BLASTX nr result

ID: Panax21_contig00022067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022067
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containin...   440   e-121
emb|CBI16305.3| unnamed protein product [Vitis vinifera]              422   e-116
ref|XP_004161655.1| PREDICTED: zinc finger CCCH domain-containin...   408   e-111
ref|XP_004145739.1| PREDICTED: zinc finger CCCH domain-containin...   408   e-111
ref|XP_002314271.1| predicted protein [Populus trichocarpa] gi|2...   382   e-103

>ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containing protein 24-like [Vitis
            vinifera]
          Length = 843

 Score =  440 bits (1132), Expect = e-121
 Identities = 216/333 (64%), Positives = 262/333 (78%), Gaps = 10/333 (3%)
 Frame = -3

Query: 969  IEAGEKRKRTEPESETEPAGEKEKHPLWKTSVCSYFRRTGGLCSHGETCRYAHGEEELRQ 790
            IE+GEKRKR++P        +  +HPLWKTS+CSYFR   G CSHG+ CRYAHGEEELRQ
Sbjct: 48   IESGEKRKRSDPADS-----DNCRHPLWKTSLCSYFRSHSGSCSHGDACRYAHGEEELRQ 102

Query: 789  RPDKTWDPTSERAKKLLKAENGERVDHSAKKESNKGDDEVLMTEAIAEGSNSDLGLQKCL 610
            RPD TWDPTSERAKKLLK+E+GE+ D          +D+V+MTEA+ +   +D GL KCL
Sbjct: 103  RPDNTWDPTSERAKKLLKSESGEKCDSK--------EDDVMMTEAVVDDDCADPGLSKCL 154

Query: 609  VNLPMKWSSDNLRSFLSEQGIHYKSAKKKKGMIVGFVSFETAEQLKSGVEELDGKSLGNK 430
            ++LP KW SD LR FL +QG+ YKSAKKKKGM++GFV+FE+AEQLK+ +EEL+GKS+GNK
Sbjct: 155  LHLPPKWHSDQLRDFLGQQGVIYKSAKKKKGMMIGFVTFESAEQLKNAMEELEGKSIGNK 214

Query: 429  NLKVADVIPRTFEKKKQGEMPPPQSTE----------NSEVSKSSNGIEDGDSIDDDTST 280
            NLKV D++PR+FEKK    +P  QST+          +++VS SS G+EDGD++ D  S+
Sbjct: 215  NLKVGDILPRSFEKKNNSALPLHQSTQKNMETALGGDDTDVSMSSFGLEDGDAVCD--SS 272

Query: 279  PGSSILKGRSARDVVTPLAHMSYVDQLDHKKNSLAQTLKKLTRNARKACPNGVSLPDWIL 100
               S+LK RSARDV TPLAH++Y DQL+HKKNSL QTLKKLTRNARKACPNGVSLP+WIL
Sbjct: 273  ASDSVLKARSARDVATPLAHLTYTDQLEHKKNSLMQTLKKLTRNARKACPNGVSLPEWIL 332

Query: 99   NSREIGGLPCKLEGIVESPLVNGYRNKCEFSVG 1
             SREIGGLPCK EGI+ESPLVNGYRNKCEFSVG
Sbjct: 333  KSREIGGLPCKFEGILESPLVNGYRNKCEFSVG 365


>emb|CBI16305.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  422 bits (1086), Expect = e-116
 Identities = 206/323 (63%), Positives = 248/323 (76%)
 Frame = -3

Query: 969 IEAGEKRKRTEPESETEPAGEKEKHPLWKTSVCSYFRRTGGLCSHGETCRYAHGEEELRQ 790
           IE+GEKRKR++P        +  +HPLWKTS+CSYFR   G CSHG+ CRYAHGEEELRQ
Sbjct: 48  IESGEKRKRSDPADS-----DNCRHPLWKTSLCSYFRSHSGSCSHGDACRYAHGEEELRQ 102

Query: 789 RPDKTWDPTSERAKKLLKAENGERVDHSAKKESNKGDDEVLMTEAIAEGSNSDLGLQKCL 610
           RPD TWDPTSERAKKLLK+E+GE+ D          +D+V+MTEA+ +   +D GL KCL
Sbjct: 103 RPDNTWDPTSERAKKLLKSESGEKCDSK--------EDDVMMTEAVVDDDCADPGLSKCL 154

Query: 609 VNLPMKWSSDNLRSFLSEQGIHYKSAKKKKGMIVGFVSFETAEQLKSGVEELDGKSLGNK 430
           ++LP KW SD LR FL +QG+ YKSAKKKKGM++GFV+FE+AEQLK+ +EEL+GKS+GNK
Sbjct: 155 LHLPPKWHSDQLRDFLGQQGVIYKSAKKKKGMMIGFVTFESAEQLKNAMEELEGKSIGNK 214

