BLASTX nr result

ID: Panax21_contig00022133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022133
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20892.3| unnamed protein product [Vitis vinifera]              399   e-109
ref|XP_002516572.1| conserved hypothetical protein [Ricinus comm...   395   e-108
ref|NP_680221.1| rhomboid-like protein 11 [Arabidopsis thaliana]...   379   e-103
ref|XP_002874277.1| rhomboid family protein [Arabidopsis lyrata ...   376   e-102
ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycin...   374   e-101

>emb|CBI20892.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  399 bits (1025), Expect = e-109
 Identities = 200/274 (72%), Positives = 225/274 (82%), Gaps = 1/274 (0%)
 Frame = -2

Query: 1020 KPCFSSSCITMAMAPSFKFNPLFPKIP-SSSQRYTGINTPLRYQPGRSLFTCKMNGSDMI 844
            +PC +   + M  A     N  F K+P SSS R+T     L      S F CKMNGSD+ 
Sbjct: 11   RPC-TIKLMPMPSASLLPINAAFSKLPTSSSLRFTPPTRLLPISAAPSRFVCKMNGSDLT 69

Query: 843  SQLELGKPEERRKPVKQVNGIFWILLLNIGIYVADHLFQVRGIKVLYLFHNRPSWYQFVT 664
            SQ+ELGK   + KP +QVNGIFWI+LLN+GI+VADHLFQVR IK LYL+HN P+WYQFVT
Sbjct: 70   SQMELGKSGGKWKPQRQVNGIFWIILLNLGIFVADHLFQVRAIKTLYLYHNWPAWYQFVT 129

Query: 663  ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGAGANLVSWLVLPRNAVSV 484
            ATFCHANWNHLSSNLFFLYIFG+LVEEEEGNF LWLSYILTGAGANLVSWLVLPRNAVSV
Sbjct: 130  ATFCHANWNHLSSNLFFLYIFGRLVEEEEGNFGLWLSYILTGAGANLVSWLVLPRNAVSV 189

Query: 483  GASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAARASTNLQGSFRGGYALQ 304
            GASGAVFGLFAISVLVK+SWDWRKILEVLILGQFVIE+VMEAA+AST L G+F GGY++Q
Sbjct: 190  GASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQASTGLSGTFLGGYSIQ 249

Query: 303  SVNHLAHLSGALIGVALVWLLSRVPSHAPERDAS 202
            S+NH+AHLSGALIGV LVWLLSRVPS    ++ S
Sbjct: 250  SINHIAHLSGALIGVLLVWLLSRVPSQPSNQEVS 283


>ref|XP_002516572.1| conserved hypothetical protein [Ricinus communis]
            gi|223544392|gb|EEF45913.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 308

 Score =  395 bits (1016), Expect = e-108
 Identities = 201/286 (70%), Positives = 229/286 (80%), Gaps = 1/286 (0%)
 Frame = -2

Query: 1056 MGXXXXXXLHMQKPCFSSSCITMAMAPSFKFNPLFPKIPSSS-QRYTGINTPLRYQPGRS 880
            MG      L + KP +SS+C+ MA        P    +P ++   Y     P  +    S
Sbjct: 20   MGQLQLQQLSLVKPSYSSTCVPMAS----HIRPFSMSLPKTNFPAYPPCLLP-SFPALHS 74

Query: 879  LFTCKMNGSDMISQLELGKPEERRKPVKQVNGIFWILLLNIGIYVADHLFQVRGIKVLYL 700
             F CKM+GSDMI  LEL KPE RRKP KQ NGIFWI+LLN+GIYVADH FQVRGIK LYL
Sbjct: 75   RFVCKMSGSDMIRPLELDKPEGRRKPQKQANGIFWIILLNLGIYVADHFFQVRGIKSLYL 134

Query: 699  FHNRPSWYQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGAGANLV 520
            +HNRP+WYQF++ATFCHA+W HLSSNLFFLYIFGKLVEEEEGNFALWLSYILTG GANLV
Sbjct: 135  YHNRPTWYQFISATFCHASWEHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLV 194

Query: 519  SWLVLPRNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAARASTN 340
            SWLVLPRNAVSVGASGAVFGLFAISVLVK++WDWRKILEVLILGQFVIE+VMEAA+AS  
Sbjct: 195  SWLVLPRNAVSVGASGAVFGLFAISVLVKITWDWRKILEVLILGQFVIEKVMEAAQASAA 254

Query: 339  LQGSFRGGYALQSVNHLAHLSGALIGVALVWLLSRVPSHAPERDAS 202
            L G+FRGGY +QSVNH+AHLSGALIGV LVWL+SR+P+  P+ +AS
Sbjct: 255  LSGTFRGGYPMQSVNHIAHLSGALIGVVLVWLVSRIPA-PPDHEAS 299


>ref|NP_680221.1| rhomboid-like protein 11 [Arabidopsis thaliana]
           gi|30102632|gb|AAP21234.1| At5g25752 [Arabidopsis
           thaliana] gi|110736074|dbj|BAF00010.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332006096|gb|AED93479.1| rhomboid-like protein 11
           [Arabidopsis thaliana]
          Length = 280

 Score =  379 bits (972), Expect = e-103
 Identities = 185/258 (71%), Positives = 214/258 (82%), Gaps = 3/258 (1%)
 Frame = -2

