BLASTX nr result

ID: Panax21_contig00021804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021804
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16596.3| unnamed protein product [Vitis vinifera]              544   e-152
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   536   e-150
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              507   e-141
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...   506   e-141
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...   489   e-136

>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
          Length = 2452

 Score =  544 bits (1402), Expect = e-152
 Identities = 286/405 (70%), Positives = 317/405 (78%), Gaps = 3/405 (0%)
 Frame = -1

Query: 1206 RKPADSKMFGFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIECALTRISSG 1027
            RKP D+KMF FGTKALEQF DRL+EWPQYCNHILQISHLR TH +LVAF+E  L R+SSG
Sbjct: 791  RKPPDAKMFVFGTKALEQFADRLVEWPQYCNHILQISHLRNTHPDLVAFVEQTLARVSSG 850

Query: 1026 TPELDVGHVTAADQPHGS--IPAAHVEMPGSSFPLTSAQEA-PQVPSPVQLQHRQQSSIE 856
              E D G+  + DQ HGS  + + ++EM  SS     A    P  PS + LQHR QSS++
Sbjct: 851  HLESDGGN-NSDDQHHGSTQLTSVNMEMSASSLQSLGASSIQPGQPSSLPLQHRLQSSLD 909

Query: 855  ERIKASVPLPNYMKPVLFSAGRPSALPXXXXXXXXXXXXXXXXXXXXXXSPGFVRPSRTA 676
            +R KASV L N  KP++  AG P                          SPG +RP R  
Sbjct: 910  DRHKASVTLSNSTKPLVAPAGEPLVASSGDATSIDKSLNSINAPATVSSSPGSIRPLRGI 969

Query: 675  TSARFGSALNIETLVAAAERKETPLEAPASEIQDKISFIINNLSMANVDAKAKEFSELLK 496
            TS RFGSA+NIETLVAA+ER+ETP+EAPA EIQDKISFIINN+S ANV+AKAKEF+E+ K
Sbjct: 970  TSTRFGSAMNIETLVAASERRETPIEAPALEIQDKISFIINNISAANVEAKAKEFTEIFK 1029

Query: 495  EQLYPWFAQYMVMKRASIEPNFHDLYLKFLNKVNSKPLNKEITQATYENCKVLLECELIK 316
            EQ YPWFAQYMVMKRASIEPNFHDLYLKFL+KVNSK LNKEI QATYENC+VLL  ELIK
Sbjct: 1030 EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCRVLLGSELIK 1089

Query: 315  SSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEP 136
            SSSEERSLLKNLGSWLGK TIGRNQVL+AREIDPKSLIIEAYEKGLMIAVIPFTSKILEP
Sbjct: 1090 SSSEERSLLKNLGSWLGKFTIGRNQVLKAREIDPKSLIIEAYEKGLMIAVIPFTSKILEP 1149

Query: 135  CHKSLAYQPPNPWTMGILGLLTEIYALPNLKMNLKFDIEVLFKHL 1
            C  S+AYQPPNPWTMGILGLL EIY LPNLKMNLKFDIEVLFK+L
Sbjct: 1150 CRNSIAYQPPNPWTMGILGLLAEIYVLPNLKMNLKFDIEVLFKNL 1194


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  536 bits (1380), Expect = e-150
 Identities = 287/413 (69%), Positives = 322/413 (77%), Gaps = 11/413 (2%)
 Frame = -1

Query: 1206 RKPADSKMFGFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIECALTRISSG 1027
            RKPADSKMF FG+ ALEQFVDRLIEWPQYCNHILQISHLR THSE+VAFIE AL RISSG
Sbjct: 769  RKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSG 828

Query: 1026 TPELDVGHVTAADQPHGSIPAA--HVEMPG--SSFPLTSAQEAPQVPSP------VQLQH 877
              ++D     +    H S  A+  HVE+    S  P+        V  P      +QLQ 
Sbjct: 829  HSDVDGASHASVISNHHSAQASLGHVEVVNDYSVGPIAVQLSGSSVIQPGQQHLSMQLQQ 888

Query: 876  RQQSSIEERIKASVPLPNYMKPVLFSAGRPSAL-PXXXXXXXXXXXXXXXXXXXXXXSPG 700
            R+++ +++R+KASV     +KP+L S G+ S L P                      SPG
Sbjct: 889  RRENPLDDRLKASVGSSTDVKPLLSSLGQSSVLTPTDASSTNKLHSTVSTSSMLSSSSPG 948

Query: 699  FVRPSRTATSARFGSALNIETLVAAAERKETPLEAPASEIQDKISFIINNLSMANVDAKA 520
            FVRPSR  TSARFGSALNIETLVAAAE++E P+EAP SE+QDKI FIINN+S AN++AKA
Sbjct: 949  FVRPSRGTTSARFGSALNIETLVAAAEKREIPIEAPGSEVQDKILFIINNVSAANIEAKA 1008