Query: 429 NLKVADVIPRTFEKKKQGEMPPPQSTENSEVSKSSNGIEDGDSIDDDTSTPGSSILKGRS 250
           NLKV D++PR+FEKK    +P  QST+ +                 +T+    S+LK RS
Sbjct: 215 NLKVGDILPRSFEKKNNSALPLHQSTQKNM----------------ETALASDSVLKARS 258

Query: 249 ARDVVTPLAHMSYVDQLDHKKNSLAQTLKKLTRNARKACPNGVSLPDWILNSREIGGLPC 70
           ARDV TPLAH++Y DQL+HKKNSL QTLKKLTRNARKACPNGVSLP+WIL SREIGGLPC
Sbjct: 259 ARDVATPLAHLTYTDQLEHKKNSLMQTLKKLTRNARKACPNGVSLPEWILKSREIGGLPC 318

Query: 69  KLEGIVESPLVNGYRNKCEFSVG 1
           K EGI+ESPLVNGYRNKCEFSVG
Sbjct: 319 KFEGILESPLVNGYRNKCEFSVG 341


>ref|XP_004161655.1| PREDICTED: zinc finger CCCH domain-containing protein 24-like
            [Cucumis sativus]
          Length = 889

 Score =  408 bits (1048), Expect = e-111
 Identities = 206/330 (62%), Positives = 252/330 (76%), Gaps = 9/330 (2%)
 Frame = -3

Query: 963  AGEKRKRTEPESET-EPAGEKEKHPLWKTSVCSYFRRTGGLCSHGETCRYAHGEEELRQR 787
            AGEKRKRT+P+S+  +P  +   +PLWKTS+CSYFRR  G CSHG  CRYAHGEEELRQR
Sbjct: 60   AGEKRKRTDPDSDAAKPNPDPSTNPLWKTSLCSYFRRHSGSCSHGIECRYAHGEEELRQR 119

Query: 786  PDKTWDPTSERAKKLLKAENGERVDHSAKKESNKGDDEVLMTEAIAEGSNSDLG------ 625
            PDK+WDPTSERAKK++K   GE V           ++EV+MTE + +  + ++G      
Sbjct: 120  PDKSWDPTSERAKKVMKV--GEEVK----------EEEVMMTEVVVDDDDDEVGNDGRDN 167

Query: 624  -LQKCLVNLPMKWSSDNLRSFLSEQGIHYKSAKKKKGMIVGFVSFETAEQLKSGVEELDG 448
             L KCLV+LP KW+SDNLR++L+E  + +KSAKKKKGM VGFVSFE+ EQL+S VEEL G
Sbjct: 168  ELTKCLVHLPTKWNSDNLRNYLNELSVLFKSAKKKKGMTVGFVSFESTEQLRSSVEELQG 227

Query: 447  KSLGNKNLKVADVIPRTFEKKKQGEMPPPQSTENSEV-SKSSNGIEDGDSIDDDTSTPGS 271
            K +G KNLKVADVIPR+FEKK +  +    S+ +S   S SSN  ED  +I+D +STP  
Sbjct: 228  KIIGKKNLKVADVIPRSFEKKIKSSIDCDNSSVSSAAFSLSSNDGEDAGNINDGSSTPND 287

Query: 270  SILKGRSARDVVTPLAHMSYVDQLDHKKNSLAQTLKKLTRNARKACPNGVSLPDWILNSR 91
            S+LKG+SAR+VV PLAHMSY DQLDHKKNSL   LKKLTRNARKACP+GVSLP+WIL SR
Sbjct: 288  SVLKGKSAREVVAPLAHMSYSDQLDHKKNSLLHVLKKLTRNARKACPHGVSLPEWILKSR 347

Query: 90   EIGGLPCKLEGIVESPLVNGYRNKCEFSVG 1
            +IGG+ C  EGI+ESP++NGYRNKCEFSVG
Sbjct: 348  DIGGIACSFEGIIESPIINGYRNKCEFSVG 377


>ref|XP_004145739.1| PREDICTED: zinc finger CCCH domain-containing protein 24-like
            [Cucumis sativus]
          Length = 889

 Score =  408 bits (1048), Expect = e-111
 Identities = 206/330 (62%), Positives = 252/330 (76%), Gaps = 9/330 (2%)
 Frame = -3

Query: 963  AGEKRKRTEPESET-EPAGEKEKHPLWKTSVCSYFRRTGGLCSHGETCRYAHGEEELRQR 787
            AGEKRKRT+P+S+  +P  +   +PLWKTS+CSYFRR  G CSHG  CRYAHGEEELRQR
Sbjct: 60   AGEKRKRTDPDSDAAKPNPDPSTNPLWKTSLCSYFRRHSGSCSHGIECRYAHGEEELRQR 119

