BLASTX nr result

ID: Panax21_contig00021815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021815
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281291.2| PREDICTED: two-component response regulator ...   365   1e-98
emb|CBI26824.3| unnamed protein product [Vitis vinifera]              365   1e-98
ref|XP_002533196.1| two-component sensor histidine kinase bacter...   354   2e-95
ref|XP_002315852.1| type-b response regulator [Populus trichocar...   352   8e-95
emb|CBM42561.1| putative B-type response regulator 16 [Populus x...   349   5e-94

>ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
           vinifera]
          Length = 643

 Score =  365 bits (936), Expect = 1e-98
 Identities = 182/239 (76%), Positives = 200/239 (83%)
 Frame = -3

Query: 718 MATLQRLPHSTSCSTASSYGTNSGKPETFPAGLRVLVVDDDITCLSILEQMLRRCSYLAT 539
           MA L ++P  +S  T  S   +    + FPAGLRVLVVDDD+TCL ILEQMLRRC Y  T
Sbjct: 1   MAALLKVPPQSSGGTNGSCKADVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVT 60

Query: 538 TCSQATVALNLLRERKGCFDLVLSDVHMPDMDGFKLLELIGLEMDLPVIMMSADGRTSAV 359
           TCSQAT+ALN+LRE+KGCFD+VLSDVHMPDMDG+KLLE +GLEMDLPVIMMSADGRTSAV
Sbjct: 61  TCSQATIALNILREKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAV 120

Query: 358 MRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNETKEHENSVSLDDNDRHKRGSDDAEY 179
           MRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNE KEHE+S SL+DNDRHKRG +DAEY
Sbjct: 121 MRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEY 180

Query: 178 ASSINEGSEGILKTQKKRRXXXXXXXXXXXXXDPTASKKPRVVWSVELHQQFVSAVNQL 2
           ASS+NEG+EGILK QKKRR             DP+ SKKPRVVWSVELHQQFVSAVNQL
Sbjct: 181 ASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQL 239


>emb|CBI26824.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  365 bits (936), Expect = 1e-98
 Identities = 182/239 (76%), Positives = 200/239 (83%)
 Frame = -3

Query: 718 MATLQRLPHSTSCSTASSYGTNSGKPETFPAGLRVLVVDDDITCLSILEQMLRRCSYLAT 539
           MA L ++P  +S  T  S   +    + FPAGLRVLVVDDD+TCL ILEQMLRRC Y  T
Sbjct: 1   MAALLKVPPQSSGGTNGSCKADVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVT 60

Query: 538 TCSQATVALNLLRERKGCFDLVLSDVHMPDMDGFKLLELIGLEMDLPVIMMSADGRTSAV 359
           TCSQAT+ALN+LRE+KGCFD+VLSDVHMPDMDG+KLLE +GLEMDLPVIMMSADGRTSAV
Sbjct: 61  TCSQATIALNILREKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAV 120

Query: 358 MRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNETKEHENSVSLDDNDRHKRGSDDAEY 179
           MRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNE KEHE+S SL+DNDRHKRG +DAEY
Sbjct: 121 MRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEY 180

Query: 178 ASSINEGSEGILKTQKKRRXXXXXXXXXXXXXDPTASKKPRVVWSVELHQQFVSAVNQL 2
           ASS+NEG+EGILK QKKRR             DP+ SKKPRVVWSVELHQQFVSAVNQL
Sbjct: 181 ASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQL 239


>ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
           communis] gi|223526994|gb|EEF29188.1| two-component
           sensor histidine kinase bacteria, putative [Ricinus
           communis]
          Length = 669

 Score =  354 bits (908), Expect = 2e-95
 Identities = 184/250 (73%), Positives = 201/250 (80%), Gaps = 11/250 (4%)
 Frame = -3

Query: 718 MATLQRLPHSTSCSTASSYGTNSGK-----------PETFPAGLRVLVVDDDITCLSILE 572
           MA LQR+  S S +TAS+Y +  G             + FPAGLRVLVVDDD TCL ILE
Sbjct: 1   MAALQRVASSVS-ATASNYSSCKGNGVVTATADVAVSDQFPAGLRVLVVDDDTTCLRILE 59

Query: 571 QMLRRCSYLATTCSQATVALNLLRERKGCFDLVLSDVHMPDMDGFKLLELIGLEMDLPVI 392
           QMLRRC Y  TTCSQA VALNLLRERKGCFD+VLSDVHMPDMDGFKLLE +GLEMDLPVI
Sbjct: 60  QMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDVHMPDMDGFKLLEHVGLEMDLPVI 119

