BLASTX nr result

ID: Panax21_contig00021900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021900
         (1473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   462   e-127
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   380   e-103
gb|ABK92768.1| unknown [Populus trichocarpa]                          380   e-103
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   371   e-100

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
            gi|296088512|emb|CBI37503.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  462 bits (1189), Expect = e-127
 Identities = 210/376 (55%), Positives = 282/376 (75%), Gaps = 1/376 (0%)
 Frame = +3

Query: 111  DVLVDVLSRLPTRTLLGMRCVSKEWHRLIADRSLVQLQLKRTVLSQLTSGFFYQERFKWC 290
            D+ +DVLSRLPT+TLLG++CV K W R+I+DRS +Q  L+R    +  +GFF+QER++WC
Sbjct: 5    DICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRP---EPLAGFFFQERYQWC 61

Query: 291  DDDIRFVSYIPADMEGAEVQGRVLDFLPENVVIQGVSNGLICCRSCFPSPYPLIYVCNPI 470
            D+DI  +SYIPA MEG +VQ  +  FLPE+VVI G  NGL+CCRS FPSP P I+VCNP 
Sbjct: 62   DEDISTISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPSIFVCNPS 121

Query: 471  NREWVSLPFPVYDSTSSLALAFDPFCDPIDVSTNFKVVNIYEIETEMED-LLFSFDVYSS 647
            N++W+ L     D  SS  LAF+PF  PID+ TNFKVV + + +T+M+D   FSF++YSS
Sbjct: 122  NKQWIRLLETTPDKESSYGLAFNPFQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEIYSS 181

Query: 648  QTGSWRRSVEICQCRHNFFKNKGLFVKGFLYWLMDGDQILMFDLEHELSWLITVPVPRAE 827
            Q G+W++S EICQC HN FKNKG+FV G L+WL DGDQ+L F++E+ELSWLI+ P P   
Sbjct: 182  QAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFPTIH 241

Query: 828  FNSVPEMCIGEFEGQLHYVLLSEDGLLLWVLEDHFGSQWRLKYSINLEKLEDENPLYLYN 1007
              ++PEMCIGE  G+LHY+++SEDGL +W LED++ S W L +S  LE +E+EN   LYN
Sbjct: 242  LTAIPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNWSLVHSTTLEVMEEENSQLLYN 301

Query: 1008 TRERIVDRMTIDTLPWMDPLTFKDGILFMRVSADIFLFNFETGKMKKLCNLSMLGPNYMA 1187
            TR+R+  R++ID++PWMDPL FKDG+L MRVS  I L+   T KM++LCNLS LG N + 
Sbjct: 302  TRDRVAQRISIDSIPWMDPLAFKDGLLLMRVSTKIILYCIGTRKMEELCNLSKLGRNSIF 361

Query: 1188 SPIVLPYTMSLVPLGK 1235
             P+V+PY+++L PL +
Sbjct: 362  GPLVIPYSLNLAPLSQ 377


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
            gi|223535221|gb|EEF36899.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 375

 Score =  380 bits (976), Expect = e-103
 Identities = 183/377 (48%), Positives = 255/377 (67%)
 Frame = +3

Query: 99   SAGSDVLVDVLSRLPTRTLLGMRCVSKEWHRLIADRSLVQLQLKRTVLSQLTSGFFYQER 278
            S  +D+  DVLSR P + L+ ++ VSK W  LI ++S +Q+Q +R    +  SGFF+Q+R
Sbjct: 7    SLNTDISFDVLSRFPAKDLVELKRVSKGWQHLIMNQSFIQIQSRRR---EPLSGFFFQQR 63

Query: 279  FKWCDDDIRFVSYIPADMEGAEVQGRVLDFLPENVVIQGVSNGLICCRSCFPSPYPLIYV 458
            F+W + DI  ++YIP   EG E+  +V DFLP++VV+    NGL+CCRSCFP   P I+V
Sbjct: 64   FQWSEYDIETINYIPVKWEGLELHKKVFDFLPQDVVLLTTCNGLVCCRSCFPFELPAIFV 123

Query: 459  CNPINREWVSLPFPVYDSTSSLALAFDPFCDPIDVSTNFKVVNIYEIETEMEDLLFSFDV 638
            CNP+N+EWV L +   D   S+ALAFDP  D    S NFK+          E L FSFD+
Sbjct: 124  CNPLNKEWVKLDWTEPDKEHSIALAFDPLLDISGNSANFKLD---------EQLYFSFDI 174

