BLASTX nr result

ID: Panax21_contig00021630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021630
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   481   e-133
ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   471   e-130
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2...   467   e-129
emb|CBI15398.3| unnamed protein product [Vitis vinifera]              463   e-128
ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   459   e-127

>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 590

 Score =  481 bits (1237), Expect = e-133
 Identities = 250/343 (72%), Positives = 274/343 (79%), Gaps = 1/343 (0%)
 Frame = +3

Query: 3    GSGIMSTVTFESMNLSEPTMKAIKDMGFQYTTEIQARSVPLLIEGKDVLGAARTGSGKTL 182
            GSGIMST +FES+ LSEPT KAI++MGFQY T+IQAR++P L+ GKDVLGAARTGSGKTL
Sbjct: 97   GSGIMSTDSFESLGLSEPTRKAIQEMGFQYLTQIQARAIPPLLVGKDVLGAARTGSGKTL 156

Query: 183  AFLVPAVELLYQLHFAPRNGTGVIVICPTRELAIQTHXXXXXXXXXXXXXXXXXXXXXXX 362
            AFL+PAVELLY +HFAPRNGTGV+VICPTRELAIQTH                       
Sbjct: 157  AFLIPAVELLYNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSAR 216

Query: 363  XXXXXXXXXXXXXXXXXXXXXXKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADR 542
                                  KGVNLLVATPGRLLDHLQNTKGFIY  LKCL IDEADR
Sbjct: 217  KGEAERIV--------------KGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADR 262

Query: 543  ILEANFEEEMKQIIKILPKERQAALFSATQTKKVADLARLSLK-DPVYVGVDDERKRVTN 719
            ILEANFEEEMKQIIKILPK RQ ALFSATQTKKV DLARLS +  PVY+ VDD R +VTN
Sbjct: 263  ILEANFEEEMKQIIKILPKSRQTALFSATQTKKVEDLARLSFQITPVYIDVDDGRTKVTN 322

Query: 720  EGLEQGYCVVPCAKRFILLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHG 899
            EGL+QGYCVV  AKRFILLYSFLKR+ S+KVMVFFSS NSVKFHSELL+YI V+CFDIHG
Sbjct: 323  EGLQQGYCVVHSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVECFDIHG 382

Query: 900  QQKQQKRTSTFFDYCKAEKGILLCTDVAARGLDIPSVDWIIQY 1028
            +QKQQKRT+TFFD+CKAEKGILLCTDVAARGLDIP+VDWI+QY
Sbjct: 383  KQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQY 425


>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
            [Vitis vinifera]
          Length = 580

 Score =  471 bits (1212), Expect = e-130
 Identities = 245/343 (71%), Positives = 267/343 (77%), Gaps = 1/343 (0%)
 Frame = +3

Query: 3    GSGIMSTVTFESMNLSEPTMKAIKDMGFQYTTEIQARSVPLLIEGKDVLGAARTGSGKTL 182
            GSGIMST  F ++ LSEPTMKAI DMGF   T+IQAR++P L+ GKDVLGAARTGSGKTL
Sbjct: 85   GSGIMSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTL 144

Query: 183  AFLVPAVELLYQLHFAPRNGTGVIVICPTRELAIQTHXXXXXXXXXXXXXXXXXXXXXXX 362
            AFL+PAVELLY + F PRNGTGV+VICPTRELAIQTH                       
Sbjct: 145  AFLIPAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSAR 204

Query: 363  XXXXXXXXXXXXXXXXXXXXXXKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADR 542
                                  KG NLLVATPGRLLDHLQNTKGFIY  LKCL IDEADR
Sbjct: 205  RGEAERLA--------------KGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADR 250

Query: 543  ILEANFEEEMKQIIKILPKERQAALFSATQTKKVADLARLSLKD-PVYVGVDDERKRVTN 719
            ILEANFEEEMKQIIK+LPKERQ ALFSATQTKKV DLARLS +  PVY+ VDD R +VTN
Sbjct: 251  ILEANFEEEMKQIIKLLPKERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTN 310

Query: 720  EGLEQGYCVVPCAKRFILLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHG 899
            EGL+QGYCVVP AKRF+LLYSFLKR+ S+KVMVFFSS NSVK+HSELL+YI VDC DIHG
Sbjct: 311  EGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHG 370

Query: 900  QQKQQKRTSTFFDYCKAEKGILLCTDVAARGLDIPSVDWIIQY 1028
            +QKQQKRTSTFFD+CKAEKGILLCTDVAARGLDIP VDWI+QY
Sbjct: 371  KQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQY 413


>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
            predicted protein [Populus trichocarpa]
          Length = 574

 Score =  467 bits (1202), Expect = e-129
 Identities = 240/343 (69%), Positives = 271/343 (79%), Gaps = 1/343 (0%)
 Frame = +3

Query: 3    GSGIMSTVTFESMNLSEPTMKAIKDMGFQYTTEIQARSVPLLIEGKDVLGAARTGSGKTL 182
            G GIMST +F+S+ LSE T K I++MGF+  T+IQAR++P L+ GKDVLGAARTGSGKTL
Sbjct: 81   GGGIMSTESFDSLGLSEATRKTIQEMGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTL 140

Query: 183  AFLVPAVELLYQLHFAPRNGTGVIVICPTRELAIQTHXXXXXXXXXXXXXXXXXXXXXXX 362
            AFL+PAVELL+ +HFAPRNGTGV+VICPTRELAIQTH                       
Sbjct: 141  AFLIPAVELLHNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGAAR 200

