    68   7e-10
ref|XP_003595581.1| Polyadenylate-binding protein [Medicago trun...    68   9e-10

>emb|CBI30812.3| unnamed protein product [Vitis vinifera]
          Length = 787

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/59 (62%), Positives = 45/59 (76%)
 Frame = +2

Query: 197 MQQSSAHFISGPSKLTSINDSKEMGCGAMGFRSGSDAYHASSDATLFSSSLPVLPHEKL 373
           M++SS H  SGPSK+  ++  K +G GA G R GSD Y+AS+DATLFS SLPVLPHEKL
Sbjct: 25  MERSSDHSSSGPSKIPYVSIPKAVGSGAWGMRPGSDGYNASNDATLFSCSLPVLPHEKL 83


>ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
          Length = 860

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/59 (62%), Positives = 45/59 (76%)
 Frame = +2

Query: 197 MQQSSAHFISGPSKLTSINDSKEMGCGAMGFRSGSDAYHASSDATLFSSSLPVLPHEKL 373
           M++SS H  SGPSK+  ++  K +G GA G R GSD Y+AS+DATLFS SLPVLPHEKL
Sbjct: 1   MERSSDHSSSGPSKIPYVSIPKAVGSGAWGMRPGSDGYNASNDATLFSCSLPVLPHEKL 59


>ref|XP_002279792.2| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
          Length = 842

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/59 (61%), Positives = 44/59 (74%)
 Frame = +2

Query: 197 MQQSSAHFISGPSKLTSINDSKEMGCGAMGFRSGSDAYHASSDATLFSSSLPVLPHEKL 373
           M+Q +   ISGP K+ S+N  K++G GA G   G+DAYH SSD +LFSSSLPVLPHEKL
Sbjct: 1   MEQHAKGSISGPFKIPSLNVPKKIGSGAWGIPHGTDAYHTSSDVSLFSSSLPVLPHEKL 59


>ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
          Length = 862

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/59 (62%), Positives = 42/59 (71%)
 Frame = +2

Query: 197 MQQSSAHFISGPSKLTSINDSKEMGCGAMGFRSGSDAYHASSDATLFSSSLPVLPHEKL 373
           M+QS      GPSK+ SI    + G GA    SGSD+YHASSDA+LFSSSLPVLPHEKL
Sbjct: 1   MRQSFDPSFLGPSKIPSIKVPGKAGNGAWEALSGSDSYHASSDASLFSSSLPVLPHEKL 59


>ref|XP_003595581.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|47834691|gb|AAT38999.1| AML5 [Medicago truncatula]
           gi|87241360|gb|ABD33218.1| RNA-binding region RNP-1 (RNA
           recognition motif); RNA recognition motif 2 [Medicago
           truncatula] gi|355484629|gb|AES65832.1|
           Polyadenylate-binding protein [Medicago truncatula]
          Length = 865

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/59 (59%), Positives = 43/59 (72%)
 Frame = +2

Query: 197 MQQSSAHFISGPSKLTSINDSKEMGCGAMGFRSGSDAYHASSDATLFSSSLPVLPHEKL 373
           M+QS       PSK+  IN + ++  GA+   SGSD+YHASSDA+LFSSSLPVLPHEKL
Sbjct: 1   MKQSFDPSFIAPSKIPPINTAGKLRHGALEVSSGSDSYHASSDASLFSSSLPVLPHEKL 59


Top