Query: 639  YSSQTGSWRRSVEICQCRHNFFKNKGLFVKGFLYWLMDGDQILMFDLEHELSWLITVPVP 818
            YSS+TGSW  S +IC C  N  KNKG++++G L+WL D DQIL FD+++EL++LI+ PVP
Sbjct: 175  YSSRTGSWNLSKDICWCNSNLHKNKGVYIRGVLHWLTDEDQILTFDVDNELAFLISAPVP 234

Query: 819  RAEFNSVPEMCIGEFEGQLHYVLLSEDGLLLWVLEDHFGSQWRLKYSINLEKLEDENPLY 998
             AEF++ P+ CIGE EG LHYV++SE+G  +W LED+F   W LKYS  L ++E E+P +
Sbjct: 235  AAEFSTAPKACIGELEGCLHYVMISEEGFHIWSLEDYFELNWLLKYSKTLAEMEQEHPKF 294

Query: 999  LYNTRERIVDRMTIDTLPWMDPLTFKDGILFMRVSADIFLFNFETGKMKKLCNLSMLGPN 1178
            L N +E +  +MT D  PW+D L FKDGIL +RVS  ++L++    KM+++C+ S  G +
Sbjct: 295  LLNMQELVKLQMTDDVSPWVDSLAFKDGILVLRVSTIVYLYDIIRSKMQEVCDNSKFGTS 354

Query: 1179 YMASPIVLPYTMSLVPL 1229
             M  P VLPY+M+LVPL
Sbjct: 355  SMYCPTVLPYSMTLVPL 371


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  380 bits (976), Expect = e-103
 Identities = 187/376 (49%), Positives = 259/376 (68%)
 Frame = +3

Query: 108  SDVLVDVLSRLPTRTLLGMRCVSKEWHRLIADRSLVQLQLKRTVLSQLTSGFFYQERFKW 287
            +D+  DVLSRL T+ LLG++CVSK W  LI+DRS +Q Q ++    +  SGFF+Q+R ++
Sbjct: 9    TDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQK---KEPLSGFFFQQRHRY 65

Query: 288  CDDDIRFVSYIPADMEGAEVQGRVLDFLPENVVIQGVSNGLICCRSCFPSPYPLIYVCNP 467
            C DDI+ ++Y P  +E   +Q  V  FLP++VV+  + NGL+CCRSC+P   P IYVCNP
Sbjct: 66   CPDDIKTITYFP--VERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYVCNP 123

Query: 468  INREWVSLPFPVYDSTSSLALAFDPFCDPIDVSTNFKVVNIYEIETEMEDLLFSFDVYSS 647
            +N EW  L +      S +ALAF+PF D     TNFKVV   + ETE E+  FSF++Y+S
Sbjct: 124  LNSEWWKLDWKEPGKESFIALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYAS 183

Query: 648  QTGSWRRSVEICQCRHNFFKNKGLFVKGFLYWLMDGDQILMFDLEHELSWLITVPVPRAE 827
            +T +W+ S E+C C ++  KN+G+F  G L+WL DGDQIL F++E+EL+ LI+ P+P  E
Sbjct: 184  RTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLPAGE 243

Query: 828  FNSVPEMCIGEFEGQLHYVLLSEDGLLLWVLEDHFGSQWRLKYSINLEKLEDENPLYLYN 1007
            FN+ P  CIGE EGQL+YVL+SE+GL +WVLED+F S W LKYS  L ++E E+   + N
Sbjct: 244  FNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMIN 303

Query: 1008 TRERIVDRMTIDTLPWMDPLTFKDGILFMRVSADIFLFNFETGKMKKLCNLSMLGPNYMA 1187
               R++    ID  PWMDPL FKDG+L +R+S  I+L++ +T KM+++   S  G     
Sbjct: 304  LYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSWV 363

Query: 1188 SPIVLPYTMSLVPLGK 1235
            SPIVLPYTMSLVPLG+
Sbjct: 364  SPIVLPYTMSLVPLGR 379


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  379 bits (974), Expect = e-103
 Identities = 187/375 (49%), Positives = 258/375 (68%)
 Frame = +3

Query: 108  SDVLVDVLSRLPTRTLLGMRCVSKEWHRLIADRSLVQLQLKRTVLSQLTSGFFYQERFKW 287
            +D+  DVLSRL T+ LLG++CVSK W  LI+DRS +Q Q ++    +  SGFF+Q+R ++
Sbjct: 9    TDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQK---KEPLSGFFFQQRHRY 65

