BLASTX nr result
ID: Panax21_contig00021936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00021936
(1055 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 177 4e-92
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 185 2e-82
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 174 1e-81
gb|AAP43914.1| integrase [Gossypium raimondii] 150 2e-81
emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera] 162 3e-79
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 177 bits (450), Expect(4) = 4e-92
Identities = 90/145 (62%), Positives = 106/145 (73%)
Frame = +1
Query: 214 LGIGAMLMHGGKLVAYFNEKLSGTALNYPTYDKDLYALVRALETLQHYLWPKEFVIHTDH 393
+GIG +LM K +AYF+EKL G LNYPTYDK+LYALVRAL+T QHYLWPKEFVIHTDH
Sbjct: 1215 VGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDH 1274
Query: 394 ESLMYLKGQQKLNKRHAR*MEFIETFSHAIRYKQGKEKENVVANAXXXXXXXXXXXXXXX 573
ESL +LKGQQKLNKRHAR +EFIETF + I+YK+G K+NVVA+A
Sbjct: 1275 ESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKG--KDNVVADALSRRYVLLSSLDAKL 1332
Query: 574 VGFEQTKELDALDHDFREEFKSCEK 648
+GFE K L A D DF + + SCEK
Sbjct: 1333 LGFEHIKSLYANDSDFEKIYSSCEK 1357
Score = 100 bits (248), Expect(4) = 4e-92
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +1
Query: 892 NGLYTPLPIPNEPWIDLSMDFVLGLPRSKHGYDSIFVVVDRFSKMAHFIPCHKT 1053
+GLYTPLPIP+ PW D+SMDFV+GLPR++ G DSIFVVVDRFSKMAHFIPCHKT
Sbjct: 1442 HGLYTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKT 1495
Score = 91.7 bits (226), Expect(4) = 4e-92
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +2
Query: 656 GKYFNHDEFLFRENKLCILVCSLRELLVRESHGDGLMGHFGVDKTLAMLREHFYWPHMTH 835
GKY+ HD FLF +N+LCI SLREL +RE+HG GLMGHFGV KT+ ++++HF+WPHM
Sbjct: 1361 GKYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKR 1420
Query: 836 E 838
+
Sbjct: 1421 D 1421
Score = 38.9 bits (89), Expect(4) = 4e-92
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 822 HT*HMKRDVERICDMCITCRQDK 890
H HMKRDVERIC+ C TC+Q K
Sbjct: 1414 HWPHMKRDVERICERCPTCKQAK 1436
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 185 bits (470), Expect(4) = 2e-82
Identities = 91/145 (62%), Positives = 111/145 (76%)
Frame = +1
Query: 214 LGIGAMLMHGGKLVAYFNEKLSGTALNYPTYDKDLYALVRALETLQHYLWPKEFVIHTDH 393
+GIGA+LM KL+A+F+EKL G LNYPTYDK+LYALVRAL+ QHYLWPK FVIHTDH
Sbjct: 724 IGIGAVLMQDQKLIAFFSEKLGGATLNYPTYDKELYALVRALQRWQHYLWPKVFVIHTDH 783
Query: 394 ESLMYLKGQQKLNKRHAR*MEFIETFSHAIRYKQGKEKENVVANAXXXXXXXXXXXXXXX 573
ESL +LKGQQKLNKRHAR +EFIETF++ I+YK+G K+NVVA+A
Sbjct: 784 ESLKHLKGQQKLNKRHARWVEFIETFAYVIKYKKG--KDNVVADALSQRYTLLSTLNVKL 841
Query: 574 VGFEQTKELDALDHDFREEFKSCEK 648
+GFEQ KE+ DHDF+E +K+CEK
