BLASTX nr result

ID: Panax21_contig00022016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022016
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   214   3e-53
ref|XP_002277017.1| PREDICTED: transcription initiation factor T...   204   3e-50
ref|XP_002532706.1| Transcription initiation factor TFIID subuni...   202   8e-50
ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|2...   200   5e-49
gb|ACN30761.1| unknown [Zea mays]                                     199   6e-49

>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  214 bits (544), Expect = 3e-53
 Identities = 105/121 (86%), Positives = 117/121 (96%)
 Frame = +1

Query: 580 LGKFSSTGDPDKMAKMQSILSQFSEEQMSRYESFRRSGFQKANMKRLLASIIGSPKISVP 759
           L KF S+GDPDKMAKMQ+ILSQF+EEQMSRYESFRR+GFQKANMKRLLASI G+ KISVP
Sbjct: 100 LAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVP 159

Query: 760 MTIVVSGIAKIYVGELVETARVVMTERNETGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 939
           MTIVVSGIAK++VGELVETARVVMTERN+TGPIRPCH+REAYRRLKLEGK+P++SVPRLF
Sbjct: 160 MTIVVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLF 219

Query: 940 R 942
           R
Sbjct: 220 R 220


>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score =  204 bits (518), Expect = 3e-50
 Identities = 102/121 (84%), Positives = 111/121 (91%)
 Frame = +1

Query: 580 LGKFSSTGDPDKMAKMQSILSQFSEEQMSRYESFRRSGFQKANMKRLLASIIGSPKISVP 759
           LGK  ++GDP KMAKMQ+ILSQF+EEQMSRYESFRRSGFQKANMK+LL SI GS KIS P
Sbjct: 78  LGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQKANMKKLLVSITGSQKISAP 137

Query: 760 MTIVVSGIAKIYVGELVETARVVMTERNETGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 939
           MTIV SGIAK++VGELVETAR+VMTER ETGPIRPCHIREAYRRLKLEGKVP+RSV RLF
Sbjct: 138 MTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRSVSRLF 197

Query: 940 R 942
           R
Sbjct: 198 R 198


>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223527552|gb|EEF29673.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 205

 Score =  202 bits (515), Expect = 8e-50
 Identities = 101/121 (83%), Positives = 110/121 (90%)
 Frame = +1

Query: 580 LGKFSSTGDPDKMAKMQSILSQFSEEQMSRYESFRRSGFQKANMKRLLASIIGSPKISVP 759
           L KF ST DPDKMAKMQ+ILSQF+E QM+RYESFRRS  QKANM+RLL SI GS KIS+P
Sbjct: 85  LAKFPSTADPDKMAKMQAILSQFTENQMTRYESFRRSALQKANMRRLLVSITGSQKISLP 144

Query: 760 MTIVVSGIAKIYVGELVETARVVMTERNETGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 939
           MTIVV GIAK++VGELVETAR+VMTER E+GPIRPCHIREAYRRLKLEGKVPKRSVPRLF
Sbjct: 145 MTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 204

Query: 940 R 942
           R
Sbjct: 205 R 205


>ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|222846634|gb|EEE84181.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  200 bits (508), Expect = 5e-49
 Identities = 100/121 (82%), Positives = 109/121 (90%)
 Frame = +1

Query: 580 LGKFSSTGDPDKMAKMQSILSQFSEEQMSRYESFRRSGFQKANMKRLLASIIGSPKISVP 759
           L K +ST DPDKMAKMQ+IL+QF+E QMSRYESFRRS  QK NMKRLL SI GS KIS+P
Sbjct: 102 LSKLASTADPDKMAKMQTILAQFTEGQMSRYESFRRSALQKTNMKRLLVSITGSQKISLP 161

Query: 760 MTIVVSGIAKIYVGELVETARVVMTERNETGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 939
           MTIVV GIAK++VGELVETAR+VMTER E+GPIRPCHIREAYRRLKLEGKVPKRSVPRLF
Sbjct: 162 MTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 221

Query: 940 R 942
           R
Sbjct: 222 R 222


>gb|ACN30761.1| unknown [Zea mays]
          Length = 203

 Score =  199 bits (507), Expect = 6e-49
 Identities = 96/117 (82%), Positives = 112/117 (95%)
 Frame = +1

Query: 592 SSTGDPDKMAKMQSILSQFSEEQMSRYESFRRSGFQKANMKRLLASIIGSPKISVPMTIV 771
           SSTGDPDK+AKM +ILSQF+++QM+RYESFRRSGFQK+NMKRLLASI GS KIS+P +IV
Sbjct: 87  SSTGDPDKLAKMNAILSQFTQQQMNRYESFRRSGFQKSNMKRLLASITGSQKISIPTSIV 146

Query: 772 VSGIAKIYVGELVETARVVMTERNETGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 942
           VSGIAKI+VGEL+ETARVVM+ER ++GPIRPCHIREAYRRLKLEGK+P+RSVPRLFR
Sbjct: 147 VSGIAKIFVGELIETARVVMSERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 203


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