Query: 786  PDKTWDPTSERAKKLLKAENGERVDHSAKKESNKGDDEVLMTEAIAEGSNSDLG------ 625
            PDK+WDPTSERAKK++K   GE V           ++EV+MTE + +  + ++G      
Sbjct: 120  PDKSWDPTSERAKKVMKV--GEEVK----------EEEVMMTEVVVDDDDDEVGNDGRDN 167

Query: 624  -LQKCLVNLPMKWSSDNLRSFLSEQGIHYKSAKKKKGMIVGFVSFETAEQLKSGVEELDG 448
             L KCLV+LP KW+SDNLR++L+E  + +KSAKKKKGM VGFVSFE+ EQL+S VEEL G
Sbjct: 168  ELTKCLVHLPTKWNSDNLRNYLNELSVLFKSAKKKKGMTVGFVSFESTEQLRSSVEELQG 227

Query: 447  KSLGNKNLKVADVIPRTFEKKKQGEMPPPQSTENSEV-SKSSNGIEDGDSIDDDTSTPGS 271
            K +G KNLKVADVIPR+FEKK +  +    S+ +S   S SSN  ED  +I+D +STP  
Sbjct: 228  KIIGKKNLKVADVIPRSFEKKIKSSIDCDNSSVSSAAFSLSSNDGEDAGNINDGSSTPND 287

Query: 270  SILKGRSARDVVTPLAHMSYVDQLDHKKNSLAQTLKKLTRNARKACPNGVSLPDWILNSR 91
            S+LKG+SAR+VV PLAHMSY DQLDHKKNSL   LKKLTRNARKACP+GVSLP+WIL SR
Sbjct: 288  SVLKGKSAREVVAPLAHMSYSDQLDHKKNSLLHVLKKLTRNARKACPHGVSLPEWILKSR 347

Query: 90   EIGGLPCKLEGIVESPLVNGYRNKCEFSVG 1
            +IGG+ C  EGI+ESP++NGYRNKCEFSVG
Sbjct: 348  DIGGIACSFEGIIESPIINGYRNKCEFSVG 377


>ref|XP_002314271.1| predicted protein [Populus trichocarpa] gi|222850679|gb|EEE88226.1|
            predicted protein [Populus trichocarpa]
          Length = 830

 Score =  382 bits (980), Expect = e-103
 Identities = 203/355 (57%), Positives = 243/355 (68%), Gaps = 10/355 (2%)
 Frame = -3

Query: 1035 PQPPNISNRQSSAVAQPTEEIEIEAGEKRKR-----TEPESETEPAGEKEKHPLWKTSVC 871
            P PP     Q    +   ++     GEKRKR     T  E+ETE   +   +P  KTS+C
Sbjct: 7    PIPPE----QQIQPSNNQDDTATTTGEKRKREKTTTTTTEAETETETDPSLNPFHKTSLC 62

Query: 870  SYFRR-TGGLCSHGETCRYAHGEEELRQRPDKTWDPTSERAKKLLKAENGERVDHSAKKE 694
            SYFRR  G  CSHG  C+YAHGEEELR RPD TWDPTSERAKK +K +     D   + E
Sbjct: 63   SYFRRHMGASCSHGSACKYAHGEEELRPRPDNTWDPTSERAKKAIKLDTTNNNDSKEEDE 122

Query: 693  SNKGDDEVLMTEAIAEGSNS----DLGLQKCLVNLPMKWSSDNLRSFLSEQGIHYKSAKK 526
                D+E++MT+  A+G       D GL KCLV+LP KW SD+LR FLS+QGI +KSAKK
Sbjct: 123  ----DEEIMMTDIAADGDGDGGCLDTGLSKCLVHLPRKWLSDHLRKFLSDQGILFKSAKK 178

Query: 525  KKGMIVGFVSFETAEQLKSGVEELDGKSLGNKNLKVADVIPRTFEKKKQGEMPPPQSTEN 346
            KKGM VGF+SFE AEQLK  +EEL+G+S+GNKN+KVADVIPR FE+K +  M  PQ+   
Sbjct: 179  KKGMSVGFLSFEDAEQLKKAIEELEGRSIGNKNIKVADVIPRQFEQKIKSAMAAPQNIPQ 238

Query: 345  SEVSKSSNGIEDGDSIDDDTSTPGSSILKGRSARDVVTPLAHMSYVDQLDHKKNSLAQTL 166
            + +  + +G   G S   D      S  + + ARDV TPLAHM Y DQL+HKKNS+ Q L
Sbjct: 239  T-MEPALDGENAGISRPSDAIGDDGSSSQAKCARDVATPLAHMPYDDQLEHKKNSIMQML 297

Query: 165  KKLTRNARKACPNGVSLPDWILNSREIGGLPCKLEGIVESPLVNGYRNKCEFSVG 1
            KKLTRNARKACPNGVSLP+WIL SREIGGLPC+LEGI+ESPL NGYRNKCEFSVG
Sbjct: 298  KKLTRNARKACPNGVSLPEWILKSREIGGLPCELEGILESPLRNGYRNKCEFSVG 352


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