Sbjct: 842 MGFEQIKEVYETDHDFQEVYKACEK 866
Score = 93.6 bits (231), Expect(4) = 2e-82
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +2
Query: 644 KRMSGKYFNHDEFLFRENKLCILVCSLRELLVRESHGDGLMGHFGVDKTLAMLREHFYWP 823
K SG+YF D+FLF EN+LC+ CSLR+L VRE+HG GLMGHFG+ KTL ++ EHF WP
Sbjct: 866 KFASGRYFRQDKFLFYENRLCVPNCSLRDLFVREAHGGGLMGHFGIAKTLEVMTEHFRWP 925
Query: 824 HM 829
HM
Sbjct: 926 HM 927
Score = 64.7 bits (156), Expect(4) = 2e-82
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +1
Query: 892 NGLYTPLPIPNEPWIDLSMDFVLGLPRSKHGYDSIFVVVDRFSKMAHFIP 1041
NGLYTPLPIP PW D+SMDFV+GLPR+ G DSIFVV F + F P
Sbjct: 951 NGLYTPLPIPKHPWNDISMDFVMGLPRT--GKDSIFVVYSPFQIVYGFNP 998
Score = 32.3 bits (72), Expect(4) = 2e-82
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 831 HMKRDVERICDMCITCRQDK 890
HMK DV+RIC C TC+Q K
Sbjct: 926 HMKCDVKRICGRCNTCKQAK 945
>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
Length = 1281
Score = 174 bits (440), Expect(4) = 1e-81
Identities = 88/147 (59%), Positives = 106/147 (72%)
Frame = +1
Query: 217 GIGAMLMHGGKLVAYFNEKLSGTALNYPTYDKDLYALVRALETLQHYLWPKEFVIHTDHE 396
GI A+LM + + YF+EKL+GT LNYPTYDK+LYALVRALET QHYLWPKEFVIHTDHE
Sbjct: 743 GIRAILMQEKRPITYFSEKLNGTTLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHE 802
Query: 397 SLMYLKGQQKLNKRHAR*MEFIETFSHAIRYKQGKEKENVVANAXXXXXXXXXXXXXXXV 576
SL +LKGQ KLN+RHA+ +EFIETF + I+YKQG KEN+VA+A +
Sbjct: 803 SLKHLKGQGKLNRRHAKWVEFIETFLYVIKYKQG--KENIVADALSRRYALVSTLNAKLL 860
Query: 577 GFEQTKELDALDHDFREEFKSCEKNVW 657
GFE KEL A D DF + +CEK +
Sbjct: 861 GFEYVKELYANDDDFASVYGACEKTTF 887
Score = 93.6 bits (231), Expect(4) = 1e-81
Identities = 40/53 (75%), Positives = 48/53 (90%)
Frame = +1
Query: 892 NGLYTPLPIPNEPWIDLSMDFVLGLPRSKHGYDSIFVVVDRFSKMAHFIPCHK 1050
+GLYTPLP+P+ PW+D+SMDFVLGLPRS++G SIFVVVDRFSKM +FI CHK
Sbjct: 957 HGLYTPLPVPSAPWVDISMDFVLGLPRSRNGRXSIFVVVDRFSKMTYFISCHK 1009
Score = 73.2 bits (178), Expect(4) = 1e-81
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +2
Query: 692 ENKLCILVCSLRELLVRESHGDGLMGHFGVDKTLAMLREHFYWPHM 829
EN+LC+ S+RELLVRE+HG GLMGHFGV KTL +L EHF+WP M
Sbjct: 888 ENRLCVPNSSMRELLVREAHGGGLMGHFGVRKTLDVLHEHFFWPKM 933
Score = 32.3 bits (72), Expect(4) = 1e-81
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3
Query: 834 MKRDVERICDMCITCRQDK 890
MK DVER C CITCRQ K
Sbjct: 933 MKCDVERACARCITCRQAK 951
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 150 bits (379), Expect(4) = 2e-81
Identities = 79/137 (57%), Positives = 94/137 (68%)
Frame = +1
Query: 235 MHGGKLVAYFNEKLSGTALNYPTYDKDLYALVRALETLQHYLWPKEFVIHTDHESLMYLK 414
M K +AYF+EKL G LNY TYDK+LYALVRALE QHYL KEFVIHTDHESL +LK
