BLASTX nr result

ID: Panax21_contig00021594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021594
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530725.1| rnf5, putative [Ricinus communis] gi|2235297...   100   9e-20
ref|XP_002279934.1| PREDICTED: uncharacterized protein LOC100260...    95   5e-18
ref|XP_002309298.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|NP_001240122.1| uncharacterized protein LOC100811099 [Glycin...    87   1e-15
ref|XP_003521218.1| PREDICTED: uncharacterized protein LOC100782...    86   4e-15

>ref|XP_002530725.1| rnf5, putative [Ricinus communis] gi|223529739|gb|EEF31679.1| rnf5,
           putative [Ricinus communis]
          Length = 427

 Score =  100 bits (250), Expect = 9e-20
 Identities = 58/128 (45%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
 Frame = +1

Query: 31  MGDETPNTMNLDLNLGPVVNPDDEPGLGSLSSESMNLEEWLDEPVHRLREAFMXXXXXXX 210
           MG+ET +TMNLDLNLGP      E G GS+SSE++N + W+D+P+ R+REA         
Sbjct: 1   MGEETSDTMNLDLNLGP----GPEVGSGSISSEAVNFDGWVDDPLERIREAVRISNRARQ 56

Query: 211 XXXXXXXSVWRQAPIPPGARNFALELMAGTG-------LEMGEGSVAAEERPAEVTKTCD 369
                    WRQ   PP +   ++EL    G       L+ GEGSVAAEER  EV K C+
Sbjct: 57  RWR------WRQYQFPPESHTLSVELNQLIGNSDSVSTLQAGEGSVAAEERTNEVPKMCE 110

Query: 370 TNNGYLED 393
            NNG+LED
Sbjct: 111 NNNGFLED 118


>ref|XP_002279934.1| PREDICTED: uncharacterized protein LOC100260713 isoform 1 [Vitis
           vinifera] gi|359482169|ref|XP_003632722.1| PREDICTED:
           uncharacterized protein LOC100260713 [Vitis vinifera]
          Length = 410

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
 Frame = +1

Query: 31  MGDETPN-TMNLDLNLGPVVNPDDEPGLGSLSSESMNLEEWLDEPVHRLREAFMXXXXXX 207
           MGDET + TMNLDLNLGP      EPG GS  ++ ++L +W+ EPVHR+RE+        
Sbjct: 1   MGDETSDHTMNLDLNLGP----GPEPGSGS--NDPVSLNDWVQEPVHRIRESLRLRTRQR 54

Query: 208 XXXXXXXXSVWRQAPIPPGARNFALELMAGTGL----EMGEGSVAAEERPAEVTKTCDTN 375
                     WRQ  IP  ARN ++ELMA TG     + GEGSVAAEER  EV K C+  
Sbjct: 55  WR--------WRQVQIPLEARNISMELMANTGNGSRPQEGEGSVAAEERDNEVPKMCENK 106

Query: 376 NGYLED 393
             ++ED
Sbjct: 107 TTHVED 112


>ref|XP_002309298.1| predicted protein [Populus trichocarpa] gi|222855274|gb|EEE92821.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
 Frame = +1

Query: 31  MGDETPNTMNLDLNLGPVVNPDDEPGLGSLSSESMNLEEWLDEPVHRLREAFMXXXXXXX 210
           MG+ T +TMNLDLNLGP      E      S+E+MNL++W+D+P+ R+REA         
Sbjct: 1   MGEATSDTMNLDLNLGPGPEAGSEL---EASNEAMNLDDWVDDPIMRIREAVRIGAREAR 57

Query: 211 XXXXXXXSVWRQAPIPPGARNFALEL---MAGTG----LEMGEGSVAAEERPAEVTKTCD 369
                    WRQ  +P   ++ ++EL   MA +G    L+ GEGSVAAEER  EV K C+
Sbjct: 58  EHRR-----WRQFQVPQQTQSLSVELNQLMANSGHVGTLQAGEGSVAAEERTNEVPKMCE 112

Query: 370 TNNGYLED 393
            NNG+LED
Sbjct: 113 NNNGFLED 120


>ref|NP_001240122.1| uncharacterized protein LOC100811099 [Glycine max]
           gi|255645563|gb|ACU23276.1| unknown [Glycine max]
          Length = 442

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 55/138 (39%), Positives = 70/138 (50%), Gaps = 17/138 (12%)
 Frame = +1

Query: 31  MGDETPNTMNLDLNLGPVVNPDDEPGLGSLSSESMNLEEWLDEPVHRLREAFMXXXXXXX 210
           M +ET + MNLDLNLGP      EP  G +S+E++NL++W+ EP+ R+ EA         
Sbjct: 1   MEEETSDAMNLDLNLGP----GPEPETGPMSNEAVNLDDWIGEPLQRISEAVRRARQRWR 56

Query: 211 XXXXXXX----------SVWRQAPIPPGARNFALELMA-------GTGLEMGEGSVAAEE 339
                               R   IPP ARN ++EL         G+ L+ GEGSVAAEE
Sbjct: 57  WRHLPLPHPEFHAHFPTEATRHFQIPPEARNISVELNHFLVNSGNGSALQAGEGSVAAEE 116

Query: 340 RPAEVTKTCDTNNGYLED 393
           R  EV K CD  NG  ED
Sbjct: 117 RMEEVPKACDNVNGVAED 134


>ref|XP_003521218.1| PREDICTED: uncharacterized protein LOC100782225 isoform 1 [Glycine
           max] gi|356504874|ref|XP_003521219.1| PREDICTED:
           uncharacterized protein LOC100782225 isoform 2 [Glycine
           max]
          Length = 442

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 56/147 (38%), Positives = 72/147 (48%), Gaps = 26/147 (17%)
 Frame = +1

Query: 31  MGDETPNTMNLDLNLGPVVNPDDEPGLGSLSSESMNLEEWLDEPVHRLREAFMXXXXXXX 210
           M +ET + MNLDLNLGP      EP  G +S+E++NL++W+ EP+ R+ EA         
Sbjct: 1   MEEETSDAMNLDLNLGP----GPEPETGPISNEAVNLDDWIGEPLQRISEAVRYRARQRW 56

Query: 211 XXXXXXXSVWRQAP-------------------IPPGARNFALELMA-------GTGLEM 312
                    WRQ P                   IPP A N ++EL         G+ L+ 
Sbjct: 57  R--------WRQLPLPPPEFHAHFPTEATRHFQIPPEAHNISVELNHFLVNSGNGSALQA 108

Query: 313 GEGSVAAEERPAEVTKTCDTNNGYLED 393
           GEGSVAAEER  EV K C+  NG  ED
Sbjct: 109 GEGSVAAEERMEEVPKACENINGVAED 135


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