Query: 519  KEFSELLKEQLYPWFAQYMVMKRASIEPNFHDLYLKFLNKVNSKPLNKEITQATYENCKV 340
            KEF+E+LKEQ YPWFAQYMVMKRASIEPNFHDLYLKFL+KVNSK LNKEI QATYENCKV
Sbjct: 1009 KEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKV 1068

Query: 339  LLECELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIP 160
            LL  ELIKSSSEERSLLKNLGSWLGK+TIGRNQVLRAREIDPKSLI+EAYEKGLMIAVIP
Sbjct: 1069 LLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGLMIAVIP 1128

Query: 159  FTSKILEPCHKSLAYQPPNPWTMGILGLLTEIYALPNLKMNLKFDIEVLFKHL 1
            FTSK+LEPC  SLAYQPPNPWTMGILGLL EIY++PNLKMNLKFDIEVLFK+L
Sbjct: 1129 FTSKVLEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNL 1181


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  507 bits (1306), Expect = e-141
 Identities = 277/423 (65%), Positives = 309/423 (73%), Gaps = 21/423 (4%)
 Frame = -1

Query: 1206 RKPADSKMFGFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIECALTRISSG 1027
            RKP DSK+F FGTKALEQF+DRLIEWPQYC HILQISHLRGTH ELVAFIE AL R SS 
Sbjct: 770  RKPTDSKIFTFGTKALEQFLDRLIEWPQYCYHILQISHLRGTHPELVAFIERALARTSSS 829

Query: 1026 TPELDVGHVTAADQPHGSIPAA--HVEMPGSSFPLTSA---QEAPQVPSPVQLQHRQQSS 862
              E + G+ ++ D   GS PA   +VE+P SS+ L  +   Q   Q  SP+  Q R Q  
Sbjct: 830  HSESNGGNNSSTDPHSGSAPATLENVEVPDSSWQLLGSRTTQPGQQTSSPLPAQQRHQGF 889

Query: 861  IEERIKASVPLPNYMKPVLFSAGRPS------ALPXXXXXXXXXXXXXXXXXXXXXXSPG 700
            + +R K S  L NY +P+L   G  S      AL                       S G
Sbjct: 890  LGDRHKTSASLINYGRPILPPTGHASNVSTSDALGSQKSLQTVSSQTATGVSAAVSSSTG 949

Query: 699  FVRPSRTATSAR----------FGSALNIETLVAAAERKETPLEAPASEIQDKISFIINN 550
             + PSR   S            FGSALNIETLVAAAER++T +EAP SEIQDKISF+INN
Sbjct: 950  LLHPSRXIASTSMLRQPSYNTGFGSALNIETLVAAAERRDTHIEAPTSEIQDKISFLINN 1009

Query: 549  LSMANVDAKAKEFSELLKEQLYPWFAQYMVMKRASIEPNFHDLYLKFLNKVNSKPLNKEI 370
            ++ AN++AKAKEF+E+L EQ YPWFA+YMVMKRASIEPNFHD YLKFL+KVNSK LNKEI
Sbjct: 1010 IASANIEAKAKEFTEVLDEQYYPWFARYMVMKRASIEPNFHDSYLKFLDKVNSKTLNKEI 1069

Query: 369  TQATYENCKVLLECELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIIEAY 190
             +A YENCKVLL  ELIKSSSEERSLLKNLGSWLGK TIGRNQVLRAREIDPKSLIIEAY
Sbjct: 1070 VKAAYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVLRAREIDPKSLIIEAY 1129

Query: 189  EKGLMIAVIPFTSKILEPCHKSLAYQPPNPWTMGILGLLTEIYALPNLKMNLKFDIEVLF 10
            EKGLMIAV+PFTSKILEPC  SLAY+PPNPWTM ILGLL EIYALPNLKMNLKFDIEVLF
Sbjct: 1130 EKGLMIAVVPFTSKILEPCQSSLAYRPPNPWTMAILGLLVEIYALPNLKMNLKFDIEVLF 1189

Query: 9    KHL 1
            K+L
Sbjct: 1190 KNL 1192


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score =  506 bits (1302), Expect = e-141
 Identities = 279/437 (63%), Positives = 318/437 (72%), Gaps = 35/437 (8%)
 Frame = -1

Query: 1206 RKPADSKMFGFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIECALTRISSG 1027
            RKPADSKMF FGTKALEQFVDRLIEWPQYCNHILQISHLR TH ELVAFIE AL RIS+G
Sbjct: 765  RKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHVELVAFIEQALLRISAG 824

Query: 1026 TPELDVGHVTAADQPHGSIPAAHVEMPGSSFPLTSAQEAPQVPSPVQLQHRQQSSIEERI 847
              + DV              A +VE+ GS     + Q   Q+ S ++LQ + +S+I++R+
Sbjct: 825  HSDSDVS-------------AGNVELNGSG----NIQPGQQLSSAMELQQKYESAIDDRL 867

