BLASTX nr result

ID: Panax21_contig00021752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021752
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-contai...    69   4e-10
emb|CBI40441.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]    69   4e-10

>ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|222861580|gb|EEE99122.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/119 (40%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
 Frame = -2

Query: 333 VNANNDDENLTDDYDVLLSARNFNDK-----VGTSEKRELNTWGGGVINE----AVDKIV 181
           V   + DENL  D        N ++      V T    E N      I E      ++ V
Sbjct: 10  VKGKDVDENLISDSRKSEKVENEDEVKSVVVVETDGDEEGNKGDNSEIEELDLATFEESV 69

Query: 180 GSRKRKRESISVSEMLNWLTEVAKHPDDPAIGLIPAPSKWKVHGVEEFWVQALLAREAL 4
            SRKRKR+SI    MLNW+TE+AK P DP +G +P  SKWK +G EE W Q L+ RE+L
Sbjct: 70  SSRKRKRDSIY--RMLNWVTEIAKDPCDPVVGSLPEWSKWKSYGNEECWKQVLVTRESL 126


>ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-containing protein 1-like
           [Vitis vinifera]
          Length = 628

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
 Frame = -2

Query: 264 NDKVGTSEKRELNTWGGGV----------INEAVDKIVGSRKRKRESISVSEMLNWLTEV 115
           ND+V +S K EL+     V          +NE V++ V +RKRKRE +    MLNW+T +
Sbjct: 227 NDEVKSSVKLELDLNRKCVDDDEDVMILDLNE-VNEEVFTRKRKREYML--GMLNWVTTI 283

Query: 114 AKHPDDPAIGLIPAPSKWKVHGVEEFWVQALLAREAL 4
           AK+P DP+IG +P  SKWK+ G  E W Q LL REAL
Sbjct: 284 AKNPCDPSIGKLPERSKWKLTGPGELWKQVLLVREAL 320


>emb|CBI40441.3| unnamed protein product [Vitis vinifera]
          Length = 594

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
 Frame = -2

Query: 264 NDKVGTSEKRELNTWGGGV----------INEAVDKIVGSRKRKRESISVSEMLNWLTEV 115
           ND+V +S K EL+     V          +NE V++ V +RKRKRE +    MLNW+T +
Sbjct: 234 NDEVKSSVKLELDLNRKCVDDDEDVMILDLNE-VNEEVFTRKRKREYML--GMLNWVTTI 290

Query: 114 AKHPDDPAIGLIPAPSKWKVHGVEEFWVQALLAREAL 4
           AK+P DP+IG +P  SKWK+ G  E W Q LL REAL
Sbjct: 291 AKNPCDPSIGKLPERSKWKLTGPGELWKQVLLVREAL 327


>ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|222845282|gb|EEE82829.1|
           predicted protein [Populus trichocarpa]
          Length = 648

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = -2

Query: 195 VDKIVGSRKRKRESISVSEMLNWLTEVAKHPDDPAIGLIPAPSKWKVHGVEEFWVQALLA 16
           V K   SRKRKRE ++   MLNW+ ++AK PDDP+IG+     KWK H   E W+QA+ A
Sbjct: 268 VKKEFNSRKRKREPLT--RMLNWVIQIAKCPDDPSIGVRSPQFKWKNHKGNELWLQAIRA 325

Query: 15  REALL 1
           REALL
Sbjct: 326 REALL 330


>emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]
          Length = 724

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
 Frame = -2

Query: 264 NDKVGTSEKRELNTWGGGV----------INEAVDKIVGSRKRKRESISVSEMLNWLTEV 115
           ND+V +S K EL+     V          +NE V++ V +RKRKRE +    MLNW+T +
Sbjct: 227 NDEVKSSVKLELDLNRKCVDDDEDVMILDLNE-VNEEVFTRKRKREYML--GMLNWVTTI 283

Query: 114 AKHPDDPAIGLIPAPSKWKVHGVEEFWVQALLAREAL 4
           AK+P DP+IG +P  SKWK+ G  E W Q LL REAL
Sbjct: 284 AKNPCDPSIGKLPERSKWKLTGPGELWKQVLLVREAL 320


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