BLASTX nr result

ID: Panax21_contig00021697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021697
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   363   2e-98
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              355   8e-96
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   317   1e-84
ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...   312   4e-83
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   303   3e-80

>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  363 bits (932), Expect = 2e-98
 Identities = 188/265 (70%), Positives = 211/265 (79%), Gaps = 11/265 (4%)
 Frame = -2

Query: 764 GSTEHRGFGFVQFAATEDANRAIELKNGSSVGGRKIGVKHAMHRAPLEQRRSKGDQVVHL 585
           GSTEHRGFGFVQFA  EDANRAIELKNGSS+GGRKIGVK AMHR PLEQRRSK +Q VH 
Sbjct: 55  GSTEHRGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHS 114

Query: 584 DAVVKTKMVKDDFSSGVVKHEQTSNSQELE-----------KNVDKSVEPRKAMTVCKSV 438
           D ++KT+  KD  SS VVK    S+ QE+            KN +K VE RKA+  C   
Sbjct: 115 DDIIKTRTEKDS-SSEVVKQGHASDLQEIGSMSLIFSSITFKNTEKHVELRKALKPCTDQ 173

Query: 437 SAEGSCSETQRVARTVIFGGLLNSDMAEVVHRQAKECGTVSSVTYPLSKDELEHHGLAQD 258
           + +GS SE QRVARTVIFGGLLN+DMAEVVH +A+E GTV SVTYPL K+ELEHHGL+QD
Sbjct: 174 ADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQD 233

Query: 257 GCKMDASSVLYTSVKSARACVTMMHQKEISGGFVWARQLGGEGSKTRKWKLIVRNLPFKA 78
           GCK+DAS+VLY+SVK A A V M+HQKEI GG VWARQLGGEGSKT+KWKLIVRNLPFKA
Sbjct: 234 GCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKA 293

Query: 77  KVNEIKDMFSSAGFVWEVFIPQNFE 3
           KV EIKD+FSSAGFVW+ FIPQN E
Sbjct: 294 KVTEIKDIFSSAGFVWDAFIPQNSE 318


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  355 bits (910), Expect = 8e-96
 Identities = 185/254 (72%), Positives = 208/254 (81%)
 Frame = -2

Query: 764 GSTEHRGFGFVQFAATEDANRAIELKNGSSVGGRKIGVKHAMHRAPLEQRRSKGDQVVHL 585
           GSTEHRGFGFVQFA  EDANRAIELKNGSS+GGRKIGVK AMHR PLEQRRSK +Q    
Sbjct: 55  GSTEHRGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQ---- 110

Query: 584 DAVVKTKMVKDDFSSGVVKHEQTSNSQELEKNVDKSVEPRKAMTVCKSVSAEGSCSETQR 405
           D ++KT+  KD  SS VVK    S+ QE+EK+V    E RKA+  C   + +GS SE QR
Sbjct: 111 DDIIKTRTEKDS-SSEVVKQGHASDLQEIEKHV----ELRKALKPCTDQADKGSFSEKQR 165

Query: 404 VARTVIFGGLLNSDMAEVVHRQAKECGTVSSVTYPLSKDELEHHGLAQDGCKMDASSVLY 225
           VARTVIFGGLLN+DMAEVVH +A+E GTV SVTYPL K+ELEHHGL+QDGCK+DAS+VLY
Sbjct: 166 VARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKIDASAVLY 225

Query: 224 TSVKSARACVTMMHQKEISGGFVWARQLGGEGSKTRKWKLIVRNLPFKAKVNEIKDMFSS 45
           +SVK A A V M+HQKEI GG VWARQLGGEGSKT+KWKLIVRNLPFKAKV EIKD+FSS
Sbjct: 226 SSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSS 285

Query: 44  AGFVWEVFIPQNFE 3
           AGFVW+ FIPQN E
Sbjct: 286 AGFVWDAFIPQNSE 299


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  317 bits (813), Expect = 1e-84
 Identities = 166/255 (65%), Positives = 193/255 (75%), Gaps = 4/255 (1%)
 Frame = -2

Query: 764 GSTEHRGFGFVQFAATEDANRAIELKNGSSVGGRKIGVKHAMHRAPLEQRRSKGDQVVHL 585
           GS +HRGFG+VQFA  EDANRAIELKNG+SV GRKI VKHAM R P E+R+SK +Q    
Sbjct: 54  GSAQHRGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPREERQSKPNQAGKT 113

Query: 584 DAVVKTKMVKDDF-SSGVVKHEQTSNSQELEKNVDKSVEPR---KAMTVCKSVSAEGSCS 417
           D + K K   +D  SSG  K+   S  +EL+ +  KS       K   +C  V+ EG CS
Sbjct: 114 DDLTKPKDDDEDGRSSGSEKNVSVSKEEELQVSKQKSTRKPMEIKKSALCDDVADEGGCS 173