Query: 846  KASVPLPNYMKPVLFSAGRPSALPXXXXXXXXXXXXXXXXXXXXXXSPGFVRPSRTATSA 667
            K + P  + +KP +   G+ S  P                       PGFVRPSR A S 
Sbjct: 868  KFTTPSVD-VKPNVPPMGQTSIQPTGDASANQKNTTNTPAALAPS--PGFVRPSRGAAST 924

Query: 666  RFGSALNIETLVAAAERKETPLEAPASEIQDKISFIINNLSMANVDAKAKEFSELLKEQL 487
            RFGSALNIETLVAAAE++ETP+EAP S++QDKISF+INN+S+AN++AKAKEF+E+LKEQ 
Sbjct: 925  RFGSALNIETLVAAAEKRETPIEAPGSDVQDKISFMINNISLANLEAKAKEFTEILKEQF 984

Query: 486  YPWFAQYMVMKR-----------------------ASIEPNFHDLYLKFLNKVNSKPLNK 376
            YPWFAQYMVMKR                       ASIEPNFHDLYLKFL++VNSK L+K
Sbjct: 985  YPWFAQYMVMKRKICLEKILVNTQVINXHPTSYYRASIEPNFHDLYLKFLDRVNSKALSK 1044

Query: 375  EITQATYENCKV------------LLECELIKSSSEERSLLKNLGSWLGKITIGRNQVLR 232
            EI QATYENCKV            LL  +LIKSSSEERSLLKNLGSWLGK+TIGRNQVLR
Sbjct: 1045 EIVQATYENCKVFVSSWIMCSLQVLLGSDLIKSSSEERSLLKNLGSWLGKLTIGRNQVLR 1104

Query: 231  AREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCHKSLAYQPPNPWTMGILGLLTEIYALP 52
            AREIDPKSLIIEAYEKGLMIAVIPFTSKILEPC  SLAYQPPNPWTMGILGLL EIY++P
Sbjct: 1105 AREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMP 1164

Query: 51   NLKMNLKFDIEVLFKHL 1
            NLKMNLKFDIEVLFK+L
Sbjct: 1165 NLKMNLKFDIEVLFKNL 1181


>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score =  489 bits (1258), Expect = e-136
 Identities = 271/431 (62%), Positives = 306/431 (70%), Gaps = 29/431 (6%)
 Frame = -1

Query: 1206 RKPADSKMFGFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSELVAFIECALTRISSG 1027
            RKPADSKMF FG+ ALEQFVDRL+EWPQYCNHILQISHLR THSE+V  IE AL RISSG
Sbjct: 766  RKPADSKMFMFGSLALEQFVDRLVEWPQYCNHILQISHLRSTHSEIVTLIEQALARISSG 825

Query: 1026 TPELDVGHVTAADQPHGSIPAAHVEMPGSSFPLTSAQEAPQVPSPVQLQHRQQSSIEERI 847
              ++D    T+    H S    HVE+ GS                 Q   R+++ +++R 
Sbjct: 826  HTDVDGMSHTSVISNHSST-FGHVEISGSGI--------------TQPGQRRENHLDDRQ 870

Query: 846  KASVPLPNYMKPVLFSAGRPSALPXXXXXXXXXXXXXXXXXXXXXXSPGFVRPS----RT 679
            K SV     MKP L S G+   +                        PGFVRPS    R 
Sbjct: 871  KTSVGSSTDMKPPLASIGQSPVITPTDAPSANKPQPMLSSSS-----PGFVRPSPSPSRG 925

Query: 678  ATSARFGSALNIETLVAAAERKETPLEAPASEIQDKISFIINNLSMANVDAKAKEFSELL 499
            + SA+FGSALNIETLVAAAE++ETP+EAP SE+QDKISFIINN+S  N++AK+KE +E+L
Sbjct: 926  SASAKFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISSTNIEAKSKELTEIL 985

Query: 498  KEQLYPWFAQYMVMKR------------ASIEPNFHDLYLKFLNKVNSKPLNKEITQATY 355
            KEQ YPWFAQYMVMKR            ASIEPNFHD+YLKFL+KVNSK LNKEI QATY
Sbjct: 986  KEQYYPWFAQYMVMKRYLHLYKLILFGRASIEPNFHDMYLKFLDKVNSKALNKEIVQATY 1045

Query: 354  ENCK-------------VLLECELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDP 214
            ENCK             VLL  ELIKSSSEERSLLKNLGSWLGK+TIGRNQVLRAREIDP
Sbjct: 1046 ENCKMCEKFEIIQCTLQVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDP 1105

Query: 213  KSLIIEAYEKGLMIAVIPFTSKILEPCHKSLAYQPPNPWTMGILGLLTEIYALPNLKMNL 34
            KSLIIEAYEKGLMIAVIPFTSK+LEPC  SLAYQPPNPWTMGILGLL EI ++PNLKMNL
Sbjct: 1106 KSLIIEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEICSMPNLKMNL 1165

Query: 33   KFDIEVLFKHL 1
            KFDIEVL+K+L
Sbjct: 1166 KFDIEVLYKNL 1176


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