BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021820
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28135.3| unnamed protein product [Vitis vinifera]              279   2e-73
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...   279   2e-73
gb|ACZ98537.1| PPR motif protein [Malus x domestica]                  264   7e-69
ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...   252   3e-65
ref|XP_003628782.1| Pentatricopeptide repeat-containing protein ...   239   3e-61

>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  279 bits (714), Expect = 2e-73
 Identities = 134/188 (71%), Positives = 161/188 (85%)
 Frame = +2

Query: 8    STKQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGL 187
            S+K+L +YNAMIS YALHG A EALALFKHLQ+EGIEPDSITFTS+LS+CSHAGL+ EGL
Sbjct: 1712 SSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGL 1771

Query: 188  DIFDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEAFQFIVNVTFEPDAPILGSLLAACRE 367
            ++F  M+S++++NP MEHYGCVV+LLSRCGNLDEA + I+ + F+PDA ILGSLL ACRE
Sbjct: 1772 NLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACRE 1831

Query: 368  HNEIELGEYLAEYLTNMEPDNSGNYVALSNAYAVVGRWDEKSQLRYLMKEKGLRKVPGCS 547
            H+EIELGEYL+++L  +EP NSGNYVALSNAYA  GRW E S +R LMK +GLRK PGCS
Sbjct: 1832 HHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCS 1891

Query: 548  WIQIGEEL 571
            WIQ G +L
Sbjct: 1892 WIQTGGKL 1899



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
 Frame = +2

Query: 14   KQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGLDI 193
            + L L+N +++ YA  G + EAL LF  +Q + + P+ I++ SV+      G + E  D+
Sbjct: 1543 RDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDM 1602

Query: 194  FDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEA---FQFIVNVTFEPDAPILGSLLAACR 364
            F  M S     P++  +  +++ L++ G   EA   FQ +      P    + S+L AC 
Sbjct: 1603 FSQMQS-LGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACT 1661

Query: 365  EHNEIELGEYLAEYLTNMEPDNSGNY-VALSNAYAVVGRWDEKSQLRYLMKEKGL 526
            +   +  G  +  ++T  E   S     +L + YA  G  DE  ++ ++M  K L
Sbjct: 1662 DIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKEL 1716


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  279 bits (714), Expect = 2e-73
 Identities = 134/188 (71%), Positives = 161/188 (85%)
 Frame = +2

Query: 8    STKQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGL 187
            S+K+L +YNAMIS YALHG A EALALFKHLQ+EGIEPDSITFTS+LS+CSHAGL+ EGL
Sbjct: 617  SSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGL 676

Query: 188  DIFDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEAFQFIVNVTFEPDAPILGSLLAACRE 367
            ++F  M+S++++NP MEHYGCVV+LLSRCGNLDEA + I+ + F+PDA ILGSLL ACRE
Sbjct: 677  NLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACRE 736

Query: 368  HNEIELGEYLAEYLTNMEPDNSGNYVALSNAYAVVGRWDEKSQLRYLMKEKGLRKVPGCS 547
            H+EIELGEYL+++L  +EP NSGNYVALSNAYA  GRW E S +R LMK +GLRK PGCS
Sbjct: 737  HHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCS 796

Query: 548  WIQIGEEL 571
            WIQ G +L
Sbjct: 797  WIQTGGKL 804



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
 Frame = +2

Query: 14  KQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGLDI 193
           + L L+N +++ YA  G + EAL LF  +Q + + P+ I++ SV+      G + E  D+
Sbjct: 448 RDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDM 507

Query: 194 FDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEA---FQFIVNVTFEPDAPILGSLLAACR 364
           F  M S     P++  +  +++ L++ G   EA   FQ +      P    + S+L AC 
Sbjct: 508 FSQMQS-LGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACT 566

Query: 365 EHNEIELGEYLAEYLTNMEPDNSGNY-VALSNAYAVVGRWDEKSQLRYLMKEKGL 526
           +   +  G  +  ++T  E   S     +L + YA  G  DE  ++ ++M  K L
Sbjct: 567 DIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKEL 621


>gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  264 bits (675), Expect = 7e-69
 Identities = 121/186 (65%), Positives = 158/186 (84%)
 Frame = +2

Query: 14   KQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGLDI 193
            K+L +YNAMISG+ALHG A EALAL++ L++EG++PD+ITFT+ L +CSHA ++ EGL++
Sbjct: 536  KELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLEL 595