Query: 363  XXXXXXXXXXXXXXXXXXXXXXKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADR 542
                                  KGVNLLVATPGRLLDHLQNTKGFIY  LKCLTIDEADR
Sbjct: 201  RGEAERLV--------------KGVNLLVATPGRLLDHLQNTKGFIYKNLKCLTIDEADR 246

Query: 543  ILEANFEEEMKQIIKILPKERQAALFSATQTKKVADLARLSLKD-PVYVGVDDERKRVTN 719
            ILEANFEEEMKQIIK+LPK RQ ALFSATQTKKV DLARLS +  PVY+ VDD R +VTN
Sbjct: 247  ILEANFEEEMKQIIKLLPKARQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTN 306

Query: 720  EGLEQGYCVVPCAKRFILLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHG 899
            EGL+QGYCVVP AKRF+LLYSF KR+ S+KVMVFFSS NSVKFH++LL+YI V+CFDIHG
Sbjct: 307  EGLQQGYCVVPSAKRFVLLYSFFKRNLSKKVMVFFSSCNSVKFHADLLRYIQVECFDIHG 366

Query: 900  QQKQQKRTSTFFDYCKAEKGILLCTDVAARGLDIPSVDWIIQY 1028
            +QKQQKRTSTFFD+CKAEKGILLCTDVAARGLDIP+VDWI+Q+
Sbjct: 367  KQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQF 409


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  463 bits (1192), Expect = e-128
 Identities = 241/339 (71%), Positives = 263/339 (77%), Gaps = 1/339 (0%)
 Frame = +3

Query: 15   MSTVTFESMNLSEPTMKAIKDMGFQYTTEIQARSVPLLIEGKDVLGAARTGSGKTLAFLV 194
            MST  F ++ LSEPTMKAI DMGF   T+IQAR++P L+ GKDVLGAARTGSGKTLAFL+
Sbjct: 1    MSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLI 60

Query: 195  PAVELLYQLHFAPRNGTGVIVICPTRELAIQTHXXXXXXXXXXXXXXXXXXXXXXXXXXX 374
            PAVELLY + F PRNGTGV+VICPTRELAIQTH                           
Sbjct: 61   PAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSARRGEA 120

Query: 375  XXXXXXXXXXXXXXXXXXKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADRILEA 554
                              KG NLLVATPGRLLDHLQNTKGFIY  LKCL IDEADRILEA
Sbjct: 121  ERLA--------------KGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEA 166

Query: 555  NFEEEMKQIIKILPKERQAALFSATQTKKVADLARLSLKD-PVYVGVDDERKRVTNEGLE 731
            NFEEEMKQIIK+LPKERQ ALFSATQTKKV DLARLS +  PVY+ VDD R +VTNEGL+
Sbjct: 167  NFEEEMKQIIKLLPKERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQ 226

Query: 732  QGYCVVPCAKRFILLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHGQQKQ 911
            QGYCVVP AKRF+LLYSFLKR+ S+KVMVFFSS NSVK+HSELL+YI VDC DIHG+QKQ
Sbjct: 227  QGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQ 286

Query: 912  QKRTSTFFDYCKAEKGILLCTDVAARGLDIPSVDWIIQY 1028
            QKRTSTFFD+CKAEKGILLCTDVAARGLDIP VDWI+QY
Sbjct: 287  QKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQY 325


>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine max]
          Length = 575

 Score =  459 bits (1180), Expect = e-127
 Identities = 238/343 (69%), Positives = 264/343 (76%), Gaps = 1/343 (0%)
 Frame = +3

Query: 3    GSGIMSTVTFESMNLSEPTMKAIKDMGFQYTTEIQARSVPLLIEGKDVLGAARTGSGKTL 182
            GSGIMST +FES+ LSEPT KAI DMGF + T+IQAR++P L+ GKDVLGAARTGSGKTL
Sbjct: 83   GSGIMSTESFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTL 142

Query: 183  AFLVPAVELLYQLHFAPRNGTGVIVICPTRELAIQTHXXXXXXXXXXXXXXXXXXXXXXX 362
            AFL+PAVELLY + F PRNG GVIVICPTRELAIQTH                       
Sbjct: 143  AFLIPAVELLYNVKFTPRNGAGVIVICPTRELAIQTHAVAKELLKYHSQTLGLVIGGSAR 202

Query: 363  XXXXXXXXXXXXXXXXXXXXXXKGVNLLVATPGRLLDHLQNTKGFIYNRLKCLTIDEADR 542
                                  KG+NLLV TPGRLLDHLQNTKGFIY  LKCL IDEADR
Sbjct: 203  KIEAERIA--------------KGINLLVGTPGRLLDHLQNTKGFIYKNLKCLMIDEADR 248

Query: 543  ILEANFEEEMKQIIKILPKERQAALFSATQTKKVADLARLSLKD-PVYVGVDDERKRVTN 719
            ILEANFEEEMKQIIKILPK RQ ALFSATQTKKV DLARLS +  P+Y+ VDD R +VTN
Sbjct: 249  ILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRTKVTN 308

Query: 720  EGLEQGYCVVPCAKRFILLYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYIHVDCFDIHG 899
            EGL QGY VVPCAKRFI+LYSFLKRHQS+KVMVFFSS NSVKFH+++L  I ++C  IHG
Sbjct: 309  EGLLQGYVVVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFHADILNLIQLNCSSIHG 368

Query: 900  QQKQQKRTSTFFDYCKAEKGILLCTDVAARGLDIPSVDWIIQY 1028
            +QKQQ RT+TFFD+CKAEKGILLCTDVAARGLDIP+VDWI+QY
Sbjct: 369  KQKQQSRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQY 411


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