BLASTX nr result

ID: Panax21_contig00022147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022147
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275624.1| PREDICTED: oxygen-evolving enhancer protein ...   293   3e-77
emb|CBI23524.3| unnamed protein product [Vitis vinifera]              286   3e-75
ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Popu...   286   6e-75
ref|XP_002317273.1| hypothetical protein POPTRDRAFT_834003 [Popu...   277   2e-72
gb|ABK95035.1| unknown [Populus trichocarpa]                          277   3e-72

>ref|XP_002275624.1| PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic
           [Vitis vinifera]
          Length = 231

 Score =  293 bits (751), Expect = 3e-77
 Identities = 160/232 (68%), Positives = 179/232 (77%)
 Frame = -3

Query: 706 MAQAMASMTGLCGSSQAVLEGSLQLSGSTRLCQASNTRIAVGRPGFVVRAQQVSAETETS 527
           MAQAMASM GL GSSQAVLEGSLQ+SGSTRL   S++R+ V RPGF VRAQQ   E ETS
Sbjct: 1   MAQAMASMAGLRGSSQAVLEGSLQISGSTRLSSGSSSRVGVARPGFSVRAQQAPVEPETS 60

Query: 526 RRAMXXXXXXXXXXXGSFAKEVLAAATSIKVXXXXXXXXXXXGTLNSDEARDTDLPLKDR 347
           RRA+            SF + VLA A SIKV           GTLNSDEARD DLPLKDR
Sbjct: 61  RRAVLGLVAAGLASG-SFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDR 119

Query: 346 FFLQPLPPSEAVLRAKDSAKDIINVKELIDKKAWPYVQNDLRLKAGYLRYDLNTVISSKP 167
           FF+QPLPP+ A +RAK+SAKDI+ VK LIDKKAWPYVQ DLRLKA YLRYDLNTVIS+KP
Sbjct: 120 FFIQPLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKP 179

Query: 166 KDEKKLLQDLTGKLFNVISDLDYAAKTKSTPKAEKSYAETVSKLNDVLTKLG 11
           KDEKK L++LTGKLF+ ISDLD+AAK KS+P AEK YA TVS LNDVL+K+G
Sbjct: 180 KDEKKSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 231


>emb|CBI23524.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  286 bits (733), Expect = 3e-75
 Identities = 156/228 (68%), Positives = 175/228 (76%)
 Frame = -3

Query: 694 MASMTGLCGSSQAVLEGSLQLSGSTRLCQASNTRIAVGRPGFVVRAQQVSAETETSRRAM 515
           MASM GL GSSQAVLEGSLQ+SGSTRL   S++R+ V RPGF VRAQQ   E ETSRRA+
Sbjct: 1   MASMAGLRGSSQAVLEGSLQISGSTRLSSGSSSRVGVARPGFSVRAQQAPVEPETSRRAV 60

Query: 514 XXXXXXXXXXXGSFAKEVLAAATSIKVXXXXXXXXXXXGTLNSDEARDTDLPLKDRFFLQ 335
                       SF + VLA A SIKV           GTLNSDEARD DLPLKDRFF+Q
Sbjct: 61  LGLVAAGLASG-SFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFFIQ 119

Query: 334 PLPPSEAVLRAKDSAKDIINVKELIDKKAWPYVQNDLRLKAGYLRYDLNTVISSKPKDEK 155
           PLPP+ A +RAK+SAKDI+ VK LIDKKAWPYVQ DLRLKA YLRYDLNTVIS+KPKDEK
Sbjct: 120 PLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPKDEK 179

Query: 154 KLLQDLTGKLFNVISDLDYAAKTKSTPKAEKSYAETVSKLNDVLTKLG 11
           K L++LTGKLF+ ISDLD+AAK KS+P AEK YA TVS LNDVL+K+G
Sbjct: 180 KSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 227


>ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Populus trichocarpa]
           gi|118486762|gb|ABK95216.1| unknown [Populus
           trichocarpa] gi|222848607|gb|EEE86154.1| hypothetical
           protein POPTRDRAFT_831063 [Populus trichocarpa]
          Length = 234

 Score =  286 bits (731), Expect = 6e-75
 Identities = 161/235 (68%), Positives = 181/235 (77%), Gaps = 3/235 (1%)
 Frame = -3

Query: 706 MAQAMASMTGLCGSSQAVLEGSLQLSGSTRLCQ--ASNTRIAVGRPGFVVRAQQ-VSAET 536
           MAQAMASM GL G+SQAVLEGSLQLSGS RL    ++ TR+AV RPG  VRAQQ VS E 
Sbjct: 1   MAQAMASMAGLRGTSQAVLEGSLQLSGSNRLLNVPSNTTRVAVARPGLAVRAQQQVSGEL 60

Query: 535 ETSRRAMXXXXXXXXXXXGSFAKEVLAAATSIKVXXXXXXXXXXXGTLNSDEARDTDLPL 356
           ETSRRAM            SF + VLA A  IK+           GTLNSDEARD DLPL
Sbjct: 61  ETSRRAMLGLVAAGLASG-SFVQVVLADALPIKLGPPPPPSGGLPGTLNSDEARDFDLPL 119

