BLASTX nr result

ID: Panax21_contig00022135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022135
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-li...   120   9e-26
ref|XP_002319598.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002533223.1| nucleolar protein nop56, putative [Ricinus c...   116   2e-24
ref|XP_004139213.1| PREDICTED: probable nucleolar protein 5-2-li...   111   5e-23
ref|XP_004139212.1| PREDICTED: probable nucleolar protein 5-2-li...   111   5e-23

>ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-like [Vitis vinifera]
          Length = 573

 Score =  120 bits (302), Expect = 9e-26
 Identities = 82/167 (49%), Positives = 93/167 (55%), Gaps = 17/167 (10%)
 Frame = +1

Query: 1   RLRNLEGRELGHSAGSAKGKPKIEFYDKDRKKGAGALITPAKIYNPSADSVLGKTESATV 180
           RLRNLEGRELGHSAGSAKGKPKIE YDKDRKKG+GALIT AK YNP+ADSVLG+ E +  
Sbjct: 392 RLRNLEGRELGHSAGSAKGKPKIEVYDKDRKKGSGALITAAKTYNPAADSVLGRIEDSAA 451

Query: 181 ---EEPAVRKRKNE-EPAQIE---AAPAHDEXXXXXXXXXRAD----------EGIDKPE 309
              EE   +KRK E EP+Q E         +         +AD           G  +PE
Sbjct: 452 REEEEMIPKKRKKEVEPSQPEDTLVVVEEKKEKKEKKKKKKADVEDASLPNDVVGDAEPE 511

Query: 310 TEEVSXXXXXXXXXXXXXXXXXXXNGAENVEAGKKKRKHAENEEETE 450
           +EEV                    N  E  E  KKKRKHAE EEET+
Sbjct: 512 SEEV-VKKEKKKKKKHSAENDELQNEGEAGEKKKKKRKHAEPEEETK 557


>ref|XP_002319598.1| predicted protein [Populus trichocarpa] gi|222857974|gb|EEE95521.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  119 bits (299), Expect = 2e-25
 Identities = 76/159 (47%), Positives = 89/159 (55%), Gaps = 9/159 (5%)
 Frame = +1

Query: 1   RLRNLEGRELGHSAGSAKGKPKIEFYDKDRKKGAGALITPAKIYNPSADSVLGKTESATV 180
           RLRNLEG+ELG SAGSAKGKPKIE YDKDRKKGAG LITPAK YNPSAD++LG+T ++T 
Sbjct: 392 RLRNLEGKELGRSAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPSADAILGQTPNST- 450

Query: 181 EEPAVRKRKNEEPAQIEAAPAHDEXXXXXXXXXRADEGIDKPE------TEEVSXXXXXX 342
                RK + EEPA  + AP   E         R++E    P        ++        
Sbjct: 451 ----ARKVEEEEPA--KEAPVTGEEKKEKKKKKRSEEETAVPSDRNGTAEQDGEAKKEKK 504

Query: 343 XXXXXXXXXXXXXNGAENVEAG---KKKRKHAENEEETE 450
                        N AEN   G   KKKRKHAE EE+ E
Sbjct: 505 KKKKHQAESDGVQNDAENAAEGGKKKKKRKHAEAEEDDE 543


>ref|XP_002533223.1| nucleolar protein nop56, putative [Ricinus communis]
           gi|223526966|gb|EEF29163.1| nucleolar protein nop56,
           putative [Ricinus communis]
          Length = 558

 Score =  116 bits (290), Expect = 2e-24
 Identities = 81/170 (47%), Positives = 93/170 (54%), Gaps = 20/170 (11%)
 Frame = +1

Query: 1   RLRNLEGRELGHSAGSAKGKPKIEFYDKDRKKGAGALITPAKIYNPSADSVLGKTES--- 171
           RLRNLEGRELG SAGSAKGK KIE YDKDRKKGAGAL+  AK YNPSADS+LG+T S   
Sbjct: 392 RLRNLEGRELGRSAGSAKGKTKIEAYDKDRKKGAGALLAAAKTYNPSADSILGQTLSFNT 451