Sbjct: 1 MQDSKPLAYFSEKLGGAHLNYSTYDKELYALVRALEVWQHYLLRKEFVIHTDHESLKHLK 60
Query: 415 GQQKLNKRHAR*MEFIETFSHAIRYKQGKEKENVVANAXXXXXXXXXXXXXXXVGFEQTK 594
GQ KLNKRHAR +EFIE+F + IRYK+G K+N+VA+A +GFE K
Sbjct: 61 GQGKLNKRHARWVEFIESFPYGIRYKKG--KDNIVADALSRRYTLLSTLHTKLLGFEYLK 118
Query: 595 ELDALDHDFREEFKSCE 645
+L A D DF + +CE
Sbjct: 119 DLYATDSDFASIYDACE 135
Score = 101 bits (251), Expect(4) = 2e-81
Identities = 43/54 (79%), Positives = 50/54 (92%)
Frame = +1
Query: 892 NGLYTPLPIPNEPWIDLSMDFVLGLPRSKHGYDSIFVVVDRFSKMAHFIPCHKT 1053
+GLYTPLP+P+ PW D+S+DFV+GLP +KHG DSIFVVVDRFSKMAHFIPCHKT
Sbjct: 221 HGLYTPLPVPSSPWTDISIDFVIGLPITKHGRDSIFVVVDRFSKMAHFIPCHKT 274
Score = 87.8 bits (216), Expect(4) = 2e-81
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = +2
Query: 659 KYFNHDEFLFRENKLCILVCSLRELLVRESHGDGLMGHFGVDKTLAMLREHFYWPHM 829
K++ HD +LF+ N+LC+ CS+RELLVRE+H GLMGHFGV KT +L EHFYWP+M
Sbjct: 141 KFYKHDGYLFQNNRLCLPKCSMRELLVREAHSGGLMGHFGVTKTYDVLHEHFYWPNM 197
Score = 33.1 bits (74), Expect(4) = 2e-81
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 831 HMKRDVERICDMCITCRQDK 890
+M++ VE+IC CITC+QDK
Sbjct: 196 NMRKLVEKICSTCITCKQDK 215
>emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]
Length = 364
Score = 162 bits (409), Expect(4) = 3e-79
Identities = 81/133 (60%), Positives = 97/133 (72%)
Frame = +1
Query: 259 YFNEKLSGTALNYPTYDKDLYALVRALETLQHYLWPKEFVIHTDHESLMYLKGQQKLNKR 438
YF+EKL+G LNYPTYDK+LYALVRALET QHYLWPKEFVIHTDHESL +LKGQ KLN+R
Sbjct: 9 YFSEKLNGATLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRR 68
Query: 439 HAR*MEFIETFSHAIRYKQGKEKENVVANAXXXXXXXXXXXXXXXVGFEQTKELDALDHD 618
HA+ +EFIETF + I+YKQ KEN+VA+A +GFE KEL A D+D
Sbjct: 69 HAKWVEFIETFPYVIKYKQC--KENIVADALSRRYALVSTLNAKLLGFEYVKELYANDND 126
Query: 619 FREEFKSCEKNVW 657
F + +CEK +
Sbjct: 127 FASVYGACEKTAF 139
Score = 92.4 bits (228), Expect(4) = 3e-79
Identities = 40/54 (74%), Positives = 48/54 (88%)
Frame = +1
Query: 892 NGLYTPLPIPNEPWIDLSMDFVLGLPRSKHGYDSIFVVVDRFSKMAHFIPCHKT 1053
+GLYT LP+P+ PW+++ MDFVLGLPRS++G DSIFVVVDRFSKM HFI CHKT
Sbjct: 221 HGLYTLLPVPSAPWVNIYMDFVLGLPRSRNGRDSIFVVVDRFSKMTHFISCHKT 274
Score = 76.6 bits (187), Expect(4) = 3e-79
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +2
Query: 644 KRMSGKYFNHDEFLFRENKLCILVCSLRELLVRESHGDGLMGHFGVDKTLAMLREHFYWP 823
K GK++ D +LFR+N LC+ S+ ELLVRE+HG MGHFGV KTL +L EHF+WP
Sbjct: 136 KTAFGKFYRLDGYLFRKNILCVPNSSMCELLVREAHGGDXMGHFGVRKTLDVLHEHFFWP 195
Query: 824 HMTHE 838
M +
Sbjct: 196 KMKRD 200
Score = 34.3 bits (77), Expect(4) = 3e-79
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 834 MKRDVERICDMCITCRQDK 890
MKRDVER C CITCR+ K
Sbjct: 197 MKRDVERACARCITCRRTK 215