BLASTX nr result
ID: Panax21_contig00021774
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00021774 (580 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi... 236 2e-60 ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi... 234 6e-60 ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|2... 230 1e-58 ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containi... 225 5e-57 ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containi... 224 6e-57 >ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like [Vitis vinifera] Length = 603 Score = 236 bits (602), Expect = 2e-60 Identities = 118/192 (61%), Positives = 147/192 (76%), Gaps = 1/192 (0%) Frame = -3 Query: 575 EDFEKFHVFPNTSTCCRLISSCIRARKFKLVNKWLDILKADEEIVVLAFETAMKGYNKLH 396 EDF+ F + CCRLISSCIRARKF++ L++ ++++ +L F +AM GYNKLH Sbjct: 141 EDFKSFDAQLDGDICCRLISSCIRARKFRITESLLEVFSYNDDVALLVFNSAMGGYNKLH 200 Query: 395 MYSTTIVMYENMKSAGIVLDPGCYCQIMVAYLKTGQNEKIVSLFEEFE-RRIDWTPFLPQ 219 M+S+TI +Y+ MKSAG+V + Y +IM AY+K EK+V+LF+EFE R+ID +PF Q Sbjct: 201 MFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQ 260 Query: 218 IYRILCESLGKSGRAFEALEFFRDMTKKGFPEDPSFYSLLICSFANIREVKVAEELMREA 39 IYRILCESLGK GRAFEALEFFRDMTKKG ED + YS LICSFA+IREVKVAEEL REA Sbjct: 261 IYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREA 320 Query: 38 ESKKMLRDPAAY 3 E KK+LRDP + Sbjct: 321 EEKKILRDPEVF 332 >ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like [Vitis vinifera] Length = 609 Score = 234 bits (598), Expect = 6e-60 Identities = 118/192 (61%), Positives = 147/192 (76%), Gaps = 1/192 (0%) Frame = -3 Query: 575 EDFEKFHVFPNTSTCCRLISSCIRARKFKLVNKWLDILKADEEIVVLAFETAMKGYNKLH 396 EDF+ F V + CCRLISSCIRARKF++ L++ ++++ +L +AM GYNKLH Sbjct: 142 EDFKSFDVQLDGDICCRLISSCIRARKFRITESLLEVFSYNDDVALLVCNSAMGGYNKLH 201 Query: 395 MYSTTIVMYENMKSAGIVLDPGCYCQIMVAYLKTGQNEKIVSLFEEFE-RRIDWTPFLPQ 219 M+S+TI +Y+ MKSAG+V + Y +IM AY+K EK+V+LF+EFE R+ID +PF Q Sbjct: 202 MFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQ 261 Query: 218 IYRILCESLGKSGRAFEALEFFRDMTKKGFPEDPSFYSLLICSFANIREVKVAEELMREA 39 IYRILCESLGK GRAFEALEFFRDMTKKG ED + YS LICSFA+IREVKVAEEL REA Sbjct: 262 IYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREA 321 Query: 38 ESKKMLRDPAAY 3 E KK+LRDP + Sbjct: 322 EEKKILRDPEVF 333 >ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|222863781|gb|EEF00912.1| predicted protein [Populus trichocarpa] Length = 525 Score = 230 bits (586), Expect = 1e-58 Identities = 118/190 (62%), Positives = 148/190 (77%), Gaps = 2/190 (1%) Frame = -3 Query: 575 EDFEKFHVFPNTSTCCRLISSCIRARKFKLVNKWLDILKADEEIVVLAFETAMKGYNKLH 396 +DF+K++VFP++ T L+SSCIRAR+FK+V L+ K+D +I VLAF++AMKGYNKLH Sbjct: 62 DDFKKYNVFPDSFTFSTLVSSCIRARRFKIVENLLENFKSDSKIAVLAFDSAMKGYNKLH 121 Query: 395 MYSTTIVMYENMKSAGIVLDPGCYCQIMVAYLKTGQNEKIVSLFEEFE-RRIDWTP-FLP 222 MY +TI ++E M AGI LD CYCQIM AY K G EK+V+LF EFE R++D P L Sbjct: 122 MYGSTISVHEKMILAGIPLDSRCYCQIMKAYYKLGDAEKVVALFNEFESRKLDSKPMILR 181 Query: 221 QIYRILCESLGKSGRAFEALEFFRDMTKKGFPEDPSFYSLLICSFANIREVKVAEELMRE 42 QI++ILC SLG+SG+AF+ALE+ RDM KKG ED S YS LICSFANIREV+VAEEL +E Sbjct: 182 QIFKILCLSLGRSGQAFQALEYSRDMRKKGILEDSSIYSSLICSFANIREVEVAEELFKE 241 Query: 41 AESKKMLRDP 12 A K+MLRDP Sbjct: 242 ALEKRMLRDP 251 >ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like [Cucumis sativus] Length = 608 Score = 225 bits (573), Expect = 5e-57 Identities = 107/191 (56%), Positives = 144/191 (75%), Gaps = 1/191 (0%) Frame = -3 Query: 572 DFEKFHVFPNTSTCCRLISSCIRARKFKLVNKWLDILKADEEIVVLAFETAMKGYNKLHM 393 DF F V P+ TC +L+SSC+R RKFK+V L++ + + + + AFE AM+GYNKLHM Sbjct: 143 DFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKSLLEVFERNSGVAMTAFEAAMRGYNKLHM 202 Query: 392 YSTTIVMYENMKSAGIVLDPGCYCQIMVAYLKTGQNEKIVSLFEEFERRI-DWTPFLPQI 216 + +TI++++ +KSA I D GCYC++M AYLK G +E+++ LF E E RI D TPF +I Sbjct: 203 HKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISDSTPFSTKI 262 Query: 215 YRILCESLGKSGRAFEALEFFRDMTKKGFPEDPSFYSLLICSFANIREVKVAEELMREAE 36 Y ILCESL KSGR FE+LEFFRDM KKG ED + YS LIC+FA+I+EVK+AE+L EA+ Sbjct: 263 YGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAK 322 Query: 35 SKKMLRDPAAY 3 +KK+LRDPA + Sbjct: 323 AKKLLRDPAMF 333 >ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like [Cucumis sativus] Length = 608 Score = 224 bits (572), Expect = 6e-57 Identities = 107/191 (56%), Positives = 143/191 (74%), Gaps = 1/191 (0%) Frame = -3 Query: 572 DFEKFHVFPNTSTCCRLISSCIRARKFKLVNKWLDILKADEEIVVLAFETAMKGYNKLHM 393 DF F V P+ TC +L+SSC+R RKFK+V L++ + D + + AFE AM+GYNKLHM Sbjct: 143 DFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKSLLEVFERDSGVAMTAFEAAMRGYNKLHM 202 Query: 392 YSTTIVMYENMKSAGIVLDPGCYCQIMVAYLKTGQNEKIVSLFEEFERRID-WTPFLPQI 216 + +TI++++ +KSA I D GCYC++M AYLK G +E+++ LF E E RI TPF +I Sbjct: 203 HKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISVSTPFSTKI 262 Query: 215 YRILCESLGKSGRAFEALEFFRDMTKKGFPEDPSFYSLLICSFANIREVKVAEELMREAE 36 Y ILCESL KSGR FE+LEFFRDM KKG ED + YS LIC+FA+I+EVK+AE+L EA+ Sbjct: 263 YGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAK 322 Query: 35 SKKMLRDPAAY 3 +KK+LRDPA + Sbjct: 323 AKKLLRDPAMF 333