Query: 172 --------ATVEEPAVRKRKNEEPAQIE-----AAPAHDEXXXXXXXXXRADEGIDKPET 312
                    T E P   ++K E+  + +     A  AH               G  +PE 
Sbjct: 452 VNDEEMVPVTEETPVTAEKKKEKKKKKKTDDETALTAH-------------GNGTAQPEA 498

Query: 313 EEVSXXXXXXXXXXXXXXXXXXXNGAENVEAG---KKKRKHAE-NEEETE 450
           EEV+                   NG+ENVE G   KKKRKHAE +EEETE
Sbjct: 499 EEVT-KKDKKKKKKEKADMVEAQNGSENVEEGEKKKKKRKHAEQDEEETE 547


>ref|XP_004139213.1| PREDICTED: probable nucleolar protein 5-2-like isoform 2 [Cucumis
           sativus] gi|449482922|ref|XP_004156444.1| PREDICTED:
           probable nucleolar protein 5-2-like isoform 2 [Cucumis
           sativus]
          Length = 544

 Score =  111 bits (278), Expect = 5e-23
 Identities = 69/154 (44%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
 Frame = +1

Query: 1   RLRNLEGRELGHSAGSAKGKPKIEFYDKDRKKGAGALITPAKIYNPSADSVLGKTESATV 180
           RLR+LEG+ELGH AGSAKGKP+IE YDKDRKK  G LIT AK YNP+ADS+LGK E A  
Sbjct: 392 RLRSLEGKELGHVAGSAKGKPRIEAYDKDRKKSIGGLITAAKTYNPAADSLLGKLEKAIE 451

Query: 181 EE---PAVRKRKNEEPAQIEAAPAHDEXXXXXXXXXRADEGIDKPETEEVSXXXXXXXXX 351
           EE   P   + K E+  + +     ++         + ++   K  TEEV          
Sbjct: 452 EEAEAPVTGQEKKEKKKKKKRVEEEEDSKPEVENVGKDEKKKKKKRTEEVE--------- 502

Query: 352 XXXXXXXXXXNGAENVE-AGKKKRKHAENEEETE 450
                     NG+E  E   KKKRKH E+EEE E
Sbjct: 503 -------EVQNGSEEKEKKKKKKRKHDEDEEEAE 529


>ref|XP_004139212.1| PREDICTED: probable nucleolar protein 5-2-like isoform 1 [Cucumis
           sativus] gi|449482918|ref|XP_004156443.1| PREDICTED:
           probable nucleolar protein 5-2-like isoform 1 [Cucumis
           sativus]
          Length = 566

 Score =  111 bits (278), Expect = 5e-23
 Identities = 69/154 (44%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
 Frame = +1

Query: 1   RLRNLEGRELGHSAGSAKGKPKIEFYDKDRKKGAGALITPAKIYNPSADSVLGKTESATV 180
           RLR+LEG+ELGH AGSAKGKP+IE YDKDRKK  G LIT AK YNP+ADS+LGK E A  
Sbjct: 414 RLRSLEGKELGHVAGSAKGKPRIEAYDKDRKKSIGGLITAAKTYNPAADSLLGKLEKAIE 473

Query: 181 EE---PAVRKRKNEEPAQIEAAPAHDEXXXXXXXXXRADEGIDKPETEEVSXXXXXXXXX 351
           EE   P   + K E+  + +     ++         + ++   K  TEEV          
Sbjct: 474 EEAEAPVTGQEKKEKKKKKKRVEEEEDSKPEVENVGKDEKKKKKKRTEEVE--------- 524

Query: 352 XXXXXXXXXXNGAENVE-AGKKKRKHAENEEETE 450
                     NG+E  E   KKKRKH E+EEE E
Sbjct: 525 -------EVQNGSEEKEKKKKKKRKHDEDEEEAE 551


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