BLASTX nr result

ID: Panax21_contig00021748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021748
         (2544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vit...   259   1e-85
emb|CBI30623.3| unnamed protein product [Vitis vinifera]              259   1e-85
emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]   231   3e-77
ref|XP_002522498.1| Auxin response factor, putative [Ricinus com...   214   3e-73
ref|XP_002331957.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-68

>ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  259 bits (662), Expect(2) = 1e-85
 Identities = 147/277 (53%), Positives = 175/277 (63%), Gaps = 2/277 (0%)
 Frame = -2

Query: 863  GSKWRCLMVRWDGAEITLHYRVSPWEIEPSITVSGGSSLVSPGTKRSRISFPTTEQDFPV 684
            GSKWRCL+VRWD  E   H RVSPWEIE S ++SG  SL  PG+KR+RI  P T  DF V
Sbjct: 356  GSKWRCLLVRWDDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSV 415

Query: 683  PKVLTDGTGMSDFGESSRFQ-VLQGQEFLGFHASYDGIEAQKHHPPELMRGRFPGSIGSW 507
            P    +G G+SDFGESSRFQ VLQGQE  GF+  YDG++ Q HHP E+    FPGS  S 
Sbjct: 416  P----NGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEIRC--FPGSSCSG 469

Query: 506  ASELGNGVRNLIGNSDISYEGTGFGESFRFNKVLQGQEIFPNLSYGRGLGINQVQESSSP 327
             + +GNGVRN +GNSDISY+G GFGESFRF+KVLQGQE FP+   GR L  NQ  E+ S 
Sbjct: 470  IAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSF 529

Query: 326  GIVDGVQAPSCVAGWSSLMQGYTTSMCXXXXXXXXXXXXXXLMFQPPSIPASNFHAPSSV 147
            GI DGVQ P+   GW +L+QGY                   LMFQ  S  A N ++  S 
Sbjct: 530  GIFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSSVLMFQQASTAAPNIYSMHSA 589

Query: 146  NSRDK-FEITNHSCFDNSERFLGKLTSSLPCERSSPG 39
            N+++K  EI+N S FD  E +  KLT S  CE S  G
Sbjct: 590  NNQEKEQEISNRSSFDIPEVYGEKLTPS-RCELSVRG 625



 Score = 86.3 bits (212), Expect(2) = 1e-85
 Identities = 45/75 (60%), Positives = 51/75 (68%)
 Frame = -3

Query: 1090 SSEFVIPLRKFLKTLATSFSPGMRFKMRFETEDAAERRXXXXXXXXXXXXXXXXRYMGII 911
            SSEF+IPLRKF K++  SFS GMRFKMR ETEDAAER                 RY G+I
Sbjct: 301  SSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAER-----------------RYTGLI 343

Query: 910  IGISDVDPIRWPGSK 866
             GISD+DP+RWPGSK
Sbjct: 344  TGISDMDPVRWPGSK 358


>emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  259 bits (662), Expect(2) = 1e-85
 Identities = 147/277 (53%), Positives = 175/277 (63%), Gaps = 2/277 (0%)
 Frame = -2

Query: 863  GSKWRCLMVRWDGAEITLHYRVSPWEIEPSITVSGGSSLVSPGTKRSRISFPTTEQDFPV 684
            GSKWRCL+VRWD  E   H RVSPWEIE S ++SG  SL  PG+KR+RI  P T  DF V
Sbjct: 352  GSKWRCLLVRWDDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSV 411

Query: 683  PKVLTDGTGMSDFGESSRFQ-VLQGQEFLGFHASYDGIEAQKHHPPELMRGRFPGSIGSW 507
            P    +G G+SDFGESSRFQ VLQGQE  GF+  YDG++ Q HHP E+    FPGS  S 
Sbjct: 412  P----NGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEIRC--FPGSSCSG 465

Query: 506  ASELGNGVRNLIGNSDISYEGTGFGESFRFNKVLQGQEIFPNLSYGRGLGINQVQESSSP 327
             + +GNGVRN +GNSDISY+G GFGESFRF+KVLQGQE FP+   GR L  NQ  E+ S 
Sbjct: 466  IAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSF 525

Query: 326  GIVDGVQAPSCVAGWSSLMQGYTTSMCXXXXXXXXXXXXXXLMFQPPSIPASNFHAPSSV 147
            GI DGVQ P+   GW +L+QGY                   LMFQ  S  A N ++  S 
Sbjct: 526  GIFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSSVLMFQQASTAAPNIYSMHSA 585

Query: 146  NSRDK-FEITNHSCFDNSERFLGKLTSSLPCERSSPG 39
            N+++K  EI+N S FD  E +  KLT S  CE S  G
Sbjct: 586  NNQEKEQEISNRSSFDIPEVYGEKLTPS-RCELSVRG 621



