BLASTX nr result

ID: Panax21_contig00022002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022002
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519838.1| synaptonemal complex protein, putative [Rici...   237   1e-60
emb|CBI33906.3| unnamed protein product [Vitis vinifera]              233   1e-59
ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-59
ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis...   233   1e-59
ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56

>ref|XP_002519838.1| synaptonemal complex protein, putative [Ricinus communis]
            gi|223540884|gb|EEF42442.1| synaptonemal complex protein,
            putative [Ricinus communis]
          Length = 781

 Score =  237 bits (604), Expect = 1e-60
 Identities = 121/180 (67%), Positives = 135/180 (75%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3    EAKWRQAQKAKELASAQVEEERRLKETTEASNKRGHEALRLKIEIDFQRHKDDLQRLEQE 182
            EAKWRQ  K KE   AQVEEERR KE  EASNKR  EALRLKIEIDFQRHKDDLQRLEQE
Sbjct: 609  EAKWRQEVKVKEQVLAQVEEERRSKEAAEASNKRKLEALRLKIEIDFQRHKDDLQRLEQE 668

Query: 183  LSRLKVSAQSNELNHQSNXXXXXXXXXXXXXXXXXXXTVGNTEGTKPQGETIASMLHELD 362
            LSRLK SA+S +LNHQ +                     G  E TKPQGETIA +LHELD
Sbjct: 669  LSRLKASAESPDLNHQLSTLPS-----------------GKPEKTKPQGETIARLLHELD 711

Query: 363  NQESSSEKG-GCDRECLICMKDEVSVVFLPCAHQVLCSNCNDSYGKKGKAICPCCRVPIE 539
              E SS+KG  C+R+C+ICMKDEVS+VFLPCAHQV+C++C+D+YGKKGKA CPCCRVPIE
Sbjct: 712  KLEDSSDKGANCERDCIICMKDEVSIVFLPCAHQVMCASCSDNYGKKGKATCPCCRVPIE 771


>emb|CBI33906.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  233 bits (594), Expect = 1e-59
 Identities = 123/180 (68%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   EAKWRQAQKAKELASAQVEEERRLKETTEASNKRGHEALRLKIEIDFQRHKDDLQRLEQE 182
           E KWRQ  KAKELA  QVEEERR KE  EA+NKR  EALRLKIEIDFQRHKDDLQRLEQE
Sbjct: 144 EVKWRQDLKAKELAFVQVEEERRAKEAAEANNKRKLEALRLKIEIDFQRHKDDLQRLEQE 203

Query: 183 LSRLKVSAQSNELNHQSNXXXXXXXXXXXXXXXXXXXTVGNTEGTKPQGETIASMLHELD 362
           LSRLKVSAQS EL H  N                      + EG KPQGETIA +LHELD
Sbjct: 204 LSRLKVSAQSTELVHPLNTLPNR-----------------DCEGAKPQGETIARLLHELD 246

Query: 363 NQESSSEKG-GCDRECLICMKDEVSVVFLPCAHQVLCSNCNDSYGKKGKAICPCCRVPIE 539
             E SSEKG   DREC+IC+KDEVSVVFLPCAH+VLC+NCN+ YGKKGKA CP CR PIE
Sbjct: 247 KLEDSSEKGVNSDRECIICLKDEVSVVFLPCAHEVLCANCNEDYGKKGKATCPSCRAPIE 306


>ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|222870230|gb|EEF07361.1|
            predicted protein [Populus trichocarpa]
          Length = 729

 Score =  233 bits (594), Expect = 1e-59
 Identities = 120/180 (66%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3    EAKWRQAQKAKELASAQVEEERRLKETTEASNKRGHEALRLKIEIDFQRHKDDLQRLEQE 182
            E KWRQ  KAKE A   VEEER  KE  EA NKR  EALRLKIEIDFQRHKDDLQRLEQE
Sbjct: 557  EVKWRQEMKAKEQALTLVEEERCAKEAAEAENKRKLEALRLKIEIDFQRHKDDLQRLEQE 616

