BLASTX nr result

ID: Panax21_contig00021842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021842
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|...   446   e-123
ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-...   443   e-122
ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...   439   e-121
ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   370   e-100
ref|XP_004134327.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   357   2e-96

>ref|XP_002511850.1| Protein AFR, putative [Ricinus communis]
           gi|223549030|gb|EEF50519.1| Protein AFR, putative
           [Ricinus communis]
          Length = 353

 Score =  446 bits (1146), Expect = e-123
 Identities = 203/288 (70%), Positives = 235/288 (81%)
 Frame = -2

Query: 942 ETWIYALCKDKFGQLSCYVLDPNISRNGWKRIQGLPSHSLKRKGMGFEVLGKKIYLMGGC 763
           ETWIYALC+DKF Q+ CYVLDP+ SR  WK IQGLPSH LKRKGMGFE LGKK+Y +GGC
Sbjct: 66  ETWIYALCRDKFDQICCYVLDPDSSRRCWKLIQGLPSHCLKRKGMGFEALGKKLYFLGGC 125

Query: 762 GWIEDATDEVYCYDAAINTWSEAPPLSTARCYFACEALGDKIYAIGGLGSKSSDPHSWDT 583
           GW+EDATDE YCYD + N+W+EA  LSTARCYFACE +  KIYAIGGLGSK SDPHSWDT
Sbjct: 126 GWLEDATDEAYCYDVSRNSWTEATSLSTARCYFACEVMDGKIYAIGGLGSKLSDPHSWDT 185

Query: 582 YDSLTNCWKSHLDPNIVHDIEDSVVLDGKIYIRCGXXXXXXXXXXXXYDPSNGTWQHADT 403
           +D+  NCW+SH D NIV D+EDS+VLDGKIYIRCG            Y+P NGTWQHAD 
Sbjct: 186 FDAHKNCWESHSDANIVPDVEDSIVLDGKIYIRCGASSVSSHVYAVLYEPLNGTWQHADV 245

Query: 402 DMVSGWRGPGVVVDGSFYVLDQSSGTRLMLWKMDSREWVAVGRLSALLTRPPCRLVAIGK 223
           DM SGWRGP VVV    YVLDQSSGTRLM+W+ D REW+AVGRLS+LLTRPPCR+VAIGK
Sbjct: 246 DMASGWRGPAVVVXXCLYVLDQSSGTRLMIWRKDKREWMAVGRLSSLLTRPPCRIVAIGK 305

Query: 222 SIFVVGKRLSTVVFDVGNAGSLDGVRLSSSLPKLTYDGDVISCKSVAI 79
            IF++GK LSTVVFD+G  G+++GV +SSS+P L Y+ DVISCKS+A+
Sbjct: 306 RIFIIGKGLSTVVFDIGKTGNMEGVMVSSSIPGLNYEDDVISCKSLAL 353


>ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera]
           gi|297745280|emb|CBI40360.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  443 bits (1139), Expect = e-122
 Identities = 209/288 (72%), Positives = 236/288 (81%)
 Frame = -2

Query: 942 ETWIYALCKDKFGQLSCYVLDPNISRNGWKRIQGLPSHSLKRKGMGFEVLGKKIYLMGGC 763
           E WIYALC+DKF ++ CYVLDP  +R  WK I+G P  SLKRKGM FEVLGKK+YL+GGC
Sbjct: 72  EPWIYALCRDKFERVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKVYLLGGC 131

Query: 762 GWIEDATDEVYCYDAAINTWSEAPPLSTARCYFACEALGDKIYAIGGLGSKSSDPHSWDT 583
           GW+EDATDEVY YDA+ N WSEA PLSTARCYFACE L  KIYAIGGLGSKS+DPHSWDT
Sbjct: 132 GWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSNDPHSWDT 191

Query: 582 YDSLTNCWKSHLDPNIVHDIEDSVVLDGKIYIRCGXXXXXXXXXXXXYDPSNGTWQHADT 403
           Y+  TN WKSHLDPNIV DIEDS+VLD KIYIRCG            Y+PS+GTWQHAD 
Sbjct: 192 YNPHTNSWKSHLDPNIVPDIEDSIVLDEKIYIRCGTSGLTSHVYAVVYNPSHGTWQHADA 251

