BLASTX nr result

ID: Panax21_contig00021952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021952
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309168.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-20
ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus com...    98   3e-18
ref|XP_002323638.1| predicted protein [Populus trichocarpa] gi|2...    97   6e-18
ref|XP_002265215.1| PREDICTED: F-box/LRR-repeat protein 3 [Vitis...    93   8e-17
ref|XP_003522022.1| PREDICTED: F-box/LRR-repeat protein 3-like [...    89   2e-15

>ref|XP_002309168.1| predicted protein [Populus trichocarpa] gi|222855144|gb|EEE92691.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  103 bits (258), Expect = 5e-20
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +1

Query: 739 LCFLPG*ITEKCLPQILKLQNLEHLVLEGCIGIDDDSLAALKHGFKTLQTLNMSSCENVS 918
           L +LP  IT KCLP ILKLQ LEH+ LEGC GIDDDSLAALKHG K+L+ L+MSSC+N+S
Sbjct: 211 LSYLP--ITNKCLPSILKLQYLEHIALEGCFGIDDDSLAALKHGCKSLKALDMSSCQNIS 268

Query: 919 HVGLSSLT 942
           HVGLSSLT
Sbjct: 269 HVGLSSLT 276


>ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus communis]
           gi|223534001|gb|EEF35723.1| F-box protein, atfbl3,
           putative [Ricinus communis]
          Length = 669

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 48/67 (71%), Positives = 57/67 (85%)
 Frame = +1

Query: 739 LCFLPG*ITEKCLPQILKLQNLEHLVLEGCIGIDDDSLAALKHGFKTLQTLNMSSCENVS 918
           L +LP  IT KCLP ILKL++LE LVLEGC GIDD+SL A KHG K+L+TL+MSSC+N+S
Sbjct: 214 LSYLP--ITNKCLPSILKLKSLEDLVLEGCFGIDDESLTAFKHGCKSLKTLDMSSCQNIS 271

Query: 919 HVGLSSL 939
           HVGLSSL
Sbjct: 272 HVGLSSL 278


>ref|XP_002323638.1| predicted protein [Populus trichocarpa] gi|222868268|gb|EEF05399.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 47/67 (70%), Positives = 58/67 (86%)
 Frame = +1

Query: 739 LCFLPG*ITEKCLPQILKLQNLEHLVLEGCIGIDDDSLAALKHGFKTLQTLNMSSCENVS 918
           L +LP  IT KCLP ILKLQ+LE +VLEGC GIDDDSLAALKHG K+++ L++SSC+++S
Sbjct: 213 LSYLP--ITNKCLPSILKLQHLEDIVLEGCFGIDDDSLAALKHGCKSMKALDISSCQHIS 270

Query: 919 HVGLSSL 939
           HVGLSSL
Sbjct: 271 HVGLSSL 277


>ref|XP_002265215.1| PREDICTED: F-box/LRR-repeat protein 3 [Vitis vinifera]
           gi|297735597|emb|CBI18091.3| unnamed protein product
           [Vitis vinifera]
          Length = 663

 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = +1

Query: 739 LCFLPG*ITEKCLPQILKLQNLEHLVLEGCIGIDDDSLAALKHGFKTLQTLNMSSCENVS 918
           L +LP  IT KCLP IL+LQ LE L+L GC  IDDDSL ALKHG K+L+ L+MSSC+NVS
Sbjct: 209 LSYLP--ITNKCLPCILQLQYLEDLILVGCFSIDDDSLVALKHGCKSLKKLDMSSCQNVS 266

Query: 919 HVGLSSLT 942
           HVGLSSLT
Sbjct: 267 HVGLSSLT 274


>ref|XP_003522022.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
          Length = 669

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 47/70 (67%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
 Frame = +1

Query: 739 LCFLPG*ITEKCLPQILKLQNLEHLVLEGCIGIDDDSLAA--LKHGFKTLQTLNMSSCEN 912
           L +LP  ITEKCLP I KLQ+LE LVLEGC GIDDDSL    LK G KTL+ L++S C+N
Sbjct: 213 LSYLP--ITEKCLPSIFKLQHLEDLVLEGCFGIDDDSLDVDLLKQGCKTLKRLDISGCQN 270

Query: 913 VSHVGLSSLT 942
           +SHVGLS LT
Sbjct: 271 ISHVGLSKLT 280


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