BLASTX nr result

ID: Panax21_contig00022046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022046
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22661.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine l...   251   3e-64
dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitre...   158   2e-36
ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Sela...   158   2e-36
ref|XP_001776739.1| predicted protein [Physcomitrella patens sub...   158   2e-36

>emb|CBI22661.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  271 bits (694), Expect = 2e-70
 Identities = 147/215 (68%), Positives = 165/215 (76%)
 Frame = -3

Query: 1071 GSDYKLCPRGRKVANIRPQIPGMPNVPNSLAVIATVSAPPRDYRPLYQSIKYVRFPLNNF 892
            GSD+ LC RG  VANI  QIPG+ NV NSLAVIATV A   D R  Y+SI  V+  LNNF
Sbjct: 331  GSDFVLCHRGYPVANITLQIPGVHNVLNSLAVIATVMALVSDGRQSYESINCVKIHLNNF 390

Query: 891  QGVSRRFEMIGRIHECHIYDDYASPPTEVRAVLQAARQRFPCKDIVVVFQPHTYSRVAAL 712
             GVSRRFE+IG +  C IYDDYA  PTEVRAVLQAARQRFP K ++VVFQPHTYSR+AAL
Sbjct: 391  VGVSRRFELIGTVCGCLIYDDYAHHPTEVRAVLQAARQRFPLKALLVVFQPHTYSRLAAL 450

Query: 711  GREFATAFSDADEVIVTEIYAARETNVWNVSGRDLANSIINHRSEYVPTLVF**CTFKYL 532
              +FATAFSDAD+V+VTEIYAARETNVWNVSG+DLA SII   SEY+P+L        + 
Sbjct: 451  KSDFATAFSDADQVLVTEIYAARETNVWNVSGKDLATSIIGPPSEYIPSLGDVVDKLAHQ 510

Query: 531  VSLSPDRELVVLTLGAGDITTVGRVLLHQLQQRAQ 427
            +SL PDRE VV TLGAGDITTVG  LLH+LQ R Q
Sbjct: 511  ISLEPDRETVVFTLGAGDITTVGPKLLHELQGRLQ 545


>ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
            vinifera]
          Length = 541

 Score =  251 bits (640), Expect = 3e-64
 Identities = 135/201 (67%), Positives = 154/201 (76%)
 Frame = -3

Query: 1071 GSDYKLCPRGRKVANIRPQIPGMPNVPNSLAVIATVSAPPRDYRPLYQSIKYVRFPLNNF 892
            GSD+ LC RG  VANI  QIPG+ NV NSLAVIATV A   D R  Y+SI  V+  LNNF
Sbjct: 304  GSDFVLCHRGYPVANITLQIPGVHNVLNSLAVIATVMALVSDGRQSYESINCVKIHLNNF 363

Query: 891  QGVSRRFEMIGRIHECHIYDDYASPPTEVRAVLQAARQRFPCKDIVVVFQPHTYSRVAAL 712
             GVSRRFE+IG +  C IYDDYA  PTEVRAVLQAARQRFP K ++VVFQPHTYSR+AAL
Sbjct: 364  VGVSRRFELIGTVCGCLIYDDYAHHPTEVRAVLQAARQRFPLKALLVVFQPHTYSRLAAL 423

Query: 711  GREFATAFSDADEVIVTEIYAARETNVWNVSGRDLANSIINHRSEYVPTLVF**CTFKYL 532
              +FATAFSDAD+V+VTEIYAARETNVWNVSG+DLA SII   SEY+P+L        + 
Sbjct: 424  KSDFATAFSDADQVLVTEIYAARETNVWNVSGKDLATSIIGPPSEYIPSLGDVVDKLAHQ 483

Query: 531  VSLSPDRELVVLTLGAGDITT 469
            +SL PDRE VV TLGAG++ T
Sbjct: 484  ISLEPDRETVVFTLGAGNMQT 504


>dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitrella patens]
          Length = 615

 Score =  158 bits (400), Expect = 2e-36
 Identities = 98/222 (44%), Positives = 131/222 (59%), Gaps = 15/222 (6%)
 Frame = -3

Query: 1071 GSDYKLCPRGRKVANIRPQIPGMPNVPNSLAVIATVSAPPRDYRP--------LYQSIKY 916
            G+DY +  + R +  +  ++PGM NV NSLAVI  +S    +           + ++ + 
Sbjct: 386  GTDYTVVYKNRPMTRVSLRLPGMYNVLNSLAVIVVMSLLAAEKESDVGAQAKLMKRTAEA 445

Query: 915  VRFPLNNFQGVSRRFEMIGRIHECHIYDDYASPPTEVRAVLQAARQRFPCKDIVVVFQPH 736
                L  F GV RRF+ +G +H CHI DDYA  PTEVRAVLQAARQR+  + I V+FQPH
Sbjct: 446  AGRALGAFSGVRRRFDFVGSVHGCHIIDDYAHHPTEVRAVLQAARQRYDQQPIWVIFQPH 505