Query: 402 DMVSGWRGPGVVVDGSFYVLDQSSGTRLMLWKMDSREWVAVGRLSALLTRPPCRLVAIGK 223
           DMV GW+GP VVVDG+ YVLDQ  GTRLM+W+ +SR+WVAVGRLS LLT PPCRLVAIGK
Sbjct: 252 DMVLGWQGPAVVVDGTLYVLDQRLGTRLMMWQKESRKWVAVGRLSPLLTCPPCRLVAIGK 311

Query: 222 SIFVVGKRLSTVVFDVGNAGSLDGVRLSSSLPKLTYDGDVISCKSVAI 79
           SIFV+GK LSTVVFD+GN G++ GV +SSS+PKLT D DVISCK +AI
Sbjct: 312 SIFVIGKGLSTVVFDIGNVGNMGGVMVSSSIPKLTSDDDVISCKILAI 359


>ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein
           SKIP4-like [Vitis vinifera]
          Length = 359

 Score =  439 bits (1128), Expect = e-121
 Identities = 207/288 (71%), Positives = 235/288 (81%)
 Frame = -2

Query: 942 ETWIYALCKDKFGQLSCYVLDPNISRNGWKRIQGLPSHSLKRKGMGFEVLGKKIYLMGGC 763
           E WIYALC+DKF ++ CYVLDP  +R  WK I+G P  SLKRKGM FEVLGKK+YL+GGC
Sbjct: 72  EPWIYALCRDKFKRVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKVYLLGGC 131

Query: 762 GWIEDATDEVYCYDAAINTWSEAPPLSTARCYFACEALGDKIYAIGGLGSKSSDPHSWDT 583
           GW+EDATDEVY YDA+ N WSEA PLSTARCYFACE L  KIYAIGGLGSKS+DPHSWDT
Sbjct: 132 GWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSNDPHSWDT 191

Query: 582 YDSLTNCWKSHLDPNIVHDIEDSVVLDGKIYIRCGXXXXXXXXXXXXYDPSNGTWQHADT 403
           Y+  TN WKSH DPNIV DIED++VLD KIYIRCG            Y+PS+GTWQHAD 
Sbjct: 192 YNPHTNSWKSHSDPNIVPDIEDTIVLDEKIYIRCGTSALTSHVYVVVYNPSHGTWQHADA 251

Query: 402 DMVSGWRGPGVVVDGSFYVLDQSSGTRLMLWKMDSREWVAVGRLSALLTRPPCRLVAIGK 223
           DMV GW+GP VVVDG F+VLDQ  GTRLM+W+ +S +WVAVGRLS LLT PPCRLVAIGK
Sbjct: 252 DMVLGWQGPAVVVDGXFFVLDQRLGTRLMMWQKESTKWVAVGRLSPLLTCPPCRLVAIGK 311

Query: 222 SIFVVGKRLSTVVFDVGNAGSLDGVRLSSSLPKLTYDGDVISCKSVAI 79
           SIFV+GK LSTVVFD+GNAG++ GV +SSS+PKLT D DVISCK +AI
Sbjct: 312 SIFVIGKGLSTVVFDIGNAGNMGGVMVSSSIPKLTSDDDVISCKILAI 359


>ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 362

 Score =  370 bits (951), Expect = e-100
 Identities = 179/289 (61%), Positives = 211/289 (73%), Gaps = 1/289 (0%)
 Frame = -2

Query: 942 ETWIYALCKDKFGQLSCYVLDPNISRNGWKRIQGLPSHSLKRKGMGFEVLGKKIYLMGGC 763
           ETWIYALC+DK  ++ CYVLDP  SR  WK + GLP H   RKGMGFE LG K++L+GGC
Sbjct: 75  ETWIYALCRDKSNEIFCYVLDPTTSRRYWKLLDGLPPHISNRKGMGFEALGNKLFLLGGC 134