Query: 288  CDDDIRFVSYIPADMEGAEVQGRVLDFLPENVVIQGVSNGLICCRSCFPSPYPLIYVCNP 467
            C DDI+ ++Y P  +E   +Q  V  FLP++VV+  + NGL+CCRSC+P   P IYVCNP
Sbjct: 66   CPDDIKTITYFP--VERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYVCNP 123

Query: 468  INREWVSLPFPVYDSTSSLALAFDPFCDPIDVSTNFKVVNIYEIETEMEDLLFSFDVYSS 647
            +N EW  L +      S +ALAF+PF D     TNFKVV   + ETE E+  FSF++Y+S
Sbjct: 124  LNSEWWKLDWKEPGKESFIALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYAS 183

Query: 648  QTGSWRRSVEICQCRHNFFKNKGLFVKGFLYWLMDGDQILMFDLEHELSWLITVPVPRAE 827
            +T +W+ S E+C C ++  KN+G+F  G L+WL DGDQIL F++E+EL+ LI+ P+P  E
Sbjct: 184  RTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLPAGE 243

Query: 828  FNSVPEMCIGEFEGQLHYVLLSEDGLLLWVLEDHFGSQWRLKYSINLEKLEDENPLYLYN 1007
            FN+ P  CIGE EGQL+YVL+SE+GL +WVLED+F S W LKYS  L ++E E+   + N
Sbjct: 244  FNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMIN 303

Query: 1008 TRERIVDRMTIDTLPWMDPLTFKDGILFMRVSADIFLFNFETGKMKKLCNLSMLGPNYMA 1187
               R++    ID  PWMDPL FKDG+L +R+S  I+L++ +T KM+++   S  G     
Sbjct: 304  LYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSWV 363

Query: 1188 SPIVLPYTMSLVPLG 1232
            SPIVLPYTMSLVPLG
Sbjct: 364  SPIVLPYTMSLVPLG 378


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  371 bits (953), Expect = e-100
 Identities = 181/379 (47%), Positives = 257/379 (67%), Gaps = 6/379 (1%)
 Frame = +3

Query: 111  DVLVDVLSRLPTRTLLGMRCVSKEWHRLIADRSLVQLQLKRTVLSQLTSGFFYQERFKWC 290
            D+L DVLSRLPT+TLL MR VSK WHRLI DRS VQ Q ++  L+   SGF +QE+++ C
Sbjct: 6    DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLA--LSGFMFQEKYRKC 63

Query: 291  DDDIRFVSYIPADMEGAEVQGRVLDFLPENVVIQGVSNGLICCRSCFPSPYPL-----IY 455
              DI   +Y+P D + ++VQ  V  FLPE+VVI    NGL+CCRSCF + +       IY
Sbjct: 64   PIDISTFTYMPIDAD-SKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTIY 122

Query: 456  VCNPINREWVSLPFPVYDSTSSLALAFDPFCDPIDVSTNFKVVNIYEIETEMEDLLFSFD 635
            VCNP+ ++WVS      DS SS+ALAFDP  DP++ +TNFKVV I ++E E E++ ++F+
Sbjct: 123  VCNPLFKKWVSFEVAQLDSFSSIALAFDPILDPVNTATNFKVVRIQQLENEQEEMYYTFE 182

Query: 636  VYSSQTGSWRRSVEICQCRHNFFKNKGLFVKGFLYWLMDGDQILMFDLEHELSWLITVPV 815
            +YSS+TG+W+ S E+C    N  KN G + KG L+WL D DQIL FD E ELS L+  P+
Sbjct: 183  IYSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPI 242

Query: 816  PRAE-FNSVPEMCIGEFEGQLHYVLLSEDGLLLWVLEDHFGSQWRLKYSINLEKLEDENP 992
            P  E F   P  CIGE +G LH++++ EDG+++W L+D+F ++W LK+S  L+ +EDENP
Sbjct: 243  PALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFEAKWTLKHSKQLQMIEDENP 302

Query: 993  LYLYNTRERIVDRMTIDTLPWMDPLTFKDGILFMRVSADIFLFNFETGKMKKLCNLSMLG 1172
               +   + +  +      P+MDP  FKD +L MRV + ++ ++ ETGK+ ++CN++ LG
Sbjct: 303  NMFFKLYKIMQRKRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHTETGKVVEVCNVASLG 362

Query: 1173 PNYMASPIVLPYTMSLVPL 1229
            PN   SP V+PY++SL+PL
Sbjct: 363  PNPFVSPPVIPYSLSLIPL 381


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