Query: 735  TYSRVAALGREFATAFSDADEVIVTEIYAARETNVWN-VSGRDLANSIINHRSEYVPTLV 559
            T SR+AA   +FA AFS AD VIVT++YAAR       V+G DLAN+II   + Y+P L 
Sbjct: 506  TVSRLAAFLPDFAPAFSAADRVIVTQVYAARNIPTEKVVTGEDLANAIIGPPAVYIPDLD 565

Query: 558  F**CTFKYLVSLSPDRE------LVVLTLGAGDITTVGRVLL 451
                   + ++     E      +V+LTLGAGDIT VGR L+
Sbjct: 566  VVVERLSWELAALDKNEMNDRGNIVLLTLGAGDITDVGRRLM 607


>ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Selaginella moellendorffii]
            gi|300165094|gb|EFJ31702.1| hypothetical protein
            SELMODRAFT_408505 [Selaginella moellendorffii]
          Length = 521

 Score =  158 bits (400), Expect = 2e-36
 Identities = 98/226 (43%), Positives = 132/226 (58%), Gaps = 16/226 (7%)
 Frame = -3

Query: 1071 GSDYKLCPRGRKVANIRPQIPGMPNVPNSLAVIATVSA----------PPRDYRPLYQSI 922
            G+DY    R R +A +  ++PG  NV NSLAV+A VS                + +  + 
Sbjct: 294  GTDYVAVYRNRPMARVSLKLPGTYNVLNSLAVLAAVSLLAFKGKGSCDESGQLKAMAVAA 353

Query: 921  KYVRFPLNNFQGVSRRFEMIGRIHECHIYDDYASPPTEVRAVLQAARQRFPCKDIVVVFQ 742
            +     L +FQG+ RRFE +G +  C IYDDYA  PTEVRAVLQAARQRF  + I VVFQ
Sbjct: 354  QAASSALQSFQGLRRRFEYVGTVRRCDIYDDYAHHPTEVRAVLQAARQRFDKQPIWVVFQ 413

Query: 741  PHTYSRVAALGREFATAFSDADEVIVTEIYAARETNVWNVSGRDLANSIINHRSEYVPTL 562
            PHTYSR+A L ++FA AFS A+      I++ARE NVW +SG DL + I    + ++PTL
Sbjct: 414  PHTYSRIANLLQDFAPAFSGAN-----RIFSARENNVWELSGADLVSVITGPPAMFIPTL 468

Query: 561  VF**CTFKYLVSLSPDRE------LVVLTLGAGDITTVGRVLLHQL 442
                    + ++   + E      +V+LTLGAGD+T+VG  LL  L
Sbjct: 469  DEVIERLSWELTALEENEVNKGGNIVLLTLGAGDVTSVGPKLLDAL 514


>ref|XP_001776739.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162671888|gb|EDQ58433.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 680

 Score =  158 bits (400), Expect = 2e-36
 Identities = 98/222 (44%), Positives = 131/222 (59%), Gaps = 15/222 (6%)
 Frame = -3

Query: 1071 GSDYKLCPRGRKVANIRPQIPGMPNVPNSLAVIATVSAPPRDYRP--------LYQSIKY 916
            G+DY +  + R +  +  ++PGM NV NSLAVI  +S    +           + ++ + 
Sbjct: 451  GTDYTVVYKNRPMTRVSLRLPGMYNVLNSLAVIVVMSLLAAEKESDVGAQAKLMKRTAEA 510

Query: 915  VRFPLNNFQGVSRRFEMIGRIHECHIYDDYASPPTEVRAVLQAARQRFPCKDIVVVFQPH 736
                L  F GV RRF+ +G +H CHI DDYA  PTEVRAVLQAARQR+  + I V+FQPH
Sbjct: 511  AGRALGAFSGVRRRFDFVGSVHGCHIIDDYAHHPTEVRAVLQAARQRYDQQPIWVIFQPH 570

Query: 735  TYSRVAALGREFATAFSDADEVIVTEIYAARETNVWN-VSGRDLANSIINHRSEYVPTLV 559
            T SR+AA   +FA AFS AD VIVT++YAAR       V+G DLAN+II   + Y+P L 
Sbjct: 571  TVSRLAAFLPDFAPAFSAADRVIVTQVYAARNIPTEKVVTGEDLANAIIGPPAVYIPDLD 630

Query: 558  F**CTFKYLVSLSPDRE------LVVLTLGAGDITTVGRVLL 451
                   + ++     E      +V+LTLGAGDIT VGR L+
Sbjct: 631  VVVERLSWELAALDKNEMNDRGNIVLLTLGAGDITDVGRRLM 672


Top