BLASTX nr result

ID: Panax21_contig00022047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022047
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21294.1| DND1-like protein [Solanum tuberosum]                  252   3e-65
gb|AAX18166.2| CNGC2 [Gossypium hirsutum]                             243   1e-62
ref|XP_002284164.1| PREDICTED: cyclic nucleotide-gated ion chann...   228   5e-58
ref|XP_002532894.1| Cyclic nucleotide-gated ion channel, putativ...   219   3e-55
ref|NP_197045.1| cyclic nucleotide-gated ion channel 2 [Arabidop...   209   4e-52

>gb|AAU21294.1| DND1-like protein [Solanum tuberosum]
          Length = 186

 Score =  252 bits (644), Expect = 3e-65
 Identities = 125/163 (76%), Positives = 137/163 (84%)
 Frame = -1

Query: 490 SRWIGLFRCRTTQSGNIDGVDDDCNPISNSVECYACTQVGLPVFHSTSCDQAHQPEWEAS 311
           SRW G+FR R+ Q  N D  DDD NPISNS+ECYACTQVG+PVFHSTSCD A+QPEWEAS
Sbjct: 12  SRWFGIFRRRSVQPDNSDDNDDDNNPISNSIECYACTQVGVPVFHSTSCDGANQPEWEAS 71

Query: 310 AGSSLVPIQARSVHQAITTPKDRSGGYRRDSGPFGRVLDPRSKRVQKWNRVFLLARGMAL 131
           AGSSL+PIQ R+    + T K RS   R  SGPFGRVLDPRSKRVQ+WNR+ LLARGMAL
Sbjct: 72  AGSSLIPIQNRT---DLKTGKSRSSRSRHTSGPFGRVLDPRSKRVQRWNRMILLARGMAL 128

Query: 130 AVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTFLDAVHLF 2
           AVD LFFYALSIGRGGSPCLYMDGGLAAIVTV+RT +DAVHLF
Sbjct: 129 AVDSLFFYALSIGRGGSPCLYMDGGLAAIVTVIRTSVDAVHLF 171


>gb|AAX18166.2| CNGC2 [Gossypium hirsutum]
          Length = 715

 Score =  243 bits (621), Expect = 1e-62
 Identities = 120/168 (71%), Positives = 136/168 (80%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 SRWIGLFRC-----RTTQSGNIDGVDDDCNPISNSVECYACTQVGLPVFHSTSCDQAHQP 326
           SRW GLF+        + +G++ G  ++ NPIS +VECYACTQVG+PVFHSTSCDQAH P
Sbjct: 10  SRWFGLFQLPNSMPERSDNGSVSGEGNEENPISYTVECYACTQVGVPVFHSTSCDQAHPP 69

Query: 325 EWEASAGSSLVPIQARSVHQAITTPKDRSGGYRRDSGPFGRVLDPRSKRVQKWNRVFLLA 146
           EWEASAGSSLVPIQAR+  +   T +  +   RR SGPFGRVLDPR+KRVQ WNR FLLA
Sbjct: 70  EWEASAGSSLVPIQARTASKQKKTQQPAAPNTRRPSGPFGRVLDPRTKRVQNWNRAFLLA 129

Query: 145 RGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTFLDAVHLF 2
           R MALA+DPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRT +DAVHLF
Sbjct: 130 RAMALAIDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTCVDAVHLF 177


>ref|XP_002284164.1| PREDICTED: cyclic nucleotide-gated ion channel 2 [Vitis vinifera]
           gi|296082976|emb|CBI22277.3| unnamed protein product
           [Vitis vinifera]
          Length = 701

 Score =  228 bits (582), Expect = 5e-58
 Identities = 120/178 (67%), Positives = 133/178 (74%)
 Frame = -1

Query: 535 PIMPISIPELHPLLHSRWIGLFRCRTTQSGNIDGVDDDCNPISNSVECYACTQVGLPVFH 356
           P   IS+P        RWIG+FR R   S   +  ++D  PISNS+ECYACTQVG+PVFH
Sbjct: 5   PNFQISLP--------RWIGIFRRRKANSD--ENYEEDDGPISNSIECYACTQVGVPVFH 54

Query: 355 STSCDQAHQPEWEASAGSSLVPIQARSVHQAITTPKDRSGGYRRDSGPFGRVLDPRSKRV 176
           STSCDQAHQPEWEASAGSSL+PIQ R       T K RS G  R SGPFG VLDPR+K V
Sbjct: 55  STSCDQAHQPEWEASAGSSLIPIQDRR------TGKARSNG--RPSGPFGPVLDPRTKPV 106

