BLASTX nr result

ID: Panax21_contig00022092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022092
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box pr...   173   1e-41
ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box pr...   163   1e-38
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   163   1e-38
ref|XP_002523077.1| Phytochrome A-associated F-box protein, puta...   154   5e-36
ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33

>ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box protein-like [Cucumis
           sativus]
          Length = 379

 Score =  173 bits (438), Expect = 1e-41
 Identities = 91/161 (56%), Positives = 102/161 (63%)
 Frame = +3

Query: 3   LENSDFGLERELGPDENYKDSNLFQLGQTQTIPSSSAPSKIDGXXXXXXXXXXXXXDCAW 182
           LENSDFGLERELGPDENY      Q  Q ++ PSS+A  +++              DCAW
Sbjct: 138 LENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAW 197

Query: 183 SLYDDLYYDTIYNASETLDIISNIQPEITXXXXXXXXXXXXXXXXXXXXXXRKICRSLRS 362
           SLYDDLY DT+YN SE  D++    P+I                       RKICRS+RS
Sbjct: 198 SLYDDLYLDTMYNDSEAPDVLD---PQI--GSTKVEKGVFMTDREFCVSKRRKICRSMRS 252

Query: 363 HLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHIEEK 485
           HLASGVWNLSREQGNKLL SRFRGD LYICDWPGCVHIEEK
Sbjct: 253 HLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEK 293


>ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box protein-like [Vitis
           vinifera]
          Length = 330

 Score =  163 bits (413), Expect = 1e-38
 Identities = 88/162 (54%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3   LENSDFGLERELGPDENYKDSNLFQLGQTQ-TIPSSSAPSKIDGXXXXXXXXXXXXXDCA 179
           LENSDFGLERELGPDE+Y+ +  FQ+     T P+ ++ S  DG              C+
Sbjct: 98  LENSDFGLERELGPDEDYRKAGSFQITVGDATTPAVASSSHHDGNSEVSD-------SCS 150

Query: 180 WSLYDDLYYDTIYNASETLDIISNIQPEITXXXXXXXXXXXXXXXXXXXXXXRKICRSLR 359
           WSL+DDLY+DT+YN SET+D  + I  E+                        K CR LR
Sbjct: 151 WSLFDDLYFDTLYNVSETMDE-TQIGVEVENGAVKVGGDLPVSKTV-------KSCRPLR 202

Query: 360 SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHIEEK 485
           SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVH+EEK
Sbjct: 203 SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHVEEK 244


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  163 bits (413), Expect = 1e-38
 Identities = 88/162 (54%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3   LENSDFGLERELGPDENYKDSNLFQLGQTQ-TIPSSSAPSKIDGXXXXXXXXXXXXXDCA 179
           LENSDFGLERELGPDE+Y+ +  FQ+     T P+ ++ S  DG              C+
Sbjct: 488 LENSDFGLERELGPDEDYRKAGSFQITVGDATTPAVASSSHHDGNSEVSD-------SCS 540

Query: 180 WSLYDDLYYDTIYNASETLDIISNIQPEITXXXXXXXXXXXXXXXXXXXXXXRKICRSLR 359
           WSL+DDLY+DT+YN SET+D  + I  E+                        K CR LR
Sbjct: 541 WSLFDDLYFDTLYNVSETMDE-TQIGVEVENGAVKVGGDLPVSKTV-------KSCRPLR 592

Query: 360 SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHIEEK 485
           SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVH+EEK
Sbjct: 593 SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHVEEK 634


>ref|XP_002523077.1| Phytochrome A-associated F-box protein, putative [Ricinus communis]
           gi|223537639|gb|EEF39262.1| Phytochrome A-associated
           F-box protein, putative [Ricinus communis]
          Length = 332

 Score =  154 bits (390), Expect = 5e-36
 Identities = 83/161 (51%), Positives = 97/161 (60%)
 Frame = +3

Query: 3   LENSDFGLERELGPDENYKDSNLFQLGQTQTIPSSSAPSKIDGXXXXXXXXXXXXXDCAW 182
           LE+SDFGLERELGPD+NY  +++ +   +Q  P        D              DC+W
Sbjct: 95  LEHSDFGLERELGPDDNYHKTSVSRTTSSQPPPPPPPGPSSD---CSNTNNNTQNNDCSW 151

Query: 183 SLYDDLYYDTIYNASETLDIISNIQPEITXXXXXXXXXXXXXXXXXXXXXXRKICRSLRS 362
           SL+DDLYYDTIY+ SE+ D+  +                            RKI RSLRS
Sbjct: 152 SLFDDLYYDTIYDVSESEDVNGSAD------VVSINRDDKTVLKGGGVCKRRKISRSLRS 205

Query: 363 HLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHIEEK 485
           HLASGVWNLSREQGNKLLASRFRGD LYICDWPGCVH+EEK
Sbjct: 206 HLASGVWNLSREQGNKLLASRFRGDSLYICDWPGCVHMEEK 246


>ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|222844435|gb|EEE81982.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  146 bits (368), Expect = 2e-33
 Identities = 83/165 (50%), Positives = 95/165 (57%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   LENSDFGLERELGPDENYKDSNLFQLGQTQTIPSSSAPSKIDGXXXXXXXXXXXXXDCAW 182
           LE+SDFGLERELGPD+ +  S      Q Q   +S + S +D              D +W
Sbjct: 95  LEHSDFGLERELGPDDYFHKSKNTPSQQPQQ--ASHSGSNLD------------KRDSSW 140

Query: 183 SLYDDLYYDTIYNASETLDIISNI----QPEITXXXXXXXXXXXXXXXXXXXXXXRKICR 350
           SL+DDLYYDT+YN  E+ D  +      +  I                       RKICR
Sbjct: 141 SLFDDLYYDTVYNVYESQDAATVSCEAKEEVIGGNDDKSVDIFVKARGISSVGKRRKICR 200

Query: 351 SLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHIEEK 485
           SL SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGC HI EK
Sbjct: 201 SLSSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCAHITEK 245


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