BLASTX nr result
ID: Panax21_contig00021796
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00021796 (502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containin... 101 7e-20 ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [... 94 1e-17 ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 89 4e-16 ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 87 1e-15 emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] 84 9e-15 >ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis sativus] gi|449515163|ref|XP_004164619.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis sativus] Length = 430 Score = 101 bits (251), Expect = 7e-20 Identities = 42/61 (68%), Positives = 49/61 (80%) Frame = -3 Query: 185 RVQTSEKQDGGGTADSIPYPDRPGEPDCIYYMRTGTCSYGHNCRFNHPSNIGQIGQYGGE 6 R++ S+ QDGG A+S PYPDRPGEPDC+YYMRTG+CSYG NCRFNHP +GQ Y GE Sbjct: 25 RLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVGQGALYNGE 84 Query: 5 L 3 L Sbjct: 85 L 85 >ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355518206|gb|AES99829.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 422 Score = 93.6 bits (231), Expect = 1e-17 Identities = 38/70 (54%), Positives = 51/70 (72%) Frame = -3 Query: 212 DLTRGIRRLRVQTSEKQDGGGTADSIPYPDRPGEPDCIYYMRTGTCSYGHNCRFNHPSNI 33 ++ IRRL++ ++ +D S+PYPDRPGEPDC+YY+RTG C YG NCR+NHP+NI Sbjct: 19 NIEEAIRRLKINSTRDRDA--VPQSMPYPDRPGEPDCVYYLRTGMCGYGSNCRYNHPANI 76 Query: 32 GQIGQYGGEL 3 + QYG EL Sbjct: 77 SPVTQYGEEL 86 Score = 57.8 bits (138), Expect = 9e-07 Identities = 22/38 (57%), Positives = 28/38 (73%) Frame = -3 Query: 155 GGTADSIPYPDRPGEPDCIYYMRTGTCSYGHNCRFNHP 42 GG A + PDRP +PDC Y+M TGTC YG +C+F+HP Sbjct: 262 GGQAMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHP 299 >ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis vinifera] gi|297739220|emb|CBI28871.3| unnamed protein product [Vitis vinifera] Length = 450 Score = 89.0 bits (219), Expect = 4e-16 Identities = 38/62 (61%), Positives = 44/62 (70%) Frame = -3 Query: 188 LRVQTSEKQDGGGTADSIPYPDRPGEPDCIYYMRTGTCSYGHNCRFNHPSNIGQIGQYGG 9 LR++ + Q+ G S PYPDRPGEPDCIYY+RTG C YG NCRFNHP+ Q QY G Sbjct: 25 LRLKIHDNQEEGSVGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRG 84 Query: 8 EL 3 EL Sbjct: 85 EL 86 >ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis] gi|223531614|gb|EEF33442.1| zinc finger protein, putative [Ricinus communis] Length = 456 Score = 87.0 bits (214), Expect = 1e-15 Identities = 36/61 (59%), Positives = 44/61 (72%) Frame = -3 Query: 185 RVQTSEKQDGGGTADSIPYPDRPGEPDCIYYMRTGTCSYGHNCRFNHPSNIGQIGQYGGE 6 R++ + Q+ GG A S PYPDRPGEPDC+YY+RTG C YG+NCRFNHP Q Q+ E Sbjct: 33 RLKIHDNQEQGGMAPSSPYPDRPGEPDCVYYLRTGLCGYGNNCRFNHPPYAAQGNQFKEE 92 Query: 5 L 3 L Sbjct: 93 L 93 >emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] Length = 460 Score = 84.3 bits (207), Expect = 9e-15 Identities = 38/63 (60%), Positives = 45/63 (71%) Frame = -3 Query: 191 RLRVQTSEKQDGGGTADSIPYPDRPGEPDCIYYMRTGTCSYGHNCRFNHPSNIGQIGQYG 12 R+R + + K++G S PYPDRPGEPDCIYY+RTG C YG NCRFNHP+ Q QY Sbjct: 4 RIRRRKTWKEEGS-VGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYR 62 Query: 11 GEL 3 GEL Sbjct: 63 GEL 65