BLASTX nr result
ID: Panax21_contig00022004
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022004 (827 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38108.3| unnamed protein product [Vitis vinifera] 249 4e-64 ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis ... 249 4e-64 ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [C... 233 5e-59 gb|AFK43033.1| unknown [Lotus japonicus] 230 3e-58 ref|XP_004172876.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 229 6e-58 >emb|CBI38108.3| unnamed protein product [Vitis vinifera] Length = 197 Score = 249 bits (637), Expect = 4e-64 Identities = 132/191 (69%), Positives = 148/191 (77%) Frame = -1 Query: 737 RARGERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKS 558 ++R +PTSLSWSSSFP +N+ NS + PS + N+ +VQAAWTRRSR EAAK+P+RKS Sbjct: 31 QSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSLNKCLVVQAAWTRRSRSEAAKRPSRKS 90 Query: 557 WKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACR 378 WKQKTDMYMRPFLLNVFFSKRF+HAKVMHR TSKVISVATTNSKDLRNTL SLTD NACR Sbjct: 91 WKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSLTDHNACR 150 Query: 377 VXXXXXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVI 198 V GKLIAERS EADVFAMSYE +K+ERIEG+LGIV+ Sbjct: 151 V------------------------IGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVL 186 Query: 197 DTIKENGIIFV 165 DTIKENGIIFV Sbjct: 187 DTIKENGIIFV 197 >ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera] Length = 183 Score = 249 bits (637), Expect = 4e-64 Identities = 132/191 (69%), Positives = 148/191 (77%) Frame = -1 Query: 737 RARGERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKS 558 ++R +PTSLSWSSSFP +N+ NS + PS + N+ +VQAAWTRRSR EAAK+P+RKS Sbjct: 17 QSRSLKPTSLSWSSSFPNINIFTNSITNPSLPSLNKCLVVQAAWTRRSRSEAAKRPSRKS 76 Query: 557 WKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACR 378 WKQKTDMYMRPFLLNVFFSKRF+HAKVMHR TSKVISVATTNSKDLRNTL SLTD NACR Sbjct: 77 WKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSLTDHNACR 136 Query: 377 VXXXXXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVI 198 V GKLIAERS EADVFAMSYE +K+ERIEG+LGIV+ Sbjct: 137 V------------------------IGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVL 172 Query: 197 DTIKENGIIFV 165 DTIKENGIIFV Sbjct: 173 DTIKENGIIFV 183 >ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus] Length = 190 Score = 233 bits (593), Expect = 5e-59 Identities = 120/187 (64%), Positives = 144/187 (77%) Frame = -1 Query: 725 ERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKSWKQK 546 ++ +SLSW+SSFP +++ S SN + + +Q+AWTRRSR EAAK+PN+KSWKQ+ Sbjct: 27 QKSSSLSWASSFPHVSIFRGSPFASSNSSYAKVLFIQSAWTRRSREEAAKRPNKKSWKQR 86 Query: 545 TDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACRVXXX 366 TDMYMRPFLLNVFFSK+F+HAKVMHRGTSKVISVATTN+KDLRN+LPSLTD NACRV Sbjct: 87 TDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRV--- 143 Query: 365 XXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVIDTIK 186 GKLIAERSKEADV+A+SYE +K+ERIEG+LGIVIDTIK Sbjct: 144 ---------------------IGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIK 182 Query: 185 ENGIIFV 165 ENGI+FV Sbjct: 183 ENGIMFV 189 >gb|AFK43033.1| unknown [Lotus japonicus] Length = 202 Score = 230 bits (587), Expect = 3e-58 Identities = 125/193 (64%), Positives = 145/193 (75%), Gaps = 7/193 (3%) Frame = -1 Query: 722 RPTSLSWSSSFPQL-NLSINSTSYPSNL----TPN--QGFLVQAAWTRRSRGEAAKKPNR 564 + S SW SSFP L N+S + + PS L P+ G V+AAWTRRSRGEAAK+PNR Sbjct: 34 KSVSFSWLSSFPTLTNISFSPSPSPSPLLLRTNPSLFNGSFVRAAWTRRSRGEAAKRPNR 93 Query: 563 KSWKQKTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNA 384 KSWKQ+TDMYMRPFLLNVFFSKRF+HAKVMHRGTSKVISVATTNSKDLRN+LPSLTD +A Sbjct: 94 KSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLRNSLPSLTDHDA 153 Query: 383 CRVXXXXXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGI 204 CRV G+LIA+RSKEADV+A++YE +K+ERIEG+LGI Sbjct: 154 CRV------------------------VGRLIAQRSKEADVYALAYEPRKDERIEGKLGI 189 Query: 203 VIDTIKENGIIFV 165 V+DTIKENGIIFV Sbjct: 190 VLDTIKENGIIFV 202 >ref|XP_004172876.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like [Cucumis sativus] Length = 190 Score = 229 bits (584), Expect = 6e-58 Identities = 118/187 (63%), Positives = 143/187 (76%) Frame = -1 Query: 725 ERPTSLSWSSSFPQLNLSINSTSYPSNLTPNQGFLVQAAWTRRSRGEAAKKPNRKSWKQK 546 ++ +SLSW+ SFP +++ S SN + + L+Q+AWTRRSR EAAK+PN+KSWKQ+ Sbjct: 27 QKSSSLSWAPSFPHVSIFRGSPFASSNSSYAKVLLIQSAWTRRSREEAAKRPNKKSWKQR 86 Query: 545 TDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNSKDLRNTLPSLTDTNACRVXXX 366 TDMYMRPF LNVFFSK+F+HAKVMHRGTSKVISVATTN+KDLRN+LPSLTD NACRV Sbjct: 87 TDMYMRPFXLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRV--- 143 Query: 365 XXXXXXXXXXXXXXXXXXXXXXGKLIAERSKEADVFAMSYEAKKNERIEGRLGIVIDTIK 186 GKLIAERSK+ADV+A+SYE +K+ERIEG+LGIVIDTIK Sbjct: 144 ---------------------IGKLIAERSKDADVYAISYEPRKDERIEGKLGIVIDTIK 182 Query: 185 ENGIIFV 165 ENGI+FV Sbjct: 183 ENGIMFV 189