BLASTX nr result

ID: Panax21_contig00021970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021970
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273442.1| PREDICTED: putative DNA-binding protein ESCA...   210   5e-52
ref|XP_002510734.1| DNA binding protein, putative [Ricinus commu...   196   8e-48
ref|XP_002280017.1| PREDICTED: putative DNA-binding protein ESCA...   190   7e-46
gb|AFW63603.1| hypothetical protein ZEAMMB73_729481 [Zea mays]        181   3e-43
ref|XP_003570225.1| PREDICTED: putative DNA-binding protein ESCA...   179   2e-42

>ref|XP_002273442.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 292

 Score =  210 bits (535), Expect = 5e-52
 Identities = 123/213 (57%), Positives = 131/213 (61%), Gaps = 15/213 (7%)
 Frame = +3

Query: 618  GGNSRYVHQLLQPG------------GGEQQSDHSNDSAPDDDNK---AEIDANTSSGGG 752
            G  SRYVHQLL P                QQ   S D +PDD  +    E  A  SSGG 
Sbjct: 7    GSGSRYVHQLLGPELHLQRPSSLPQHQATQQPSDSRDESPDDQEQRADTEEAAAASSGGA 66

Query: 753  PATSNXXXXXXXXXXKNKPKPPIIVTRDSPNALRSHVLEIAAGADVMESVSNYARRRGRG 932
              +SN          KNKPKPPIIVTRDSPNALRSHVLE+AAGADVMESV NYARRRGRG
Sbjct: 67   TTSSNRRPRGRPPGSKNKPKPPIIVTRDSPNALRSHVLEVAAGADVMESVLNYARRRGRG 126

Query: 933  VCVLSGSGTVSNVRLRQPAAPTGSVVTLQGGFEILSLSGTVXXXXXXXXXXXXXIFLXXX 1112
            VCVLSG GTV NV LRQPA+P GS+VTL G FEILSLSGTV             IFL   
Sbjct: 127  VCVLSGGGTVMNVTLRQPASPAGSIVTLHGRFEILSLSGTVLPPPAPPSAGGLSIFLSGG 186

Query: 1113 XXXXXXXXXXXPLIATGPVVLMAASFANAVLER 1211
                       PL+A+GPVVLMAASFANAV ER
Sbjct: 187  QGQVVGGSVVGPLMASGPVVLMAASFANAVFER 219


>ref|XP_002510734.1| DNA binding protein, putative [Ricinus communis]
            gi|223551435|gb|EEF52921.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 289

 Score =  196 bits (499), Expect = 8e-48
 Identities = 127/224 (56%), Positives = 142/224 (63%), Gaps = 17/224 (7%)
 Frame = +3

Query: 591  MAAY---QSAGGGGNSRYVHQLLQPGGGEQQ----SDHSNDSAPD-------DDNK---A 719
            MA Y   QSA G G SRYVHQLL+P    Q+    S  S+DS  +       D NK   +
Sbjct: 1    MAGYNNEQSATGTG-SRYVHQLLRPELHLQRPSFPSQPSSDSKDNNISPQSKDHNKFSDS 59

Query: 720  EIDANTSSGGGPATSNXXXXXXXXXXKNKPKPPIIVTRDSPNALRSHVLEIAAGADVMES 899
            E  A TSSG     SN          KNKPKPPIIVTRDSPNALRSHVLE++ G+D+MES
Sbjct: 60   EAAAATSSG-----SNRRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEVSTGSDIMES 114

Query: 900  VSNYARRRGRGVCVLSGSGTVSNVRLRQPAAPTGSVVTLQGGFEILSLSGTVXXXXXXXX 1079
            VS YAR+RGRGVCVLSG+GTV+NV LRQPA+P GSVVTL G FEILSLSGTV        
Sbjct: 115  VSIYARKRGRGVCVLSGNGTVANVTLRQPASPAGSVVTLHGRFEILSLSGTVLPPPAPPG 174

Query: 1080 XXXXXIFLXXXXXXXXXXXXXXPLIATGPVVLMAASFANAVLER 1211
                 IFL              PL+A+GPVVLMAASFANAV ER
Sbjct: 175  AGGLSIFLSGGQGQVVGGSVVGPLMASGPVVLMAASFANAVFER 218


>ref|XP_002280017.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 289

 Score =  190 bits (482), Expect = 7e-46
 Identities = 107/205 (52%), Positives = 127/205 (61%), Gaps = 7/205 (3%)
 Frame = +3

Query: 618  GGNSRYVHQLLQPG-------GGEQQSDHSNDSAPDDDNKAEIDANTSSGGGPATSNXXX 776
            G  SRY+HQL +P            Q    NDS    +N+   D + S G    TS+   
Sbjct: 7    GAGSRYIHQLFRPELQLERTPQQPHQPPQLNDSGDSPENEDRTDPDGSPGAA-TTSSRRP 65