 Score = 86.3 bits (212), Expect(2) = 1e-85
 Identities = 45/75 (60%), Positives = 51/75 (68%)
 Frame = -3

Query: 1090 SSEFVIPLRKFLKTLATSFSPGMRFKMRFETEDAAERRXXXXXXXXXXXXXXXXRYMGII 911
            SSEF+IPLRKF K++  SFS GMRFKMR ETEDAAER                 RY G+I
Sbjct: 297  SSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAER-----------------RYTGLI 339

Query: 910  IGISDVDPIRWPGSK 866
             GISD+DP+RWPGSK
Sbjct: 340  TGISDMDPVRWPGSK 354


>emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  231 bits (590), Expect(2) = 3e-77
 Identities = 142/306 (46%), Positives = 168/306 (54%), Gaps = 31/306 (10%)
 Frame = -2

Query: 863  GSKWRCLM------------------------------VRWDGAEITLHYRVSPWEIEPS 774
            GSKWRCL+                              VRWD  E   H RVSPWEIE S
Sbjct: 355  GSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDDIEANRHNRVSPWEIELS 414

Query: 773  ITVSGGSSLVSPGTKRSRISFPTTEQDFPVPKVLTDGTGMSDFGESSRFQ-VLQGQEFLG 597
             ++SG  SL  PG+KR+RI  P T  DF VP    +G G+SDFGESSRFQ VLQGQE  G
Sbjct: 415  GSLSGSGSLTVPGSKRTRIGLPGTRPDFSVP----NGMGVSDFGESSRFQKVLQGQEIFG 470

Query: 596  FHASYDGIEAQKHHPPELMRGRFPGSIGSWASELGNGVRNLIGNSDISYEGTGFGESFRF 417
            F+  YDG++ Q HHP E+    FPGS  S  + +GNGVRN +GNSDISY+G GFGESFRF
Sbjct: 471  FNTPYDGVDTQDHHPSEIRC--FPGSSCSRIAAIGNGVRNPLGNSDISYKGIGFGESFRF 528

Query: 416  NKVLQGQEIFPNLSYGRGLGINQVQESSSPGIVDGVQAPSCVAGWSSLMQGYTTSMCXXX 237
            +KVLQGQE FP+   GR L  NQ  E+ S GI DGVQ P+   GW +L+QGY        
Sbjct: 529  HKVLQGQETFPSPPCGRALSANQAHENGSFGIFDGVQVPTSRNGWPALVQGYNAHTHL-- 586

Query: 236  XXXXXXXXXXXLMFQPPSIPASNFHAPSSVNSRDKFEITNHSCFDNSERFLGKLTSSLPC 57
                             S P+    +PSSV  R    ++N S FD  E +  KLT S  C
Sbjct: 587  -----------------STPSVQVSSPSSVLMRRSKXLSNRSSFDIPEVYGEKLTPS-RC 628

Query: 56   ERSSPG 39
            E S  G
Sbjct: 629  ELSVRG 634



 Score = 86.3 bits (212), Expect(2) = 3e-77
 Identities = 45/75 (60%), Positives = 51/75 (68%)
 Frame = -3

Query: 1090 SSEFVIPLRKFLKTLATSFSPGMRFKMRFETEDAAERRXXXXXXXXXXXXXXXXRYMGII 911
            SSEF+IPLRKF K++  SFS GMRFKMR ETEDAAER                 RY G+I
Sbjct: 300  SSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAER-----------------RYTGLI 342

Query: 910  IGISDVDPIRWPGSK 866
             GISD+DP+RWPGSK
Sbjct: 343  TGISDMDPVRWPGSK 357


>ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
            gi|223538189|gb|EEF39798.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 730

 Score =  214 bits (544), Expect(2) = 3e-73
 Identities = 127/268 (47%), Positives = 156/268 (58%), Gaps = 2/268 (0%)
 Frame = -2

Query: 863  GSKWRCLMVRWDGAEITLHYRVSPWEIEPSITVSGGSSLVSPGTKRSRISFPTTEQDFPV 684
            GSKWRCL+VRWD  E   H RVSPWEIEPS +VS  +S ++PG KRSR  FP+++ +FPV
Sbjct: 359  GSKWRCLVVRWDDMETNRHSRVSPWEIEPSGSVSSCNSFMTPGLKRSRSGFPSSKPEFPV 418

Query: 683  PKVLTDGTGMSDFGESSRFQ-VLQGQEFLGFHASYDGIEAQKHHPPELMRGRFPGSIGSW 507
            P    DG G SDFGE SRFQ VLQGQE L F+  YDG++  +H  P  +R  FPGS  S 
Sbjct: 419  P----DGIGASDFGEPSRFQKVLQGQEILNFNTLYDGVDQNRH--PSDIRRCFPGSRSSM 472