Query: 175 QKWNRVFLLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTFLDAVHLF 2
           Q+WNR FLL RGM+LAVDPLFFY +SIG  G PCLYMDGGLAAIVTVLRT +DAVHLF
Sbjct: 107 QRWNRAFLLVRGMSLAVDPLFFYVISIGGEGGPCLYMDGGLAAIVTVLRTCVDAVHLF 164


>ref|XP_002532894.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223527328|gb|EEF29474.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 715

 Score =  219 bits (558), Expect = 3e-55
 Identities = 119/180 (66%), Positives = 134/180 (74%), Gaps = 8/180 (4%)
 Frame = -1

Query: 520 SIPELHPLLHSRWIGLFRCRTTQSGNID--GVD------DDCNPISNSVECYACTQVGLP 365
           S P+ H  L  RWIGL   +  Q+ N D  G D      DD N IS+SVECYACTQVG+P
Sbjct: 3   SQPDFHFSLQ-RWIGLLCGKNGQNDNSDSSGGDSTVRNIDDNNNISSSVECYACTQVGVP 61

Query: 364 VFHSTSCDQAHQPEWEASAGSSLVPIQARSVHQAITTPKDRSGGYRRDSGPFGRVLDPRS 185
           VFHSTSCD AHQP+W ASAGSSL+PIQ +   +   T   R       +GPFG VLDPRS
Sbjct: 62  VFHSTSCDHAHQPQWVASAGSSLIPIQNQPGAKKPPTIISRF-----PAGPFGAVLDPRS 116

Query: 184 KRVQKWNRVFLLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTFLDAVHL 5
           KRVQKWNR FLLARGMALA+DPLFFY+LSIGRGG+PCLYMDGGLAAIVTVLRT +DA+HL
Sbjct: 117 KRVQKWNRAFLLARGMALAIDPLFFYSLSIGRGGAPCLYMDGGLAAIVTVLRTCVDAIHL 176


>ref|NP_197045.1| cyclic nucleotide-gated ion channel 2 [Arabidopsis thaliana]
           gi|38502856|sp|O65718.1|CNGC2_ARATH RecName: Full=Cyclic
           nucleotide-gated ion channel 2; Short=AtCNGC2; AltName:
           Full=Cyclic nucleotide- and calmodulin-regulated ion
           channel 2; AltName: Full=Protein DEFENSE NO DEATH 1
           gi|9255920|gb|AAF86351.1|AF280939_1 DND1 [Arabidopsis
           thaliana] gi|3096949|emb|CAA76179.1| putative cyclic
           nucleotide-regulated ion channel [Arabidopsis thaliana]
           gi|3894399|gb|AAC78613.1| cyclic nucleotide-gated cation
           channel [Arabidopsis thaliana]
           gi|9755796|emb|CAC01740.1| cyclic nucleotide-gated
           cation channel [Arabidopsis thaliana]
           gi|332004775|gb|AED92158.1| cyclic nucleotide-gated ion
           channel 2 [Arabidopsis thaliana]
          Length = 726

 Score =  209 bits (531), Expect = 4e-52
 Identities = 115/183 (62%), Positives = 124/183 (67%), Gaps = 15/183 (8%)
 Frame = -1

Query: 505 HPLLHSRWIGLF----RCRTT----------QSGNIDGVDDDCNPISNSVECYACTQVGL 368
           HP    RWIGLF    R +TT            G+      D  P+ +SVECYACTQVG+
Sbjct: 4   HPNFIFRWIGLFSDKFRRQTTGIDENSNLQINGGDSSSSGSDETPVLSSVECYACTQVGV 63

Query: 367 PVFHSTSCDQAHQPEWEASAGSSLVPIQARSVHQAITTPKDRSGGYRRDSGPFGRVLDPR 188
           P FHSTSCDQAH PEW ASAGSSLVPIQ  SV      P      +RR  GPFG VLDPR
Sbjct: 64  PAFHSTSCDQAHAPEWRASAGSSLVPIQEGSV------PNPARTRFRRLKGPFGEVLDPR 117

Query: 187 SKRVQKWNRVFLLARGMALAVDPLFFYALSIGRGGSP-CLYMDGGLAAIVTVLRTFLDAV 11
           SKRVQ+WNR  LLARGMALAVDPLFFYALSIGR   P CLYMDG  AA+VTVLRT LDAV
Sbjct: 118 SKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVLRTCLDAV 177

Query: 10  HLF 2
           HL+
Sbjct: 178 HLW 180


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