BLASTX nr result

ID: Panax21_contig00021602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021602
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   145   2e-47
emb|CBI39619.3| unnamed protein product [Vitis vinifera]              145   2e-47
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-42
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-28
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...   104   3e-26

>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  145 bits (365), Expect(2) = 2e-47
 Identities = 67/101 (66%), Positives = 85/101 (84%)
 Frame = +2

Query: 155 LLKFSTDSQFIHIDYSEKVFNHIENPNGFIYNTMMKAYLKRNYPQNAVSLYKLMLQNNVS 334
           LLKFSTDS FI +DYS ++F+ IEN NGF++NTMM+AY++ N  + A+ LYKLM++NNV 
Sbjct: 79  LLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVG 138

Query: 335 PDNYTYPILVQAMAARISIFEGKEVHNHVLKVGFDSDVYVQ 457
           PDNYTYP++VQA A R+  F GKE+H+HVLKVGFDSDVYVQ
Sbjct: 139 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQ 179



 Score = 69.3 bits (168), Expect(2) = 2e-47
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   TLNRRPILKTTINLSILDTHLLQCQNTKQFNQILSQMTFTGYIKDTYAASGFL 161
           T N +P  K TI LSIL+THL  C N KQFN+ILSQM  TG+I DT+AAS  L
Sbjct: 28  TFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLL 80


>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  145 bits (365), Expect(2) = 2e-47
 Identities = 67/101 (66%), Positives = 85/101 (84%)
 Frame = +2

Query: 155 LLKFSTDSQFIHIDYSEKVFNHIENPNGFIYNTMMKAYLKRNYPQNAVSLYKLMLQNNVS 334
           LLKFSTDS FI +DYS ++F+ IEN NGF++NTMM+AY++ N  + A+ LYKLM++NNV 
Sbjct: 67  LLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVG 126

Query: 335 PDNYTYPILVQAMAARISIFEGKEVHNHVLKVGFDSDVYVQ 457
           PDNYTYP++VQA A R+  F GKE+H+HVLKVGFDSDVYVQ
Sbjct: 127 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQ 167



 Score = 69.3 bits (168), Expect(2) = 2e-47
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   TLNRRPILKTTINLSILDTHLLQCQNTKQFNQILSQMTFTGYIKDTYAASGFL 161
           T N +P  K TI LSIL+THL  C N KQFN+ILSQM  TG+I DT+AAS  L
Sbjct: 16  TFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLL 68


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score =  135 bits (339), Expect(2) = 2e-42
 Identities = 62/101 (61%), Positives = 83/101 (82%)
 Frame = +2

Query: 155 LLKFSTDSQFIHIDYSEKVFNHIENPNGFIYNTMMKAYLKRNYPQNAVSLYKLMLQNNVS 334
           LLKFST+  FI+I+ S ++F+HIENPNGFI NTMMK Y++RN P  A+ +YK ML++NV+
Sbjct: 64  LLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVA 123

Query: 335 PDNYTYPILVQAMAARISIFEGKEVHNHVLKVGFDSDVYVQ 457
            DNYTYPIL Q+ + R++ F+GK + +HVLKVGFDSDVY+Q
Sbjct: 124 ADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQ 164



 Score = 62.4 bits (150), Expect(2) = 2e-42
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +3

Query: 24  LKTTINLSILDTHLLQCQNTKQFNQILSQMTFTGYIKDTYAASGFL 161
           LK T+ L IL+THL +CQN KQFNQILSQM  +G+ KD++AAS  L
Sbjct: 20  LKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLL 65


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  127 bits (320), Expect(2) = 1e-28
 Identities = 59/101 (58%), Positives = 78/101 (77%)
 Frame = +2

Query: 155 LLKFSTDSQFIHIDYSEKVFNHIENPNGFIYNTMMKAYLKRNYPQNAVSLYKLMLQNNVS 334
           L+KFST   FIHIDY+ ++FN IEN N F++N M++AY++ N P  A +LYK ML N + 
Sbjct: 16  LIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLG 75

Query: 335 PDNYTYPILVQAMAARISIFEGKEVHNHVLKVGFDSDVYVQ 457
            DNYTYP+L+QA + R S +E K+VHNHVLK+GFDSDVYV+
Sbjct: 76  ADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVR 116



 Score = 23.9 bits (50), Expect(2) = 1e-28
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 111 MTFTGYIKDTYAAS 152
           M  TG+I++TYAAS
Sbjct: 1   MLLTGFIRETYAAS 14


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  104 bits (259), Expect(2) = 3e-26
 Identities = 50/103 (48%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = +2

Query: 155 LLKFSTDSQ-FIHIDYSEKVFNHIENPNGFIYNTMMKAYLK-RNYPQNAVSLYKLMLQNN 328
           L+ FS+ S   +   YS ++FNH+ NPN F +NT+M+A+L  +N P  A+  YKL L ++
Sbjct: 41  LINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASH 100

Query: 329 VSPDNYTYPILVQAMAARISIFEGKEVHNHVLKVGFDSDVYVQ 457
             PD+YTYPIL+Q  AAR+S FEG+++H H +  GFD DVYV+
Sbjct: 101 AKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVR 143



 Score = 39.3 bits (90), Expect(2) = 3e-26
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +3

Query: 36  INLSILDTHLLQCQNTKQFNQILSQMTFTGYIKDTYAASGFLN 164
           + +S LD+ L  C+  + F Q+LSQ   TG I D YAAS  +N
Sbjct: 1   MKVSTLDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLIN 43


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