Query: 777  XXXXXXXKNKPKPPIIVTRDSPNALRSHVLEIAAGADVMESVSNYARRRGRGVCVLSGSG 956
                   KNK KPPII+TRDSPNALRSHVLEI+AGAD++ESVSNYARRRGRGVC+LSG G
Sbjct: 66   RGRPPGSKNKAKPPIIITRDSPNALRSHVLEISAGADIVESVSNYARRRGRGVCILSGGG 125

Query: 957  TVSNVRLRQPAAPTGSVVTLQGGFEILSLSGTVXXXXXXXXXXXXXIFLXXXXXXXXXXX 1136
             V++V LRQPAAP+GSVVTL G FEILSL+GT              I+L           
Sbjct: 126  AVTDVTLRQPAAPSGSVVTLHGRFEILSLTGTALPPPAPPGAGGLTIYLGGGQGQVVGGR 185

Query: 1137 XXXPLIATGPVVLMAASFANAVLER 1211
               PL+A+GPV+LMAASFANAV +R
Sbjct: 186  VVGPLVASGPVLLMAASFANAVYDR 210


>gb|AFW63603.1| hypothetical protein ZEAMMB73_729481 [Zea mays]
          Length = 434

 Score =  181 bits (460), Expect = 3e-43
 Identities = 117/248 (47%), Positives = 133/248 (53%), Gaps = 28/248 (11%)
 Frame = +3

Query: 552  ANKWWERNRIDVEMAAYQSAGGGGNSRYVHQLLQPG---------GGEQQSDHSNDSAPD 704
            A KWWER   D  M      GGGG+SRY HQLL+P              + +H   S   
Sbjct: 106  AGKWWERPD-DTGMPG-MDPGGGGSSRYFHQLLRPQQQQPSPLSPNSHVKMEHHRMSPDK 163

Query: 705  DDNKAEIDANTSSGGGP-----------------ATSNXXXXXXXXXXKNKPKPPIIVTR 833
                 E DA  S  GG                   T            KNKPKPPIIVTR
Sbjct: 164  SPVVGEADAGGSGAGGDQPSSSAMVPVEGGGSGTGTPTRRPRGRPAGSKNKPKPPIIVTR 223

Query: 834  DSPNALRSHVLEIAAGADVMESVSNYARRRGRGVCVLSGSGTVSNVRLRQP-AAPTGSVV 1010
            DSPNAL SHVLE+AAGADV++ V+ +ARRRGRGVCVLSG G V+NV LRQP A+P GS+V
Sbjct: 224  DSPNALHSHVLEVAAGADVVDCVAEFARRRGRGVCVLSGGGAVANVALRQPGASPPGSMV 283

Query: 1011 -TLQGGFEILSLSGTVXXXXXXXXXXXXXIFLXXXXXXXXXXXXXXPLIATGPVVLMAAS 1187
             TL+G  EILSL+GTV             +FL              PL+A GPVVLMAAS
Sbjct: 284  ATLRGRLEILSLTGTVLPPPAPPGASGLTVFLSGGQGQVVGGSVVGPLVAAGPVVLMAAS 343

Query: 1188 FANAVLER 1211
            FANAV ER
Sbjct: 344  FANAVYER 351


>ref|XP_003570225.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Brachypodium
            distachyon]
          Length = 337

 Score =  179 bits (453), Expect = 2e-42
 Identities = 113/233 (48%), Positives = 133/233 (57%), Gaps = 31/233 (13%)
 Frame = +3

Query: 606  SAGGGGNSRYVHQLLQPGGGEQQS-----------DHSNDSAPDDDNK-----AEIDANT 737
            S GG  +SRY H LL+P   +QQ            +HS  ++PD++N      A  DA  
Sbjct: 12   SPGGASSSRYFHHLLRPQQQQQQPSPLSPTSHVKMEHSKLTSPDNNNSPAGGDAAADAGG 71

Query: 738  SSGGGPATS-------------NXXXXXXXXXXKNKPKPPIIVTRDSPNALRSHVLEIAA 878
             SG  P++S                        KNKPKPPIIVTRDSPNAL SHVLE+AA
Sbjct: 72   GSGDQPSSSAMAPDGSGGSGGPTRRPRGRPAGSKNKPKPPIIVTRDSPNALHSHVLEVAA 131

Query: 879  GADVMESVSNYARRRGRGVCVLSGSGTVSNVRLRQP-AAPTGSVV-TLQGGFEILSLSGT 1052
            GAD+++ V+ YARRRGRGVCVLSG G V NV LRQP A+P GSVV TL+G FEILSL+GT
Sbjct: 132  GADIVDCVAEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSVVATLRGRFEILSLTGT 191

Query: 1053 VXXXXXXXXXXXXXIFLXXXXXXXXXXXXXXPLIATGPVVLMAASFANAVLER 1211
            V             +FL               L+A GPVVLMAASFANAV ER
Sbjct: 192  VLPPPAPPGASGLTVFLSGGQGQVIGGSVVGSLVAAGPVVLMAASFANAVYER 244


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