BLASTX nr result

ID: Panax21_contig00021544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021544
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-...    74   4e-11
gb|AFJ00030.1| telomerase reverse transcriptase variant C, parti...    67   4e-09
gb|AAD54276.1|AF172097_1 telomerase reverse transcriptase cataly...    67   5e-09
ref|NP_197187.1| telomerase reverse transcriptase [Arabidopsis t...    67   5e-09
gb|AEB33868.1| telomerase reverse transcriptase, partial [Nicoti...    67   5e-09

>ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-like [Glycine max]
          Length = 1097

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
 Frame = +3

Query: 30  KRSKK--VPAVLWRRYGKTTRKLSEAIISLIPRSASTAEXXXXXXXXXXXXXXXD-FLLR 200
           K +KK  VP VLWR +G   R LS  IISL+P  +  A                + FLLR
Sbjct: 4   KHNKKPAVPGVLWRMFGARARTLSSTIISLLPPPSPPALCHCRGRGCLGCAVDAEKFLLR 63

Query: 201 PEDPFDYHNLLNRCFVVIPRYAP-PLPAYNPYS 296
           PEDP DY  LL++CFV +PR AP PLP ++P S
Sbjct: 64  PEDPSDYRELLSKCFVAVPRNAPSPLPFFSPLS 96


>gb|AFJ00030.1| telomerase reverse transcriptase variant C, partial [Nicotiana
           sylvestris]
          Length = 109

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
 Frame = +3

Query: 24  MAKRSKKVPAVLWRRYGKTTRKLSEAIISLIPRSAST--AEXXXXXXXXXXXXXXXDFLL 197
           M+ +  +VP VLWR +    R L   I+SL+P   ST                    FL+
Sbjct: 1   MSTKRPRVPPVLWRLFHNRARTLGHTILSLVPSKTSTNCLCKGRQCLGCVGENGATSFLI 60

Query: 198 RPEDPFDYHNLLNRCFVVIPRYAPPLPAYNPYSRWPLDEV 317
           R +D  DY  LLN+CFVV+    PPL  Y+P+ RW   EV
Sbjct: 61  REKDSDDYRKLLNKCFVVLSDSTPPLHVYDPHCRWSHLEV 100


>gb|AAD54276.1|AF172097_1 telomerase reverse transcriptase catalytic subunit [Arabidopsis
           thaliana]
          Length = 1123

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
 Frame = +3

Query: 30  KRSKKVPAVLWRRYGKTTRKLSEAIISLIPRSASTAEXXXXXXXXXXXXXXXD--FLLRP 203
           K   +VP +LWR +G   R L++AI+ LIP      E                  FLLR 
Sbjct: 4   KPRHRVPEILWRLFGNRARNLNDAIVDLIPNRNIQPEQCRCRGQGCLGCSSDKPAFLLRS 63

Query: 204 EDPFDYHNLLNRCFVVIPRYAPPLPAYNPYSRWPLDEVCQ 323
           +DP  Y  LL+RCFVV+    PPL  ++P S W   E+ +
Sbjct: 64  DDPIHYRKLLHRCFVVLHEQTPPLLDFSPTSWWSQREIVE 103


>ref|NP_197187.1| telomerase reverse transcriptase [Arabidopsis thaliana]
           gi|75207101|sp|Q9SPU7.1|TERT_ARATH RecName:
           Full=Telomerase reverse transcriptase; Short=AtTERT
           gi|5880683|gb|AAD54777.1|AF135454_1 telomerase reverse
           transcriptase [Arabidopsis thaliana]
           gi|9755737|emb|CAC01849.1| telomerase reverse
           transcriptase [Arabidopsis thaliana]
           gi|332004966|gb|AED92349.1| telomerase reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1123

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
 Frame = +3

Query: 30  KRSKKVPAVLWRRYGKTTRKLSEAIISLIPRSASTAEXXXXXXXXXXXXXXXD--FLLRP 203
           K   +VP +LWR +G   R L++AI+ LIP      E                  FLLR 
Sbjct: 4   KPRHRVPEILWRLFGNRARNLNDAIVDLIPNRNIQPEQCRCRGQGCLGCSSDKPAFLLRS 63

Query: 204 EDPFDYHNLLNRCFVVIPRYAPPLPAYNPYSRWPLDEVCQ 323
           +DP  Y  LL+RCFVV+    PPL  ++P S W   E+ +
Sbjct: 64  DDPIHYRKLLHRCFVVLHEQTPPLLDFSPTSWWSQREIVE 103


>gb|AEB33868.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 181

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = +3

Query: 24  MAKRSKKVPAVLWRRYGKTTRKLSEAIISLIPRSAST--AEXXXXXXXXXXXXXXXDFLL 197
           M+ +  +VP VLWR +    R L   I+SL+P   ST                    FL+
Sbjct: 1   MSTKRPRVPPVLWRLFHNRARTLGHTILSLVPSKTSTNCLCKGRQCLGCVGENGATSFLI 60

Query: 198 RPEDPFDYHNLLNRCFVVIPRYAPPLPAYNPYSRW 302
           R +D  DY  LLN+CFVV+    PPL  Y+P+ RW
Sbjct: 61  REKDSDDYRKLLNKCFVVLSDSTPPLHVYDPHCRW 95


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