BLASTX nr result

ID: Panax21_contig00021931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021931
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137473.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   192   5e-47
gb|AFK36885.1| unknown [Medicago truncatula]                          177   2e-42
ref|NP_001236919.1| uncharacterized protein LOC100500620 [Glycin...   177   2e-42
ref|XP_002317917.1| predicted protein [Populus trichocarpa] gi|1...   176   5e-42
ref|XP_003543160.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   175   7e-42

>ref|XP_004137473.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 10-B-like isoform 1 [Cucumis sativus]
           gi|449439401|ref|XP_004137474.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           10-B-like isoform 2 [Cucumis sativus]
           gi|449503123|ref|XP_004161845.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           10-B-like [Cucumis sativus]
          Length = 105

 Score =  192 bits (488), Expect = 5e-47
 Identities = 90/98 (91%), Positives = 91/98 (92%), Gaps = 1/98 (1%)
 Frame = +1

Query: 70  MGRKKEVVFDEGAPD-FDPENPYKDPVAMLEMREHIVREKWIDIETAKILREKLRWCYRI 246
           MGRKK V FDE  PD FDPENPYKDPVAMLEMRE+IVREKWIDIE AKILREKLRWCYRI
Sbjct: 1   MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60

Query: 247 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPDLHGPK 360
           EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHP LHGPK
Sbjct: 61  EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK 98


>gb|AFK36885.1| unknown [Medicago truncatula]
          Length = 106

 Score =  177 bits (449), Expect = 2e-42
 Identities = 83/99 (83%), Positives = 88/99 (88%), Gaps = 2/99 (2%)
 Frame = +1

Query: 70  MGRKKEVV-FDEGAPD-FDPENPYKDPVAMLEMREHIVREKWIDIETAKILREKLRWCYR 243
           MGRKK  V FD+  PD FDP NPYKDPVAMLEMREHIVREKWI IE AKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFDDNPPDDFDPANPYKDPVAMLEMREHIVREKWIQIEKAKIIREKLRWCYR 60

Query: 244 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPDLHGPK 360
           IEG+NH QKCRHLV+QYL+STRGIGWGKDGRHP LHGPK
Sbjct: 61  IEGINHHQKCRHLVKQYLESTRGIGWGKDGRHPSLHGPK 99


>ref|NP_001236919.1| uncharacterized protein LOC100500620 [Glycine max]
           gi|255630770|gb|ACU15746.1| unknown [Glycine max]
          Length = 106

 Score =  177 bits (449), Expect = 2e-42
 Identities = 84/99 (84%), Positives = 87/99 (87%), Gaps = 2/99 (2%)
 Frame = +1

Query: 70  MGRKKEVV-FDEGAPD-FDPENPYKDPVAMLEMREHIVREKWIDIETAKILREKLRWCYR 243
           MGRKK  V F+E  PD FDP NPYKDPVAMLEMREHIVREKWI IE AKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFEESPPDDFDPANPYKDPVAMLEMREHIVREKWIQIEKAKIIREKLRWCYR 60

Query: 244 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPDLHGPK 360
           IEGVNHLQKCRHLV QYL+STRGIGWGKDGRHP LH PK
Sbjct: 61  IEGVNHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPK 99


>ref|XP_002317917.1| predicted protein [Populus trichocarpa] gi|118484036|gb|ABK93904.1|
           unknown [Populus trichocarpa]
           gi|118485134|gb|ABK94430.1| unknown [Populus
           trichocarpa] gi|222858590|gb|EEE96137.1| predicted
           protein [Populus trichocarpa]
          Length = 107

 Score =  176 bits (445), Expect = 5e-42
 Identities = 84/99 (84%), Positives = 87/99 (87%), Gaps = 2/99 (2%)
 Frame = +1

Query: 70  MGRKKEVV-FDEGAPD-FDPENPYKDPVAMLEMREHIVREKWIDIETAKILREKLRWCYR 243
           MGRKK V  F+E  PD FDP NPYKDPV MLEMREHIVREKWIDIE AKILRE+LRWCYR
Sbjct: 1   MGRKKGVAEFEESPPDDFDPSNPYKDPVVMLEMREHIVREKWIDIEKAKILRERLRWCYR 60

Query: 244 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPDLHGPK 360
           IEG+NHLQKCRHLVQQYLDSTRGIGWGKD R P LHGPK
Sbjct: 61  IEGINHLQKCRHLVQQYLDSTRGIGWGKDQRPPCLHGPK 99


>ref|XP_003543160.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 10-B [Glycine max]
          Length = 106

 Score =  175 bits (444), Expect = 7e-42
 Identities = 83/99 (83%), Positives = 87/99 (87%), Gaps = 2/99 (2%)
 Frame = +1

Query: 70  MGRKKEVV-FDEGAPD-FDPENPYKDPVAMLEMREHIVREKWIDIETAKILREKLRWCYR 243
           MGRKK  V F+E  PD FDP +PYKDPVAMLEMREHIVREKWI IE AKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFEESPPDDFDPAHPYKDPVAMLEMREHIVREKWIQIEKAKIIREKLRWCYR 60

Query: 244 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPDLHGPK 360
           IEGVNHLQKCRHLV QYL+STRGIGWGKDGRHP LH PK
Sbjct: 61  IEGVNHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPK 99


Top