Query: 391 MMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNETKEHENSVSLDDND 212
           MMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKW+E KE E+S SL+DND
Sbjct: 120 MMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWHENKEIEHSGSLEDND 179

Query: 211 RHKRGSDDAEYASSINEGSEGILKTQKKRRXXXXXXXXXXXXXDPTASKKPRVVWSVELH 32
           RHKRG++DAEY SS+NEG+EG+LK QK+R              DP+ SKKPRVVWSVELH
Sbjct: 180 RHKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSKDEDDGEPDSDDPSTSKKPRVVWSVELH 239

Query: 31  QQFVSAVNQL 2
           QQFVSAVNQL
Sbjct: 240 QQFVSAVNQL 249


>ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
           gi|222864892|gb|EEF02023.1| type-b response regulator
           [Populus trichocarpa]
          Length = 663

 Score =  352 bits (903), Expect = 8e-95
 Identities = 183/245 (74%), Positives = 199/245 (81%), Gaps = 6/245 (2%)
 Frame = -3

Query: 718 MATLQRLPHSTSCSTASSYGTNSGK------PETFPAGLRVLVVDDDITCLSILEQMLRR 557
           MA LQR+  S S S ASSYG+  G        + FPAGLRVLVVDDDITCL +LE+ML R
Sbjct: 1   MAALQRVASSLSTS-ASSYGSCKGAGADLMFSDQFPAGLRVLVVDDDITCLRLLEKMLCR 59

Query: 556 CSYLATTCSQATVALNLLRERKGCFDLVLSDVHMPDMDGFKLLELIGLEMDLPVIMMSAD 377
           C Y  TTCSQAT AL LLRERKGCFD+VLSDVHMPDMDGFKLLEL+GLEMDLPVIMMSAD
Sbjct: 60  CLYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSAD 119

Query: 376 GRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNETKEHENSVSLDDNDRHKRG 197
           GRTSAVMRGIRHGACDYLIKPIREEELKNIWQHV+RKKWNE KE E+S S +DND +KRG
Sbjct: 120 GRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDWYKRG 179

Query: 196 SDDAEYASSINEGSEGILKTQKKRRXXXXXXXXXXXXXDPTASKKPRVVWSVELHQQFVS 17
           +DD E ASS+NEG+EG+LK QKKR              DP+ASKKPRVVWSVELHQQFVS
Sbjct: 180 NDDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEIDDPSASKKPRVVWSVELHQQFVS 239

Query: 16  AVNQL 2
           AVNQL
Sbjct: 240 AVNQL 244


>emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
          Length = 663

 Score =  349 bits (896), Expect = 5e-94
 Identities = 181/245 (73%), Positives = 198/245 (80%), Gaps = 6/245 (2%)
 Frame = -3

Query: 718 MATLQRLPHSTSCSTASSYGTNSGK------PETFPAGLRVLVVDDDITCLSILEQMLRR 557
           MA LQR+  S S S  SSYG+  G        + FPAGLRVLVVDDDITCL +LE+ML R
Sbjct: 1   MAALQRVASSLSTS-GSSYGSCKGAGADLMFSDQFPAGLRVLVVDDDITCLRLLEKMLCR 59

Query: 556 CSYLATTCSQATVALNLLRERKGCFDLVLSDVHMPDMDGFKLLELIGLEMDLPVIMMSAD 377
           C Y  TTCSQAT AL LLRERKGCFD+VLSDVHMPDMDGFKLLEL+GLEMDLPVIMMSAD
Sbjct: 60  CLYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSAD 119

Query: 376 GRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNETKEHENSVSLDDNDRHKRG 197
           GRTSAVMRGI+HGACDYLIKPIREEELKNIWQHV+RKKWNE KE E+S S +DND +KRG
Sbjct: 120 GRTSAVMRGIKHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDWYKRG 179

Query: 196 SDDAEYASSINEGSEGILKTQKKRRXXXXXXXXXXXXXDPTASKKPRVVWSVELHQQFVS 17
           +DD E ASS+NEG+EG+LK QKKR              DP+ASKKPRVVWSVELHQQFVS
Sbjct: 180 NDDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEIDDPSASKKPRVVWSVELHQQFVS 239

Query: 16  AVNQL 2
           AVNQL
Sbjct: 240 AVNQL 244


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