Query: 416 ETQRVARTVIFGGLLNSDMAEVVHRQAKECGTVSSVTYPLSKDELEHHGLAQDGCKMDAS 237
           E QRVARTVIFGGL+NSDMAE VH +AKE GTV S+ YPLS  +LE HGL QDGC +DAS
Sbjct: 174 EKQRVARTVIFGGLINSDMAEEVHSKAKEIGTVCSIKYPLSGKDLEQHGLLQDGCTLDAS 233

Query: 236 SVLYTSVKSARACVTMMHQKEISGGFVWARQLGGEGSKTRKWKLIVRNLPFKAKVNEIKD 57
           +VLYTSVKSARA V  +H+KEI GG VWARQLGGEGSKT+KWKLI+RNLPFKAK NEI+D
Sbjct: 234 AVLYTSVKSARASVATLHKKEIGGGNVWARQLGGEGSKTQKWKLIIRNLPFKAKDNEIRD 293

Query: 56  MFSSAGFVWEVFIPQ 12
           MFSSAG+VW+VFIPQ
Sbjct: 294 MFSSAGYVWDVFIPQ 308


>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score =  312 bits (800), Expect = 4e-83
 Identities = 163/256 (63%), Positives = 195/256 (76%), Gaps = 5/256 (1%)
 Frame = -2

Query: 764 GSTEHRGFGFVQFAATEDANRAIELKNGSSVGGRKIGVKHAMHRAPLEQRRSKGDQVVHL 585
           GS +HRGFG+VQFA  EDANRAIELKNG+SV GRKI VKHAM R P E+R+SK ++    
Sbjct: 54  GSAQHRGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPCEERQSKPNKEGKT 113

Query: 584 DAVVKTKMVKDDFS-SGVVKHEQTSNSQELE----KNVDKSVEPRKAMTVCKSVSAEGSC 420
           D + K K   +D + SG  K+      +E++    KN+ K  E +K+  +C  V  EGSC
Sbjct: 114 DDLTKPKDDDEDSTLSGAEKNVSVLKEEEVQVSKQKNMRKPTETKKS-ALCDDVPDEGSC 172

Query: 419 SETQRVARTVIFGGLLNSDMAEVVHRQAKECGTVSSVTYPLSKDELEHHGLAQDGCKMDA 240
           SE QRVARTVIFGGL+NSDMAE VH +A+E GTV S+ YPLS+ +LE HGL QDGC +DA
Sbjct: 173 SEKQRVARTVIFGGLINSDMAEEVHGKAREIGTVCSIKYPLSRKDLEQHGLLQDGCTLDA 232

Query: 239 SSVLYTSVKSARACVTMMHQKEISGGFVWARQLGGEGSKTRKWKLIVRNLPFKAKVNEIK 60
           S+VLYTSVKSARA V  +H+KEI GG +W RQLGGEGSKT+KWKLIVRNLPFKAK NEI+
Sbjct: 233 SAVLYTSVKSARASVATLHRKEIGGGNIWVRQLGGEGSKTQKWKLIVRNLPFKAKENEIR 292

Query: 59  DMFSSAGFVWEVFIPQ 12
           DMFSSAG VW+VFIPQ
Sbjct: 293 DMFSSAGCVWDVFIPQ 308


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  303 bits (776), Expect = 3e-80
 Identities = 164/265 (61%), Positives = 190/265 (71%), Gaps = 11/265 (4%)
 Frame = -2

Query: 764 GSTEHRGFGFVQFAATEDANRAIELKNGSSVGGRKIGVKHAMHRAPLEQRRSK---GDQV 594
           GSTEHRGFGFVQFA  +DANRAIE+KNGSSVGGRKI VKHAMHRA LEQRR+K   G   
Sbjct: 55  GSTEHRGFGFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQ 114

Query: 593 VHLDAVVKTKMVKDDFSSGVVKHEQTSNSQE--------LEKNVDKSVEPRKAMTVCKSV 438
           V  DA   TK + +  S      +   N  E        L   + K  EPRK   +   +
Sbjct: 115 VQDDA---TKTIDEKGSVASKPEKHVLNVLESGWELWYILSCMLRKPREPRKPAKLVTDL 171

Query: 437 SAEGSCSETQRVARTVIFGGLLNSDMAEVVHRQAKECGTVSSVTYPLSKDELEHHGLAQD 258
           + + +CSE QRVARTVIFGGLLN  MAE VH++AKE GTV SVTYPL K+EL+ HGL QD
Sbjct: 172 TDKENCSEKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQD 231

Query: 257 GCKMDASSVLYTSVKSARACVTMMHQKEISGGFVWARQLGGEGSKTRKWKLIVRNLPFKA 78
           GC+  AS+VL+TSVK AR+ V M+HQKEI GG VWARQLGGEG KT+KWKLI+RNLPFKA
Sbjct: 232 GCRSGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKA 291

Query: 77  KVNEIKDMFSSAGFVWEVFIPQNFE 3
           K NEIK +F SAG VW+VF+P N E
Sbjct: 292 KPNEIKGVFESAGCVWDVFVPHNSE 316


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