Query: 506  ASELGNGVRNLIGNSDISYEGTGFGESFRFNKVLQGQEIFPNLSYGRG-LGINQVQESSS 330
             +   NG R+ + NSD+SY+  GF ES RF+KVLQGQEI P+  +GR     N+  E+  
Sbjct: 473  IATTRNGARDPVVNSDVSYKSIGFSESLRFHKVLQGQEIIPSSPFGRAPASTNEACENGC 532

Query: 329  PGIVDGVQAPSCVAGWSSLMQGYTTSMCXXXXXXXXXXXXXXLMFQPPSIPASNFHAPSS 150
             GI DGVQ  S   GWSS+MQGY T +               LMFQ  S   SN      
Sbjct: 533  FGISDGVQMTSSRNGWSSMMQGYNTRI---RPPAQVSSPCSVLMFQQASNQVSNPSPRYG 589

Query: 149  VNSRDKFEITNHSCFDNSERFLGKLTSS 66
             N  ++  +   S F N E    K  SS
Sbjct: 590  FNDLEEQGVNTQSWFHNPETCGEKRMSS 617



 Score = 90.5 bits (223), Expect(2) = 3e-73
 Identities = 48/75 (64%), Positives = 52/75 (69%)
 Frame = -3

Query: 1090 SSEFVIPLRKFLKTLATSFSPGMRFKMRFETEDAAERRXXXXXXXXXXXXXXXXRYMGII 911
            SSEF+IPL KFLK+L  SFS GMRFKMRFETEDAAER                 RYMG+I
Sbjct: 304  SSEFIIPLHKFLKSLDYSFSVGMRFKMRFETEDAAER-----------------RYMGLI 346

Query: 910  IGISDVDPIRWPGSK 866
             GISD+DP RWPGSK
Sbjct: 347  TGISDLDPARWPGSK 361


>ref|XP_002331957.1| predicted protein [Populus trichocarpa] gi|222874734|gb|EEF11865.1|
            predicted protein [Populus trichocarpa]
          Length = 714

 Score =  202 bits (514), Expect(2) = 2e-68
 Identities = 120/275 (43%), Positives = 156/275 (56%), Gaps = 3/275 (1%)
 Frame = -2

Query: 863  GSKWRCLMVRWDGAEITLHYRVSPWEIEPSIT--VSGGSSLVSPGTKRSRISFPTTEQDF 690
            GSKW+CL+VRWD  E     RVSPWE+EPS +  +S  ++ ++PG KRSR   P+++ +F
Sbjct: 355  GSKWKCLLVRWDDREANRLSRVSPWEVEPSGSGSISSSNNFMAPGLKRSRSGLPSSKAEF 414

Query: 689  PVPKVLTDGTGMSDFGESSRFQ-VLQGQEFLGFHASYDGIEAQKHHPPELMRGRFPGSIG 513
            P+P    DG G   F ESSR Q VLQGQE + F+A YDG++ Q  HP E+ R  FPG   
Sbjct: 415  PIP----DGIGAPGFRESSRSQEVLQGQEIMSFNALYDGVDGQNQHPSEI-RSCFPGYHS 469

Query: 512  SWASELGNGVRNLIGNSDISYEGTGFGESFRFNKVLQGQEIFPNLSYGRGLGINQVQESS 333
            S  + LG+G+R+ I  S+ SY+G GF ES+RF+KV QGQEIFP+  YGR    N+ +E+ 
Sbjct: 470  SGIAALGSGIRDSIATSNNSYKGIGFNESYRFHKVFQGQEIFPSSPYGRIPNANEARENC 529

Query: 332  SPGIVDGVQAPSCVAGWSSLMQGYTTSMCXXXXXXXXXXXXXXLMFQPPSIPASNFHAPS 153
            S G  DGVQ  S   GWS+LMQGY T +               LMFQ  S P     +  
Sbjct: 530  SLGFSDGVQRSSSRNGWSTLMQGYNTQI---RPPAQVSSPSSVLMFQHASNPVPKRSSNF 586

Query: 152  SVNSRDKFEITNHSCFDNSERFLGKLTSSLPCERS 48
            + N   +   T  S F   E   G    S   E S
Sbjct: 587  NFNDHVQQTATTRSWFCGPEMQGGNFKLSAHSEPS 621



 Score = 86.3 bits (212), Expect(2) = 2e-68
 Identities = 45/75 (60%), Positives = 50/75 (66%)
 Frame = -3

Query: 1090 SSEFVIPLRKFLKTLATSFSPGMRFKMRFETEDAAERRXXXXXXXXXXXXXXXXRYMGII 911
            SSEF+IP  KFLK+L  SFS GMRFKMRFETEDAAER                 RY GII
Sbjct: 300  SSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDAAER-----------------RYTGII 342

Query: 910  IGISDVDPIRWPGSK 866
             G+S++DP RWPGSK
Sbjct: 343  TGVSELDPARWPGSK 357


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