BLASTX nr result

ID: Panax21_contig00022085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022085
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating en...   148   4e-34
gb|ACB12194.1| PHO2 [Nicotiana benthamiana]                           127   9e-28
ref|XP_002329823.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002519066.1| ubiquitin conjugating enzyme, putative [Rici...   123   1e-26
ref|XP_003593574.1| Ubiquitin-conjugating enzyme family protein ...   117   1e-24

>ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Vitis
           vinifera] gi|297735992|emb|CBI23966.3| unnamed protein
           product [Vitis vinifera]
          Length = 944

 Score =  148 bits (374), Expect = 4e-34
 Identities = 69/120 (57%), Positives = 94/120 (78%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   LDSHSLFPINIIDAHDFWPDQFVVEKSS-DDLHVTDIQRWGVVKSVDAKERTVRVKWESS 179
           LD  SLFPINI+DAH+FWP+QFV+EK + DD +V+  QRWGVV+ VDAKER V+VKW++ 
Sbjct: 319 LDPQSLFPINIVDAHEFWPEQFVLEKGTCDDPNVSSSQRWGVVEVVDAKERIVKVKWKNF 378

Query: 180 TINQATDLEGEGMEEIVSAYELVEHPEYTYCLGDVVFGMHKSQFLDVAGGKSYKYHATSK 359
            +N+  DLE   MEE VSAYELVEHP+Y+YCLGD VF + ++Q +D A G+++  +A ++
Sbjct: 379 ALNEGNDLEEGLMEETVSAYELVEHPDYSYCLGDFVFRLERNQLVDQADGQNFNNNAIAE 438


>gb|ACB12194.1| PHO2 [Nicotiana benthamiana]
          Length = 921

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   LDSHSLFPINIIDAHDFWPDQFVVEKS-SDDLHVTDIQRWGVVKSVDAKERTVRVKWESS 179
           LDS S+FP+N++DAH+FWP+QFV+EK   DD  V   +RWGVV+ VDAKERTV+VKW + 
Sbjct: 316 LDSDSVFPVNVVDAHEFWPEQFVLEKGYCDDSSVPSPKRWGVVRCVDAKERTVKVKWTTF 375

Query: 180 TINQATDLEGEGMEEIVSAYELVEHPEYTYCLGDVVFGMHKSQFLDVAGGKSY 338
           ++N+      E  EEIVSAYEL++HP+Y+YC GD V    + Q   + G   Y
Sbjct: 376 SLNEPNKFGVEQTEEIVSAYELMDHPDYSYCFGDAVCKFCEDQVFSLDGKSMY 428


>ref|XP_002329823.1| predicted protein [Populus trichocarpa] gi|222870885|gb|EEF08016.1|
           predicted protein [Populus trichocarpa]
          Length = 924

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/97 (60%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   LDSHSLFPINIIDAHDFWPDQFVVEKSS-DDLHVTDIQRWGVVKSVDAKERTVRVKWESS 179
           LDS SL P+NI++AHDFWP QFV+EK + DD HV+  Q+WGVV  VDAKERTV VKW+  
Sbjct: 318 LDSQSLLPVNIVNAHDFWPGQFVLEKGACDDPHVSGNQKWGVVNCVDAKERTVMVKWKFI 377

Query: 180 TINQATDLEGEGMEEIVSAYELVEHPEYTYCLGDVVF 290
            +NQ  ++    +EE VSAYELVEHP+Y+Y  GD+VF
Sbjct: 378 GVNQVNNVGSGQIEETVSAYELVEHPDYSYSYGDIVF 414


>ref|XP_002519066.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
           gi|223541729|gb|EEF43277.1| ubiquitin conjugating
           enzyme, putative [Ricinus communis]
          Length = 925

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/99 (57%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
 Frame = +3

Query: 3   LDSHSLFPINIIDAHDFWPDQFVVEKSS-DDLHVTDIQRWGVVKSVDAKERTVRVKWESS 179
           LDSHSL P+N+++AH+FWP Q+VVEK + DD +V D ++WGVV +VDAKERTV+VKW  +
Sbjct: 312 LDSHSLLPVNVVNAHEFWPGQYVVEKGACDDPNVPDNRKWGVVSAVDAKERTVKVKWRLT 371

Query: 180 TINQATDLEGE--GMEEIVSAYELVEHPEYTYCLGDVVF 290
             NQA D+        E VSAYELVE+P+++YC GD+VF
Sbjct: 372 VANQANDVGSNLVSQGETVSAYELVEYPDFSYCYGDIVF 410


>ref|XP_003593574.1| Ubiquitin-conjugating enzyme family protein [Medicago truncatula]
           gi|355482622|gb|AES63825.1| Ubiquitin-conjugating enzyme
           family protein [Medicago truncatula]
          Length = 954

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/127 (45%), Positives = 81/127 (63%)
 Frame = +3

Query: 6   DSHSLFPINIIDAHDFWPDQFVVEKSSDDLHVTDIQRWGVVKSVDAKERTVRVKWESSTI 185
           D  +L P+N+I+ H+FWP QFV+EK + D   +  QRWGV+ SVDAKE TV V+W ++  
Sbjct: 315 DPQNLVPVNVINTHEFWPHQFVMEKGTSDDDKSSNQRWGVILSVDAKEHTVNVQWRTAPT 374

Query: 186 NQATDLEGEGMEEIVSAYELVEHPEYTYCLGDVVFGMHKSQFLDVAGGKSYKYHATSKGF 365
           ++  DL GE   E VSAYELVEHP+++ C GD+VF   + Q     G  + KY+A S   
Sbjct: 375 SKPDDLAGEPTTETVSAYELVEHPDFSCCFGDIVFKAAQKQ----PGYLAEKYNANSMSD 430

Query: 366 MDEAAVL 386
           ++  A L
Sbjct: 431 LNVEAPL 437


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