BLASTX nr result

ID: Panax21_contig00021755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021755
         (1701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vit...   323   7e-86
emb|CBI30623.3| unnamed protein product [Vitis vinifera]              323   7e-86
emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]   294   6e-77
ref|XP_002522498.1| Auxin response factor, putative [Ricinus com...   285   2e-74
ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicu...   274   5e-71

>ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  323 bits (829), Expect = 7e-86
 Identities = 189/357 (52%), Positives = 220/357 (61%), Gaps = 1/357 (0%)
 Frame = -2

Query: 1106 RASSSKFVIPLCKFSKTLATSFSSGMRFKMRFETEDATERRYTGIITGISDVDPIRWPGS 927
            RASSS+F+IPL KFSK++  SFS+GMRFKMR ETEDA ERRYTG+ITGISD+DP+RWPGS
Sbjct: 298  RASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGISDMDPVRWPGS 357

Query: 926  KWRCLMVRWDDAEITRHYRVSPWEIEPSITVSGGSSLVSPGTKRSRISFPTTEQDFPVPK 747
            KWRCL+VRWDD E  RH RVSPWEIE S ++SG  SL  PG+KR+RI  P T  DF VP 
Sbjct: 358  KWRCLLVRWDDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSVP- 416

Query: 746  VLTDGTGMSDFGESSRFQKVLQGQEILGFACLL*WYRSSKTSSP*TDEGALSWFGFHWFL 567
               +G G+SDFGESSRFQKVLQGQEI GF      Y    T      E          F 
Sbjct: 417  ---NGMGVSDFGESSRFQKVLQGQEIFGFNTP---YDGVDTQDHHPSE-------IRCFP 463

Query: 566  GXXXXXXXXXXXXXXXXXXXXSELGNGARNLIGNSDISYEGTGFSESFRFNKVLQGQEIF 387
            G                    + +GNG RN +GNSDISY+G GF ESFRF+KVLQGQE F
Sbjct: 464  G--------------SSCSGIAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETF 509

Query: 386  PNLSYGRGLGINQVQESSSPGIVDGVQAPSCVTGWSSLMQGYTTSMCXXXXXXXXXXXXX 207
            P+   GR L  NQ  E+ S GI DGVQ P+   GW +L+QGY                  
Sbjct: 510  PSPPCGRALSANQAHENGSFGIFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSS 569

Query: 206  XLMFQQPSIPASNFHAPSSVNSREK-FEITNHSSFDNSERFLGKLTSSLPCERSSPG 39
             LMFQQ S  A N ++  S N++EK  EI+N SSFD  E +  KLT S  CE S  G
Sbjct: 570  VLMFQQASTAAPNIYSMHSANNQEKEQEISNRSSFDIPEVYGEKLTPS-RCELSVRG 625


>emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  323 bits (829), Expect = 7e-86
 Identities = 189/357 (52%), Positives = 220/357 (61%), Gaps = 1/357 (0%)
 Frame = -2

Query: 1106 RASSSKFVIPLCKFSKTLATSFSSGMRFKMRFETEDATERRYTGIITGISDVDPIRWPGS 927
            RASSS+F+IPL KFSK++  SFS+GMRFKMR ETEDA ERRYTG+ITGISD+DP+RWPGS
Sbjct: 294  RASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGISDMDPVRWPGS 353

Query: 926  KWRCLMVRWDDAEITRHYRVSPWEIEPSITVSGGSSLVSPGTKRSRISFPTTEQDFPVPK 747
            KWRCL+VRWDD E  RH RVSPWEIE S ++SG  SL  PG+KR+RI  P T  DF VP 
Sbjct: 354  KWRCLLVRWDDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSVP- 412

Query: 746  VLTDGTGMSDFGESSRFQKVLQGQEILGFACLL*WYRSSKTSSP*TDEGALSWFGFHWFL 567
               +G G+SDFGESSRFQKVLQGQEI GF      Y    T      E          F 
Sbjct: 413  ---NGMGVSDFGESSRFQKVLQGQEIFGFNTP---YDGVDTQDHHPSE-------IRCFP 459

Query: 566  GXXXXXXXXXXXXXXXXXXXXSELGNGARNLIGNSDISYEGTGFSESFRFNKVLQGQEIF 387
            G                    + +GNG RN +GNSDISY+G GF ESFRF+KVLQGQE F
Sbjct: 460  G--------------SSCSGIAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETF 505