Query: 972 FKFNPLFPKIPSSSQRYTGINTPLRYQP---GRSLFTCKMNGSDMISQLELGKPEERRKP 802
           F+F PL  +  +SS        PL+++P    RS  TC+ + SD+  Q EL K ++ RKP
Sbjct: 19  FRFPPLHRRRAASSPT-NSTQPPLQFRPLTVSRSQITCRFSQSDITPQFELDKAKDNRKP 77

Query: 801 VKQVNGIFWILLLNIGIYVADHLFQVRGIKVLYLFHNRPSWYQFVTATFCHANWNHLSSN 622
            K+ NGIFWI+L+N+GIY+ADH FQVRGIK LYL+HN P+WYQFVTATFCHANWNHLSSN
Sbjct: 78  QKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTATFCHANWNHLSSN 137

Query: 621 LFFLYIFGKLVEEEEGNFALWLSYILTGAGANLVSWLVLPRNAVSVGASGAVFGLFAISV 442
           LFFLYIFGKLVEEEEGNF LWLSY+ TG GANLVSWLVLPRNAVSVGASGAVFGLFAISV
Sbjct: 138 LFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVGASGAVFGLFAISV 197

Query: 441 LVKMSWDWRKILEVLILGQFVIERVMEAARASTNLQGSFRGGYALQSVNHLAHLSGALIG 262
           LVKMSWDWRKILEVLILGQFVIERVMEAA+AS  L G+  GGY+LQ+VNH+AHLSGAL+G
Sbjct: 198 LVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQTVNHIAHLSGALVG 257

Query: 261 VALVWLLSRVPSHAPERD 208
           V LVWLLS+ PS + ++D
Sbjct: 258 VVLVWLLSKFPSASMDQD 275


>ref|XP_002874277.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320114|gb|EFH50536.1| rhomboid family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 281

 Score =  376 bits (965), Expect = e-102
 Identities = 183/256 (71%), Positives = 212/256 (82%), Gaps = 1/256 (0%)
 Frame = -2

Query: 972 FKFNPLFPKIPSSSQRYTGINTPLR-YQPGRSLFTCKMNGSDMISQLELGKPEERRKPVK 796
           F+F PL  +  +SS   +  +T  R     RS  TC+ + SD+  Q EL K ++ RKP K
Sbjct: 19  FRFPPLHRRRAASSPSNSTESTVFRSLTVSRSQITCRFSQSDITPQFELDKAQDNRKPQK 78

Query: 795 QVNGIFWILLLNIGIYVADHLFQVRGIKVLYLFHNRPSWYQFVTATFCHANWNHLSSNLF 616
           + NGIFWI+L+N+GIYVADH FQVRGIK LYL+HN P+WYQFVTATFCHANWNHLSSNLF
Sbjct: 79  RANGIFWIILINLGIYVADHFFQVRGIKSLYLYHNFPAWYQFVTATFCHANWNHLSSNLF 138

Query: 615 FLYIFGKLVEEEEGNFALWLSYILTGAGANLVSWLVLPRNAVSVGASGAVFGLFAISVLV 436
           FLYIFGKLVEEEEGNF LWLSY+ TG GANLVSWLVLPRNAVSVGASGAVFGLFAISVLV
Sbjct: 139 FLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVGASGAVFGLFAISVLV 198

Query: 435 KMSWDWRKILEVLILGQFVIERVMEAARASTNLQGSFRGGYALQSVNHLAHLSGALIGVA 256
           KMSWDWRKILEVLILGQFV+ERVMEAA+AS  L G+  GGY+LQ+VNH+AHLSGAL+GV 
Sbjct: 199 KMSWDWRKILEVLILGQFVVERVMEAAQASAGLSGTIYGGYSLQTVNHIAHLSGALVGVV 258

Query: 255 LVWLLSRVPSHAPERD 208
           LVWLLS+ PS + +++
Sbjct: 259 LVWLLSKFPSESVDQE 274


>ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycine max]
           gi|255635279|gb|ACU17993.1| unknown [Glycine max]
          Length = 281

 Score =  374 bits (961), Expect = e-101
 Identities = 182/215 (84%), Positives = 198/215 (92%)
 Frame = -2

Query: 870 CKMNGSDMISQLELGKPEERRKPVKQVNGIFWILLLNIGIYVADHLFQVRGIKVLYLFHN 691
           C  N SD++SQLELGKPE++ KP K+VNGIFWI+LLNI I+VADH F+V GIK LYL+HN
Sbjct: 64  CNSNKSDIMSQLELGKPEQKGKPEKRVNGIFWIILLNIAIFVADHFFRVNGIKALYLYHN 123

Query: 690 RPSWYQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGAGANLVSWL 511
            PSWYQFVTATFCHANW HLSSNLFFLYIFGKLVEEEEGNFALWLSYILTG GANLVSWL
Sbjct: 124 WPSWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWL 183

Query: 510 VLPRNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAARASTNLQG 331
           VLPRN VSVGASGAVFGLF+ISVLVKMSWDWRKILEVLILGQFVIE+VMEAA+AST+L G
Sbjct: 184 VLPRNTVSVGASGAVFGLFSISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSG 243

Query: 330 SFRGGYALQSVNHLAHLSGALIGVALVWLLSRVPS 226
             RGGYALQSVNH+AHLSGAL+GV LVWLLS+VPS
Sbjct: 244 --RGGYALQSVNHIAHLSGALVGVLLVWLLSKVPS 276


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