Query: 762 GWIEDATDEVYCYDAAINTWSEAPPLSTARCYFACEALGDKIYAIGGLGSKSSDPHSWDT 583
               D+TDE Y YDA+ N W EA  LS ARCYFACE L +K+YAIGGL S SSD +SWDT
Sbjct: 135 SGFLDSTDEAYSYDASSNCWVEAASLSNARCYFACEVLDEKLYAIGGLVSNSSD-NSWDT 193

Query: 582 YDSLTNCWKSHLDPNIVHDIEDSVVLDGKIYIRCGXXXXXXXXXXXXY-DPSNGTWQHAD 406
           +D LT CW  H+DPNI  DIEDSVVLDGKIY RC               +PS+GTWQ+AD
Sbjct: 194 FDPLTKCWTFHIDPNIASDIEDSVVLDGKIYTRCARHTDVAPHAFAVVYEPSSGTWQYAD 253

Query: 405 TDMVSGWRGPGVVVDGSFYVLDQSSGTRLMLWKMDSREWVAVGRLSALLTRPPCRLVAIG 226
            DMVSGW GP VVV G+ YVLDQS GTRLM+W  + REW+ VG+LS LLTRPPC+LVA+G
Sbjct: 254 ADMVSGWTGPAVVVYGTLYVLDQSLGTRLMMWHKERREWIPVGKLSPLLTRPPCQLVAVG 313

Query: 225 KSIFVVGKRLSTVVFDVGNAGSLDGVRLSSSLPKLTYDGDVISCKSVAI 79
           KSIF+VGK LSTVV DVG+ G+   V + SS+P L  D +VISCK ++I
Sbjct: 314 KSIFIVGKTLSTVVVDVGDLGNEGQVMMGSSIPGLLSDFNVISCKCLSI 362


>ref|XP_004134327.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis sativus]
           gi|449480385|ref|XP_004155879.1| PREDICTED:
           F-box/kelch-repeat protein SKIP4-like [Cucumis sativus]
          Length = 358

 Score =  357 bits (916), Expect = 2e-96
 Identities = 165/289 (57%), Positives = 215/289 (74%), Gaps = 1/289 (0%)
 Frame = -2

Query: 942 ETWIYALCKDKFGQLSCYVLDPNISRNGWKRIQGLPSHSLKRKGMGFEVLGKKIYLMGGC 763
           ETWIYALC+DK  Q+SCYVLD N S+  WK+++  P+ S KRKGMGFE +G+K+Y++GGC
Sbjct: 72  ETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKNWPTCSFKRKGMGFEAMGRKLYVLGGC 131

Query: 762 GWIEDATDEVYCYDAAINTWSEAPPLSTARCYFACEALGDKIYAIGGLGSKSSDPHSWDT 583
            W EDA+DEVYCYD +IN+W+    LS+ARCYFACE L +K+Y IGG+   S D HSWD 
Sbjct: 132 SWSEDASDEVYCYDTSINSWTPVAQLSSARCYFACEVLNEKLYTIGGICPSSGDLHSWDV 191

Query: 582 YDSLTNCWKSHLD-PNIVHDIEDSVVLDGKIYIRCGXXXXXXXXXXXXYDPSNGTWQHAD 406
           YD  TN W+ +LD  NI ++IEDS+V+DGKIYIR              YDPS+G WQH++
Sbjct: 192 YDPSTNTWEPYLDITNIQNEIEDSIVMDGKIYIR--LRSADSQVYALVYDPSSGMWQHSN 249

Query: 405 TDMVSGWRGPGVVVDGSFYVLDQSSGTRLMLWKMDSREWVAVGRLSALLTRPPCRLVAIG 226
           ++MVSGWRGP V+VD + YVLDQSSGTRLM+W  + + W+ VGR S+LLTRPPC+LV +G
Sbjct: 250 SEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKGWIPVGRFSSLLTRPPCKLVGVG 309

Query: 225 KSIFVVGKRLSTVVFDVGNAGSLDGVRLSSSLPKLTYDGDVISCKSVAI 79
             I VVGK LS+V+FDV N  ++ G+ +SSS+P+L  D DV++CK   I
Sbjct: 310 TKIVVVGKGLSSVIFDVSNVKTMMGLMVSSSIPRLDSDIDVLACKCTTI 358


Top