Query: 386  PNLSYGRGLGINQVQESSSPGIVDGVQAPSCVTGWSSLMQGYTTSMCXXXXXXXXXXXXX 207
            P+   GR L  NQ  E+ S GI DGVQ P+   GW +L+QGY                  
Sbjct: 506  PSPPCGRALSANQAHENGSFGIFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSS 565

Query: 206  XLMFQQPSIPASNFHAPSSVNSREK-FEITNHSSFDNSERFLGKLTSSLPCERSSPG 39
             LMFQQ S  A N ++  S N++EK  EI+N SSFD  E +  KLT S  CE S  G
Sbjct: 566  VLMFQQASTAAPNIYSMHSANNQEKEQEISNRSSFDIPEVYGEKLTPS-RCELSVRG 621


>emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  294 bits (752), Expect = 6e-77
 Identities = 182/386 (47%), Positives = 212/386 (54%), Gaps = 30/386 (7%)
 Frame = -2

Query: 1106 RASSSKFVIPLCKFSKTLATSFSSGMRFKMRFETEDATERRYTGIITGISDVDPIRWPGS 927
            RASSS+F+IPL KFSK++  SFS+GMRFKMR ETEDA ERRYTG+ITGISD+DP+RWPGS
Sbjct: 297  RASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGISDMDPVRWPGS 356

Query: 926  KWRCLM------------------------------VRWDDAEITRHYRVSPWEIEPSIT 837
            KWRCL+                              VRWDD E  RH RVSPWEIE S +
Sbjct: 357  KWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDDIEANRHNRVSPWEIELSGS 416

Query: 836  VSGGSSLVSPGTKRSRISFPTTEQDFPVPKVLTDGTGMSDFGESSRFQKVLQGQEILGFA 657
            +SG  SL  PG+KR+RI  P T  DF VP    +G G+SDFGESSRFQKVLQGQEI GF 
Sbjct: 417  LSGSGSLTVPGSKRTRIGLPGTRPDFSVP----NGMGVSDFGESSRFQKVLQGQEIFGFN 472

Query: 656  CLL*WYRSSKTSSP*TDEGALSWFGFHWFLGXXXXXXXXXXXXXXXXXXXXSELGNGARN 477
                 Y    T      E          F G                    + +GNG RN
Sbjct: 473  TP---YDGVDTQDHHPSE-------IRCFPGSSCSRI--------------AAIGNGVRN 508

Query: 476  LIGNSDISYEGTGFSESFRFNKVLQGQEIFPNLSYGRGLGINQVQESSSPGIVDGVQAPS 297
             +GNSDISY+G GF ESFRF+KVLQGQE FP+   GR L  NQ  E+ S GI DGVQ P+
Sbjct: 509  PLGNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSFGIFDGVQVPT 568

Query: 296  CVTGWSSLMQGYTTSMCXXXXXXXXXXXXXXLMFQQPSIPASNFHAPSSVNSREKFEITN 117
               GW +L+QGY                         S P+    +PSSV  R    ++N
Sbjct: 569  SRNGWPALVQGYNA-------------------HTHLSTPSVQVSSPSSVLMRRSKXLSN 609

Query: 116  HSSFDNSERFLGKLTSSLPCERSSPG 39
             SSFD  E +  KLT S  CE S  G
Sbjct: 610  RSSFDIPEVYGEKLTPS-RCELSVRG 634


>ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
            gi|223538189|gb|EEF39798.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 730

 Score =  285 bits (730), Expect = 2e-74
 Identities = 171/348 (49%), Positives = 201/348 (57%), Gaps = 1/348 (0%)
 Frame = -2

Query: 1106 RASSSKFVIPLCKFSKTLATSFSSGMRFKMRFETEDATERRYTGIITGISDVDPIRWPGS 927
            RASSS+F+IPL KF K+L  SFS GMRFKMRFETEDA ERRY G+ITGISD+DP RWPGS
Sbjct: 301  RASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFETEDAAERRYMGLITGISDLDPARWPGS 360

Query: 926  KWRCLMVRWDDAEITRHYRVSPWEIEPSITVSGGSSLVSPGTKRSRISFPTTEQDFPVPK 747
            KWRCL+VRWDD E  RH RVSPWEIEPS +VS  +S ++PG KRSR  FP+++ +FPVP 
Sbjct: 361  KWRCLVVRWDDMETNRHSRVSPWEIEPSGSVSSCNSFMTPGLKRSRSGFPSSKPEFPVP- 419

