BLASTX nr result

ID: Panax21_contig00021802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021802
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prun...   138   5e-31
ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicu...   136   2e-30
ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cuc...   132   3e-29
ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isof...   131   6e-29
ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isof...   131   6e-29

>gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
          Length = 954

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/77 (83%), Positives = 71/77 (92%)
 Frame = +1

Query: 1    EGLLNDSRGSGWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMQLL 180
            EGLLND RGSGWKLVYVD+ENDVLLVGDDPWEEFVGCVRCIRILSP+EVQQM EEG++LL
Sbjct: 877  EGLLNDPRGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGIKLL 936

Query: 181  NSTAAPAIHGSVSEGGR 231
            NS A   I+G++SEGGR
Sbjct: 937  NSAAMQGINGTMSEGGR 953


>ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
            gi|300253180|gb|ADJ96592.1| auxin response factor 5
            [Solanum lycopersicum] gi|310697420|gb|ADP06665.1| auxin
            response factor 5 [Solanum lycopersicum]
          Length = 930

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/74 (86%), Positives = 68/74 (91%)
 Frame = +1

Query: 1    EGLLNDSRGSGWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMQLL 180
            EGLLND+RGS WKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSP+EVQQMGEEGMQLL
Sbjct: 854  EGLLNDTRGSSWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMGEEGMQLL 913

Query: 181  NSTAAPAIHGSVSE 222
            NS    +I+GS SE
Sbjct: 914  NSAGLQSINGSTSE 927


>ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
            gi|449476870|ref|XP_004154860.1| PREDICTED: auxin
            response factor 5-like [Cucumis sativus]
          Length = 949

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +1

Query: 1    EGLLNDSRGSGWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMQLL 180
            EGLLND RGSGWKLVYVD+ENDVLL+GDDPWEEFV CVRCIRILSPSEVQQM EEGM+LL
Sbjct: 872  EGLLNDPRGSGWKLVYVDYENDVLLIGDDPWEEFVSCVRCIRILSPSEVQQMSEEGMKLL 931

Query: 181  NSTAAPAIHGSVSEGGRA 234
            NS     I+  +SEGGR+
Sbjct: 932  NSAMMQGINCPMSEGGRS 949


>ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score =  131 bits (329), Expect = 6e-29
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = +1

Query: 1    EGLLNDSRGSGWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMQLL 180
            EGLLND +GSGWKLVYVD+ENDVLLVGDDPW+EFVGCVRCIRILSPSEVQQM EEGMQLL
Sbjct: 874  EGLLNDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQLL 933

Query: 181  NSTAAPAIHGSV 216
            NSTA   I+ S+
Sbjct: 934  NSTAIEGINDSI 945


>ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
          Length = 925

 Score =  131 bits (329), Expect = 6e-29
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = +1

Query: 1    EGLLNDSRGSGWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMQLL 180
            EGLLND +GSGWKLVYVD+ENDVLLVGDDPW+EFVGCVRCIRILSPSEVQQM EEGMQLL
Sbjct: 852  EGLLNDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQLL 911

Query: 181  NSTAAPAIHGSV 216
            NSTA   I+ S+
Sbjct: 912  NSTAIEGINDSI 923


Top