BLASTX nr result

ID: Panax21_contig00021797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021797
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...    74   3e-11
emb|CBI27082.3| unnamed protein product [Vitis vinifera]               74   3e-11
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]    74   3e-11
ref|XP_003520054.1| PREDICTED: putative nuclear matrix constitue...    71   2e-10

>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 42/72 (58%), Positives = 46/72 (63%)
 Frame = -1

Query: 665  DSSHAEKAAGTTLRKRQCAQTSRVRGSEVVAXXXXXXXXXXXXXXRKKRRQTVFPSVQTP 486
            ++SHAEKAA T  RKRQ A +SR+  SE  A              R KRRQTV P VQTP
Sbjct: 993  ETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQTVAPVVQTP 1052

Query: 485  GEKRYNLRRHKT 450
            GEKRYNLRRHKT
Sbjct: 1053 GEKRYNLRRHKT 1064


>emb|CBI27082.3| unnamed protein product [Vitis vinifera]
          Length = 1122

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 42/72 (58%), Positives = 46/72 (63%)
 Frame = -1

Query: 665  DSSHAEKAAGTTLRKRQCAQTSRVRGSEVVAXXXXXXXXXXXXXXRKKRRQTVFPSVQTP 486
            ++SHAEKAA T  RKRQ A +SR+  SE  A              R KRRQTV P VQTP
Sbjct: 902  ETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQTVAPVVQTP 961

Query: 485  GEKRYNLRRHKT 450
            GEKRYNLRRHKT
Sbjct: 962  GEKRYNLRRHKT 973


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 42/72 (58%), Positives = 46/72 (63%)
 Frame = -1

Query: 665  DSSHAEKAAGTTLRKRQCAQTSRVRGSEVVAXXXXXXXXXXXXXXRKKRRQTVFPSVQTP 486
            ++SHAEKAA T  RKRQ A +SR+  SE  A              R KRRQTV P VQTP
Sbjct: 1014 ETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQTVAPVVQTP 1073

Query: 485  GEKRYNLRRHKT 450
            GEKRYNLRRHKT
Sbjct: 1074 GEKRYNLRRHKT 1085


>ref|XP_003520054.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Glycine max]
          Length = 1210

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 40/71 (56%), Positives = 43/71 (60%)
 Frame = -1

Query: 665  DSSHAEKAAGTTLRKRQCAQTSRVRGSEVVAXXXXXXXXXXXXXXRKKRRQTVFPSVQTP 486
            DSSH EKA G T RKRQ AQTSR+  SE  A              R+K+RQTV P  Q  
Sbjct: 998  DSSHTEKAIGNTRRKRQRAQTSRITESEQNAGDSEGQSDSITAGGRRKKRQTVAPLTQVT 1057

Query: 485  GEKRYNLRRHK 453
            GEKRYNLRRHK
Sbjct: 1058 GEKRYNLRRHK 1068


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