BLASTX nr result

ID: Panax21_contig00022004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022004
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38108.3| unnamed protein product [Vitis vinifera]              249   4e-64
ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   249   4e-64
ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [C...   233   5e-59
gb|AFK43033.1| unknown [Lotus japonicus]                              230   3e-58
ref|XP_004172876.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   229   6e-58

>emb|CBI38108.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  249 bits (637), Expect = 4e-64
 Identities = 132/191 (69%), Positives = 148/191 (77%)
 Frame = -1

Query: 737 RARGERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKS 558
           ++R  +PTSLSWSSSFP +N+  NS + PS  + N+  +VQAAWTRRSR EAAK+P+RKS
Sbjct: 31  QSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSLNKCLVVQAAWTRRSRSEAAKRPSRKS 90

Query: 557 WKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACR 378
           WKQKTDMYMRPFLLNVFFSKRF+HAKVMHR TSKVISVATTNSKDLRNTL SLTD NACR
Sbjct: 91  WKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSLTDHNACR 150

Query: 377 VXXXXXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVI 198
           V                         GKLIAERS EADVFAMSYE +K+ERIEG+LGIV+
Sbjct: 151 V------------------------IGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVL 186

Query: 197 DTIKENGIIFV 165
           DTIKENGIIFV
Sbjct: 187 DTIKENGIIFV 197


>ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
          Length = 183

 Score =  249 bits (637), Expect = 4e-64
 Identities = 132/191 (69%), Positives = 148/191 (77%)
 Frame = -1

Query: 737 RARGERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKS 558
           ++R  +PTSLSWSSSFP +N+  NS + PS  + N+  +VQAAWTRRSR EAAK+P+RKS
Sbjct: 17  QSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSLNKCLVVQAAWTRRSRSEAAKRPSRKS 76

Query: 557 WKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACR 378
           WKQKTDMYMRPFLLNVFFSKRF+HAKVMHR TSKVISVATTNSKDLRNTL SLTD NACR
Sbjct: 77  WKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSLTDHNACR 136

Query: 377 VXXXXXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVI 198
           V                         GKLIAERS EADVFAMSYE +K+ERIEG+LGIV+
Sbjct: 137 V------------------------IGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVL 172

Query: 197 DTIKENGIIFV 165
           DTIKENGIIFV
Sbjct: 173 DTIKENGIIFV 183


>ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
          Length = 190

 Score =  233 bits (593), Expect = 5e-59
 Identities = 120/187 (64%), Positives = 144/187 (77%)
 Frame = -1

Query: 725 ERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKSWKQK 546
           ++ +SLSW+SSFP +++   S    SN +  +   +Q+AWTRRSR EAAK+PN+KSWKQ+
Sbjct: 27  QKSSSLSWASSFPHVSIFRGSPFASSNSSYAKVLFIQSAWTRRSREEAAKRPNKKSWKQR 86

Query: 545 TDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACRVXXX 366
           TDMYMRPFLLNVFFSK+F+HAKVMHRGTSKVISVATTN+KDLRN+LPSLTD NACRV   
Sbjct: 87  TDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRV--- 143

Query: 365 XXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVIDTIK 186
                                 GKLIAERSKEADV+A+SYE +K+ERIEG+LGIVIDTIK
Sbjct: 144 ---------------------IGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIK 182

Query: 185 ENGIIFV 165
           ENGI+FV
Sbjct: 183 ENGIMFV 189


>gb|AFK43033.1| unknown [Lotus japonicus]
          Length = 202

 Score =  230 bits (587), Expect = 3e-58
 Identities = 125/193 (64%), Positives = 145/193 (75%), Gaps = 7/193 (3%)
 Frame = -1

Query: 722 RPTSLSWSSSFPQL-NLSINSTSYPSNL----TPN--QGFLVQAAWTRRSRGEAAKKPNR 564
           +  S SW SSFP L N+S + +  PS L     P+   G  V+AAWTRRSRGEAAK+PNR
Sbjct: 34  KSVSFSWLSSFPTLTNISFSPSPSPSPLLLRTNPSLFNGSFVRAAWTRRSRGEAAKRPNR 93

Query: 563 KSWKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNA 384
           KSWKQ+TDMYMRPFLLNVFFSKRF+HAKVMHRGTSKVISVATTNSKDLRN+LPSLTD +A
Sbjct: 94  KSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLRNSLPSLTDHDA 153

Query: 383 CRVXXXXXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGI 204
           CRV                         G+LIA+RSKEADV+A++YE +K+ERIEG+LGI
Sbjct: 154 CRV------------------------VGRLIAQRSKEADVYALAYEPRKDERIEGKLGI 189

Query: 203 VIDTIKENGIIFV 165
           V+DTIKENGIIFV
Sbjct: 190 VLDTIKENGIIFV 202


>ref|XP_004172876.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like
           [Cucumis sativus]
          Length = 190

 Score =  229 bits (584), Expect = 6e-58
 Identities = 118/187 (63%), Positives = 143/187 (76%)
 Frame = -1

Query: 725 ERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKSWKQK 546
           ++ +SLSW+ SFP +++   S    SN +  +  L+Q+AWTRRSR EAAK+PN+KSWKQ+
Sbjct: 27  QKSSSLSWAPSFPHVSIFRGSPFASSNSSYAKVLLIQSAWTRRSREEAAKRPNKKSWKQR 86

Query: 545 TDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACRVXXX 366
           TDMYMRPF LNVFFSK+F+HAKVMHRGTSKVISVATTN+KDLRN+LPSLTD NACRV   
Sbjct: 87  TDMYMRPFXLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRV--- 143

Query: 365 XXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVIDTIK 186
                                 GKLIAERSK+ADV+A+SYE +K+ERIEG+LGIVIDTIK
Sbjct: 144 ---------------------IGKLIAERSKDADVYAISYEPRKDERIEGKLGIVIDTIK 182

Query: 185 ENGIIFV 165
           ENGI+FV
Sbjct: 183 ENGIMFV 189


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