BLASTX nr result

ID: Panax21_contig00021901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021901
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-40
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              137   7e-37
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   137   7e-37
ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like...   139   2e-35
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   141   4e-35

>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  148 bits (373), Expect(2) = 4e-40
 Identities = 77/111 (69%), Positives = 86/111 (77%)
 Frame = +2

Query: 89  RPEETCLPPELCVNCSHDLKLGLCYEAANHLQGMKDMLISISNDLLDNVSNLDPDQIEKL 268
           RPEE  +PPELC NCSH  KLGLC EAA HLQ MKDMLI++SNDLLDN + L   QI+KL
Sbjct: 263 RPEEISVPPELCSNCSHGFKLGLCPEAAKHLQEMKDMLIAVSNDLLDNAAELSQAQIDKL 322

Query: 269 RQDRLQLDKQIQELEKHLRTTSADEERQKSHFSASTAAPRTFNYETPPTVA 421
           RQDRLQL+KQIQ+LEK+LR    DEERQKSHFSAST   R   YETP + A
Sbjct: 323 RQDRLQLNKQIQQLEKYLR----DEERQKSHFSASTLV-RNLQYETPQSAA 368



 Score = 41.6 bits (96), Expect(2) = 4e-40
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 3   VMEHYQSSGTPQPSISKFPPFT 68
           VMEHYQ++ TPQP+ISKFPP T
Sbjct: 232 VMEHYQATCTPQPAISKFPPIT 253


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  137 bits (346), Expect(2) = 7e-37
 Identities = 74/115 (64%), Positives = 86/115 (74%)
 Frame = +2

Query: 77  VNDTRPEETCLPPELCVNCSHDLKLGLCYEAANHLQGMKDMLISISNDLLDNVSNLDPDQ 256
           VN  + EET LP ELC NCSH  KLGLC EAANHLQ +KDMLI ISN+LLDNV +L   Q
Sbjct: 236 VNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIVISNELLDNV-DLTSVQ 294

Query: 257 IEKLRQDRLQLDKQIQELEKHLRTTSADEERQKSHFSASTAAPRTFNYETPPTVA 421
           +EKLRQDRL L+KQIQ+LE HL + S DEER+ S+FSAST  P    ++TPP  A
Sbjct: 295 VEKLRQDRLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTPWA-QFQTPPATA 348



 Score = 41.2 bits (95), Expect(2) = 7e-37
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   VMEHYQSSGTPQPSISKFPPFT 68
           VMEHYQS+ TPQPSISK PP T
Sbjct: 209 VMEHYQSTCTPQPSISKLPPVT 230


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score =  137 bits (346), Expect(2) = 7e-37
 Identities = 74/115 (64%), Positives = 86/115 (74%)
 Frame = +2

Query: 77  VNDTRPEETCLPPELCVNCSHDLKLGLCYEAANHLQGMKDMLISISNDLLDNVSNLDPDQ 256
           VN  + EET LP ELC NCSH  KLGLC EAANHLQ +KDMLI ISN+LLDNV +L   Q
Sbjct: 225 VNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIVISNELLDNV-DLTSVQ 283

Query: 257 IEKLRQDRLQLDKQIQELEKHLRTTSADEERQKSHFSASTAAPRTFNYETPPTVA 421
           +EKLRQDRL L+KQIQ+LE HL + S DEER+ S+FSAST  P    ++TPP  A
Sbjct: 284 VEKLRQDRLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTPWA-QFQTPPATA 337



 Score = 41.2 bits (95), Expect(2) = 7e-37
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   VMEHYQSSGTPQPSISKFPPFT 68
           VMEHYQS+ TPQPSISK PP T
Sbjct: 198 VMEHYQSTCTPQPSISKLPPVT 219


>ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
          Length = 1160

 Score =  139 bits (349), Expect(2) = 2e-35
 Identities = 69/110 (62%), Positives = 84/110 (76%)
 Frame = +2

Query: 80  NDTRPEETCLPPELCVNCSHDLKLGLCYEAANHLQGMKDMLISISNDLLDNVSNLDPDQI 259
           N  R  +  LPPELC++C H  KLG C EAA+HLQ MKD LI+ISN+LLDN  NL+  QI
Sbjct: 210 NFARQGDNVLPPELCLDCIHGYKLGFCPEAASHLQEMKDNLIAISNELLDNGENLNSTQI 269

Query: 260 EKLRQDRLQLDKQIQELEKHLRTTSADEERQKSHFSASTAAPRTFNYETP 409
            KLR DR QL+KQIQ+LEK++ + + +EERQKSHFSASTA P +F YETP
Sbjct: 270 AKLRHDRSQLNKQIQQLEKYIHSGNLNEERQKSHFSASTAPPTSFVYETP 319



 Score = 35.4 bits (80), Expect(2) = 2e-35
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   VMEHYQSSGTPQPSISKFPPFT 68
           ++E +QS+ TP+PSISKFPP T
Sbjct: 182 IVEEHQSTCTPKPSISKFPPIT 203


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score =  141 bits (355), Expect(2) = 4e-35
 Identities = 67/113 (59%), Positives = 87/113 (76%)
 Frame = +2

Query: 80  NDTRPEETCLPPELCVNCSHDLKLGLCYEAANHLQGMKDMLISISNDLLDNVSNLDPDQI 259
           N  R EE+  P ELC NCSH  K+ LC EA++HLQ +KD LISISNDLLDNV+NL P QI
Sbjct: 315 NVARQEESNYPDELCTNCSHGFKIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQI 374

Query: 260 EKLRQDRLQLDKQIQELEKHLRTTSADEERQKSHFSASTAAPRTFNYETPPTV 418
           +KLRQ+R+ L+KQIQ LE+H+   + +EER++SH  A+T  P+TF++ETPP V
Sbjct: 375 DKLRQERVHLNKQIQLLERHISLDAVNEERRRSHLFATTVTPKTFHFETPPGV 427



 Score = 32.0 bits (71), Expect(2) = 4e-35
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 3   VMEHYQSSG--TPQPSISKFPPFT 68
           ++E YQS    TPQPS+SK PP T
Sbjct: 285 IVEQYQSQSACTPQPSVSKLPPIT 308


Top