Query: 194  FDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEAFQFIVNVTFEPDAPILGSLLAACREHN 373
            F  M+S +++NPS+EHYGC+V+LLSRCG+LDEAF  I  + ++PD  ILGSLLAACREHN
Sbjct: 596  FVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHN 655

Query: 374  EIELGEYLAEYLTNMEPDNSGNYVALSNAYAVVGRWDEKSQLRYLMKEKGLRKVPGCSWI 553
            +IEL EYL+  L  ++PDNSGNYVA+SNAYA  GRWDE  ++R LMKE+GLRK+PGCSWI
Sbjct: 656  KIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWI 715

Query: 554  QIGEEL 571
            Q+GEEL
Sbjct: 716  QVGEEL 721



 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
 Frame = +2

Query: 11  TKQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGLD 190
           TK L L+N M++ +A  G + EAL LF  +Q E + P+ I++ S++    ++G + E  D
Sbjct: 364 TKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKD 423

Query: 191 IFDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEA---FQFIVNVTFEPDAPILGSLLAAC 361
           +F L +    V P++  +  +++ L+R G   EA   FQ +     +P+   +  +L AC
Sbjct: 424 MF-LQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLAC 482

Query: 362 REHNEIELGEYLAEYL 409
                +++G  L  YL
Sbjct: 483 INLASLQIGRALHGYL 498


>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Glycine max]
          Length = 805

 Score =  252 bits (644), Expect = 3e-65
 Identities = 118/188 (62%), Positives = 150/188 (79%)
 Frame = +2

Query: 8    STKQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGL 187
            STK+L +YNAMIS YA HG A+EAL LFK +++EGI PD IT TSVLS+CSH GL+KEG+
Sbjct: 590  STKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGI 649

Query: 188  DIFDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEAFQFIVNVTFEPDAPILGSLLAACRE 367
             +F  M+SE  + PS EHYGC+V LL+  G LDEA + I+ +   PDA ILGSLL AC +
Sbjct: 650  KVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQ 709

Query: 368  HNEIELGEYLAEYLTNMEPDNSGNYVALSNAYAVVGRWDEKSQLRYLMKEKGLRKVPGCS 547
            +N+IEL +Y+A++L  ++PDNSGNYVALSN YA VG+WD+ S LR LMKEKGLRK+PGCS
Sbjct: 710  NNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCS 769

Query: 548  WIQIGEEL 571
            WI++G+EL
Sbjct: 770  WIEVGQEL 777


>ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355522804|gb|AET03258.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  239 bits (609), Expect = 3e-61
 Identities = 113/188 (60%), Positives = 146/188 (77%)
 Frame = +2

Query: 8    STKQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGL 187
            STK+L +YNAMIS YA HG + EALALF+ L ++GI PD ITFTSVLS+CSH  LLKEGL
Sbjct: 650  STKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGL 709

Query: 188  DIFDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEAFQFIVNVTFEPDAPILGSLLAACRE 367
            ++F  M+ E  + PS +HYGC+V LL+  G LDEA + I+ +   PDA ILGSLLAAC +
Sbjct: 710  ELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQ 769

Query: 368  HNEIELGEYLAEYLTNMEPDNSGNYVALSNAYAVVGRWDEKSQLRYLMKEKGLRKVPGCS 547
            ++E EL  Y+A++L  +EP+N GNYVALSN YA +G+WDE S +R  MKEKGL+K+PGCS
Sbjct: 770  NHETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCS 829

Query: 548  WIQIGEEL 571
            WI++G+EL
Sbjct: 830  WIEVGQEL 837



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 36/122 (29%), Positives = 71/122 (58%)
 Frame = +2

Query: 11  TKQLALYNAMISGYALHGCAKEALALFKHLQQEGIEPDSITFTSVLSSCSHAGLLKEGLD 190
           T  L  +  MISG A +G   EA  +F+ +Q  G+ P+SI+ TS LS+C++  LL  G  
Sbjct: 550 TPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRS 609

Query: 191 IFDLMISEYHVNPSMEHYGCVVNLLSRCGNLDEAFQFIVNVTFEPDAPILGSLLAACREH 370
           I   ++  + ++ S++    ++++ ++CGNLD+A +F+  +    + P+  ++++A   H
Sbjct: 610 IHGYVMRNF-MSFSLQITTSIIDMYAKCGNLDDA-KFVFIICSTKELPVYNAMISAYASH 667

Query: 371 NE 376
            +
Sbjct: 668 GK 669