Query: 183  LSRLKVSAQSNELNHQSNXXXXXXXXXXXXXXXXXXXTVGNTEGTKPQGETIASMLHELD 362
             SRLK +A+S ELN+QSN                     G +E  KPQGETIA +LHELD
Sbjct: 617  FSRLKSAAESTELNNQSNALPS-----------------GKSERAKPQGETIARLLHELD 659

Query: 363  NQESSSEKG-GCDRECLICMKDEVSVVFLPCAHQVLCSNCNDSYGKKGKAICPCCRVPIE 539
              E+SSEKG  CDREC+IC+KDEVSVVFLPCAHQV+C++C+D+YGKKGKA CPCCRVPIE
Sbjct: 660  KLENSSEKGANCDRECMICLKDEVSVVFLPCAHQVICASCSDNYGKKGKATCPCCRVPIE 719


>ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis vinifera]
          Length = 723

 Score =  233 bits (594), Expect = 1e-59
 Identities = 123/180 (68%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3    EAKWRQAQKAKELASAQVEEERRLKETTEASNKRGHEALRLKIEIDFQRHKDDLQRLEQE 182
            E KWRQ  KAKELA  QVEEERR KE  EA+NKR  EALRLKIEIDFQRHKDDLQRLEQE
Sbjct: 551  EVKWRQDLKAKELAFVQVEEERRAKEAAEANNKRKLEALRLKIEIDFQRHKDDLQRLEQE 610

Query: 183  LSRLKVSAQSNELNHQSNXXXXXXXXXXXXXXXXXXXTVGNTEGTKPQGETIASMLHELD 362
            LSRLKVSAQS EL H  N                      + EG KPQGETIA +LHELD
Sbjct: 611  LSRLKVSAQSTELVHPLNTLPNR-----------------DCEGAKPQGETIARLLHELD 653

Query: 363  NQESSSEKG-GCDRECLICMKDEVSVVFLPCAHQVLCSNCNDSYGKKGKAICPCCRVPIE 539
              E SSEKG   DREC+IC+KDEVSVVFLPCAH+VLC+NCN+ YGKKGKA CP CR PIE
Sbjct: 654  KLEDSSEKGVNSDRECIICLKDEVSVVFLPCAHEVLCANCNEDYGKKGKATCPSCRAPIE 713


>ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|222834036|gb|EEE72513.1|
            predicted protein [Populus trichocarpa]
          Length = 718

 Score =  223 bits (568), Expect = 1e-56
 Identities = 114/180 (63%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3    EAKWRQAQKAKELASAQVEEERRLKETTEASNKRGHEALRLKIEIDFQRHKDDLQRLEQE 182
            E KWR   KAKE A A VEEER  KE TEA NKR  +ALR KIEIDFQRHKDDLQRLEQE
Sbjct: 546  EVKWRHEVKAKEQALALVEEERCSKEATEAENKRKLDALRRKIEIDFQRHKDDLQRLEQE 605

Query: 183  LSRLKVSAQSNELNHQSNXXXXXXXXXXXXXXXXXXXTVGNTEGTKPQGETIASMLHELD 362
             SRLK +A+S ELN+QSN                     G +E TKPQG TIA +LHE++
Sbjct: 606  FSRLKSAAESTELNYQSNALPS-----------------GKSERTKPQGGTIARLLHEIE 648

Query: 363  NQESSSEKG-GCDRECLICMKDEVSVVFLPCAHQVLCSNCNDSYGKKGKAICPCCRVPIE 539
              E+SSEKG  CDR+C+ICMKDEVS+V LPCAHQV+C+NC+ +YGKKGKA CPCCRVP+E
Sbjct: 649  KLENSSEKGANCDRKCMICMKDEVSIVLLPCAHQVICANCSGNYGKKGKATCPCCRVPVE 708


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