Query: 355 KDRFFLQPLPPSEAVLRAKDSAKDIINVKELIDKKAWPYVQNDLRLKAGYLRYDLNTVIS 176
           K RFFLQPLPP+EA +RAK+SAKDI+ VK LID+KAWPYVQNDLRLKAGYLR+DLNTVIS
Sbjct: 120 KQRFFLQPLPPAEAAVRAKESAKDILGVKSLIDQKAWPYVQNDLRLKAGYLRFDLNTVIS 179

Query: 175 SKPKDEKKLLQDLTGKLFNVISDLDYAAKTKSTPKAEKSYAETVSKLNDVLTKLG 11
           +K KDEKK L++LTGKLF+ IS+LD+AAK KSTP+AEK YA+TVS LNDVL KLG
Sbjct: 180 AKSKDEKKSLKELTGKLFDTISNLDHAAKIKSTPEAEKYYAQTVSSLNDVLAKLG 234


>ref|XP_002317273.1| hypothetical protein POPTRDRAFT_834003 [Populus trichocarpa]
           gi|222860338|gb|EEE97885.1| hypothetical protein
           POPTRDRAFT_834003 [Populus trichocarpa]
          Length = 234

 Score =  277 bits (709), Expect = 2e-72
 Identities = 161/235 (68%), Positives = 179/235 (76%), Gaps = 3/235 (1%)
 Frame = -3

Query: 706 MAQAMASMTGLCGSSQAVLEGSLQLSGSTRLCQA-SNT-RIAVGRPGFVVRAQQ-VSAET 536
           MAQAMASM GL G+SQAVLEGSLQLSGS RL +  SNT R+AV  PG  V+AQQ VSAE 
Sbjct: 1   MAQAMASMAGLRGTSQAVLEGSLQLSGSNRLLKVPSNTARVAVALPGLTVKAQQQVSAEP 60

Query: 535 ETSRRAMXXXXXXXXXXXGSFAKEVLAAATSIKVXXXXXXXXXXXGTLNSDEARDTDLPL 356
           ETSRR M            SF + VLAAA  IKV           GTLNSDEARD  LPL
Sbjct: 61  ETSRRGMLGLVAAGLASG-SFVQAVLAAALPIKVGPPPAPSGGLTGTLNSDEARDLVLPL 119

Query: 355 KDRFFLQPLPPSEAVLRAKDSAKDIINVKELIDKKAWPYVQNDLRLKAGYLRYDLNTVIS 176
           K+RFFLQPLPP+ A  RAK+SAK+II VK LIDKKAWPYVQNDLRLK+ YLRYDLNTVIS
Sbjct: 120 KERFFLQPLPPAAAAARAKESAKEIIGVKGLIDKKAWPYVQNDLRLKSSYLRYDLNTVIS 179

Query: 175 SKPKDEKKLLQDLTGKLFNVISDLDYAAKTKSTPKAEKSYAETVSKLNDVLTKLG 11
           +K KDEKK L++LTGKLF+ IS+LD+AAK KSTP+AEK YA+TVS LNDVL KLG
Sbjct: 180 AKSKDEKKSLKELTGKLFDTISNLDHAAKIKSTPEAEKYYAQTVSALNDVLAKLG 234


>gb|ABK95035.1| unknown [Populus trichocarpa]
          Length = 234

 Score =  277 bits (708), Expect = 3e-72
 Identities = 161/235 (68%), Positives = 178/235 (75%), Gaps = 3/235 (1%)
 Frame = -3

Query: 706 MAQAMASMTGLCGSSQAVLEGSLQLSGSTRLCQA-SNT-RIAVGRPGFVVRAQQ-VSAET 536
           MAQAMASM GL G+SQAVLEGSLQLSGS RL +  SNT R+AV  PG  V+AQQ VSAE 
Sbjct: 1   MAQAMASMAGLRGTSQAVLEGSLQLSGSNRLLKVPSNTARVAVALPGLTVKAQQQVSAEP 60

Query: 535 ETSRRAMXXXXXXXXXXXGSFAKEVLAAATSIKVXXXXXXXXXXXGTLNSDEARDTDLPL 356
           ETSRR M            SF + VLAAA  IKV           GTLNSDEARD  LPL
Sbjct: 61  ETSRRGMLGLVAAGLASG-SFVQAVLAAALPIKVGPPPAPSGGLTGTLNSDEARDLVLPL 119

Query: 355 KDRFFLQPLPPSEAVLRAKDSAKDIINVKELIDKKAWPYVQNDLRLKAGYLRYDLNTVIS 176
           K+RFFLQPLPP+ A  RAK+SAK+II VK LIDKKAWPYVQNDLRLKA YLRYDLNTVIS
Sbjct: 120 KERFFLQPLPPAAAAARAKESAKEIIGVKGLIDKKAWPYVQNDLRLKASYLRYDLNTVIS 179

Query: 175 SKPKDEKKLLQDLTGKLFNVISDLDYAAKTKSTPKAEKSYAETVSKLNDVLTKLG 11
           +K KDEKK L++LTGKLF+ I +LD+AAK KSTP+AEK YA+TVS LNDVL KLG
Sbjct: 180 AKSKDEKKSLKELTGKLFDTIGNLDHAAKIKSTPEAEKYYAQTVSALNDVLAKLG 234


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