BLASTX nr result
ID: Panax21_contig00021959
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00021959 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containin... 110 1e-22 ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containin... 90 2e-16 emb|CAD36023.1| transcription factor R18 [Craterostigma plantagi... 89 3e-16 ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|2... 75 4e-12 ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containin... 71 8e-11 >ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis vinifera] gi|297742965|emb|CBI35832.3| unnamed protein product [Vitis vinifera] Length = 438 Score = 110 bits (275), Expect = 1e-22 Identities = 62/132 (46%), Positives = 81/132 (61%), Gaps = 1/132 (0%) Frame = -2 Query: 394 LKMAISEQKDHSEKVESDTDTYDSNDSEEDPSFDILEETQASFSKLSINNKAKSGYSISK 215 L + E+ D+SE SD++ DSNDS++DP++DI EETQ+ FS LS+ K+KS Sbjct: 7 LPNVVMEEDDYSETEGSDSE--DSNDSQDDPTYDIFEETQSGFSNLSMEKKSKSRIQKEM 64 Query: 214 XXXXXXXXXXXXXXXE-LDKKDQKCYXXXXXXXXXXXIDKLKVDQCKLYLRKNGLRLTGN 38 LD+KD+K + ++KLKVDQCK+YLRKNGLRLTGN Sbjct: 65 DMGFVEDLDDVEIVAPVLDEKDEKSFEMVQKMIEAGQLEKLKVDQCKVYLRKNGLRLTGN 124 Query: 37 KDTLIGRIKEHL 2 K+TLI RIKEHL Sbjct: 125 KETLIQRIKEHL 136 >ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like [Glycine max] Length = 463 Score = 90.1 bits (222), Expect = 2e-16 Identities = 54/115 (46%), Positives = 68/115 (59%) Frame = -2 Query: 346 SDTDTYDSNDSEEDPSFDILEETQASFSKLSINNKAKSGYSISKXXXXXXXXXXXXXXXE 167 SD D+ + +DS+EDP FD+LEET + FS LS+ +KAK+ K Sbjct: 20 SDPDS-EWDDSKEDPDFDLLEETHSKFSILSLKHKAKARVVEDKGLGEEVNA-------- 70 Query: 166 LDKKDQKCYXXXXXXXXXXXIDKLKVDQCKLYLRKNGLRLTGNKDTLIGRIKEHL 2 D + + ++KLKVD+CKLYLRKNGLRLTGNKDTLI RIKEHL Sbjct: 71 -SAHDGENFQKVQKLIQVGPLEKLKVDECKLYLRKNGLRLTGNKDTLIQRIKEHL 124 >emb|CAD36023.1| transcription factor R18 [Craterostigma plantagineum] Length = 434 Score = 89.4 bits (220), Expect = 3e-16 Identities = 54/126 (42%), Positives = 69/126 (54%), Gaps = 1/126 (0%) Frame = -2 Query: 379 SEQKDHSEKVESDTDTYDSNDSEEDPSFDILEETQASFSKLSINNKAKSGYSIS-KXXXX 203 S ++DH + +SD D Y S E+ +++L E ++F L I KAKS S K Sbjct: 3 SSEEDHHDGFDSDED-YTDGSSMENSDYEVLGEVSSTFLNLQIKGKAKSRIVKSTKDNLE 61 Query: 202 XXXXXXXXXXXELDKKDQKCYXXXXXXXXXXXIDKLKVDQCKLYLRKNGLRLTGNKDTLI 23 EL K+DQKCY ++ LKVDQCK+YLRK+ LRLTGNK TLI Sbjct: 62 EGVEVEKTGGPELSKEDQKCYETILTMVEGGQVESLKVDQCKIYLRKHKLRLTGNKATLI 121 Query: 22 GRIKEH 5 RIKEH Sbjct: 122 QRIKEH 127 >ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|222841665|gb|EEE79212.1| predicted protein [Populus trichocarpa] Length = 515 Score = 75.5 bits (184), Expect = 4e-12 Identities = 52/140 (37%), Positives = 70/140 (50%), Gaps = 16/140 (11%) Frame = -2 Query: 376 EQKDHSEKVESDTDTYDSNDSEEDPSFDILEETQASFSKLSINNKAKSGYSISKXXXXXX 197 EQ++ ES D DS+ DPS+ I+EET+++ S+LSI K+KS ++K Sbjct: 12 EQEEEVYSTESGGSDPDY-DSDTDPSYSIIEETRSNLSRLSIKKKSKS--RVAKDLDLSF 68 Query: 196 XXXXXXXXXELDKKDQKCYXXXXXXXXXXXI----------------DKLKVDQCKLYLR 65 +L + D+K Y + LKV+QCK+YLR Sbjct: 69 DKDPGEKETKLAEVDEKSYEEVQKIIQDSLRLGFDFLLCDVMEAGKLEGLKVEQCKVYLR 128 Query: 64 KNGLRLTGNKDTLIGRIKEH 5 KN LRLTG KDTLI RIKEH Sbjct: 129 KNKLRLTGKKDTLIQRIKEH 148 >ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis sativus] gi|449480674|ref|XP_004155964.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis sativus] Length = 498 Score = 71.2 bits (173), Expect = 8e-11 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 2/114 (1%) Frame = -2 Query: 337 DTYDSNDSEEDPSFDILEETQASFSKLSINNKAKSGYSI-SKXXXXXXXXXXXXXXXELD 161 D YDS+D E DPS+ I + T + S+ SI K K + + ++ Sbjct: 28 DDYDSDDLECDPSYSIQKRTNSKTSRTSIRKKLKPLDIVDTNLIEDSDIDDVVPNIPIIN 87 Query: 160 KKDQK-CYXXXXXXXXXXXIDKLKVDQCKLYLRKNGLRLTGNKDTLIGRIKEHL 2 +KD+K ++KLKV+QCK YLR NGLRL+G KD LI RIKEHL Sbjct: 88 EKDEKDTREVLSIIKAGGKLEKLKVEQCKSYLRNNGLRLSGTKDVLIQRIKEHL 141