Query: 746  VLTDGTGMSDFGESSRFQKVLQGQEILGFACLL*WYRSSKTSSP*TDEGALSWFGFHWFL 567
               DG G SDFGE SRFQKVLQGQEIL F  L      ++  S                 
Sbjct: 420  ---DGIGASDFGEPSRFQKVLQGQEILNFNTLYDGVDQNRHPS----------------- 459

Query: 566  GXXXXXXXXXXXXXXXXXXXXSELGNGARNLIGNSDISYEGTGFSESFRFNKVLQGQEIF 387
                                 +   NGAR+ + NSD+SY+  GFSES RF+KVLQGQEI 
Sbjct: 460  -------DIRRCFPGSRSSMIATTRNGARDPVVNSDVSYKSIGFSESLRFHKVLQGQEII 512

Query: 386  PNLSYGRG-LGINQVQESSSPGIVDGVQAPSCVTGWSSLMQGYTTSMCXXXXXXXXXXXX 210
            P+  +GR     N+  E+   GI DGVQ  S   GWSS+MQGY T +             
Sbjct: 513  PSSPFGRAPASTNEACENGCFGISDGVQMTSSRNGWSSMMQGYNTRI---RPPAQVSSPC 569

Query: 209  XXLMFQQPSIPASNFHAPSSVNSREKFEITNHSSFDNSERFLGKLTSS 66
              LMFQQ S   SN       N  E+  +   S F N E    K  SS
Sbjct: 570  SVLMFQQASNQVSNPSPRYGFNDLEEQGVNTQSWFHNPETCGEKRMSS 617


>ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
            gi|85069277|gb|ABC69710.1| auxin response factor 3
            [Solanum lycopersicum]
          Length = 747

 Score =  274 bits (701), Expect = 5e-71
 Identities = 160/338 (47%), Positives = 197/338 (58%)
 Frame = -2

Query: 1106 RASSSKFVIPLCKFSKTLATSFSSGMRFKMRFETEDATERRYTGIITGISDVDPIRWPGS 927
            R SSS F++P  KFSKTLA  FS+GMRFKMR ETEDA E+R+TG++ G+S+VDP+RWPGS
Sbjct: 303  RDSSSDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSNVDPVRWPGS 362

Query: 926  KWRCLMVRWDDAEITRHYRVSPWEIEPSITVSGGSSLVSPGTKRSRISFPTTEQDFPVPK 747
            KWRCL+VRWDD +++RH RVSPWEIEPS +    SSLV P  KR+R+ FP ++ DFP+P+
Sbjct: 363  KWRCLLVRWDDLDVSRHNRVSPWEIEPSGSAPVPSSLVMPSAKRTRVGFPISKADFPIPR 422

Query: 746  VLTDGTGMSDFGESSRFQKVLQGQEILGFACLL*WYRSSKTSSP*TDEGALSWFGFHWFL 567
               +G  +SDFGE SRFQKVLQGQEIL        Y      SP    G   + GF    
Sbjct: 423  ---EGIAVSDFGEPSRFQKVLQGQEILRMHAP---YGGLDARSP-RPAGTRCFPGF---- 471

Query: 566  GXXXXXXXXXXXXXXXXXXXXSELGNGARNLIGNSDISYEGTGFSESFRFNKVLQGQEIF 387
                                 S +GN  R L G++D S+E  GFSES RFNKVLQGQEIF
Sbjct: 472  ----------------PSSGISRMGNSIRPLFGDTDKSHESIGFSESLRFNKVLQGQEIF 515

Query: 386  PNLSYGRGLGINQVQESSSPGIVDGVQAPSCVTGWSSLMQGYTTSMCXXXXXXXXXXXXX 207
             +  YGR     Q+QE S  GI  G+Q P+    W +  Q   T  C             
Sbjct: 516  TSPPYGRAQAGIQMQEKSRTGIFVGIQVPNHGNRWPAPNQDNNTP-CKPINPVSASSPPS 574

Query: 206  XLMFQQPSIPASNFHAPSSVNSREKFEITNHSSFDNSE 93
             L FQ PS PAS F A  +     K ++ N +S D SE
Sbjct: 575  ALNFQHPSPPASKFQAMFN----HKHDLVNQASLDLSE 608


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