BLASTX nr result

ID: Panax21_contig00021506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021506
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274977.1| PREDICTED: uncharacterized protein LOC100240...   170   1e-40
gb|ADI50287.1| plastid RNA-binding protein 1 [Nicotiana benthami...   162   3e-38
ref|XP_002534216.1| ATP binding protein, putative [Ricinus commu...   157   6e-37
ref|XP_004165469.1| PREDICTED: uncharacterized LOC101220703 [Cuc...   157   8e-37
ref|XP_004147935.1| PREDICTED: uncharacterized protein LOC101220...   155   2e-36

>ref|XP_002274977.1| PREDICTED: uncharacterized protein LOC100240813 [Vitis vinifera]
           gi|147770641|emb|CAN73407.1| hypothetical protein
           VITISV_024372 [Vitis vinifera]
          Length = 274

 Score =  170 bits (431), Expect = 1e-40
 Identities = 93/135 (68%), Positives = 105/135 (77%)
 Frame = -2

Query: 407 MSILNMSLPPQTPLHNLPSSCRVLSDQTQFSLIPKFSHLSLNXXXXXXXXTIIRMGGGPR 228
           MSI+++S+P   PL NL  S RVL+      L  K S LSL         T+IRMGGGPR
Sbjct: 1   MSIMSLSIP--IPLRNLSFS-RVLTGPDNAFLETKLSQLSLGTAQFPAKTTLIRMGGGPR 57

Query: 227 TYPGGVNKWQWKRMQAKKSKQLLKARLARERQIYEMRKRAELKAAVSELERPWEVVEKAP 48
           TYPGGV+KWQWKRMQAKK+KQLLKARL RERQ+YEMRKRAELKAAVSELERPWEVVE+AP
Sbjct: 58  TYPGGVSKWQWKRMQAKKAKQLLKARLCRERQMYEMRKRAELKAAVSELERPWEVVERAP 117

Query: 47  KLFSASADEQVQVLA 3
            L S SADEQ++VLA
Sbjct: 118 TLLSVSADEQLKVLA 132


>gb|ADI50287.1| plastid RNA-binding protein 1 [Nicotiana benthamiana]
          Length = 326

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/120 (71%), Positives = 94/120 (78%), Gaps = 3/120 (2%)
 Frame = -2

Query: 353 SSCRVLSDQTQFSLIPKFSHLSLNXXXXXXXXT---IIRMGGGPRTYPGGVNKWQWKRMQ 183
           SS + +S  +Q  L  KF  L+L+             IRMGGGPRTYPGGV+KWQWKRMQ
Sbjct: 17  SSSKTISGASQLFLSTKFCTLNLSTTTITNIPYKSSTIRMGGGPRTYPGGVSKWQWKRMQ 76

Query: 182 AKKSKQLLKARLARERQIYEMRKRAELKAAVSELERPWEVVEKAPKLFSASADEQVQVLA 3
           AKK+KQLLKARLARERQIYEMRKRAELKAAVSELERPWEVVEKAP LFS SADEQ+ VLA
Sbjct: 77  AKKAKQLLKARLARERQIYEMRKRAELKAAVSELERPWEVVEKAPTLFSVSADEQLSVLA 136


>ref|XP_002534216.1| ATP binding protein, putative [Ricinus communis]
           gi|223525692|gb|EEF28167.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  157 bits (398), Expect = 6e-37
 Identities = 79/97 (81%), Positives = 84/97 (86%)
 Frame = -2

Query: 293 LSLNXXXXXXXXTIIRMGGGPRTYPGGVNKWQWKRMQAKKSKQLLKARLARERQIYEMRK 114
           LSL         T+IRMGGGPRTYPGGV+KWQWKRMQAKK+KQLLKARL RERQIYEMRK
Sbjct: 28  LSLKTPPIPRKTTVIRMGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRK 87

Query: 113 RAELKAAVSELERPWEVVEKAPKLFSASADEQVQVLA 3
           RAELKAAVSELERPWEVVE+AP LFS  ADEQV+VLA
Sbjct: 88  RAELKAAVSELERPWEVVERAPNLFSVKADEQVKVLA 124


>ref|XP_004165469.1| PREDICTED: uncharacterized LOC101220703 [Cucumis sativus]
          Length = 336

 Score =  157 bits (397), Expect = 8e-37
 Identities = 84/132 (63%), Positives = 94/132 (71%)
 Frame = -2

Query: 398 LNMSLPPQTPLHNLPSSCRVLSDQTQFSLIPKFSHLSLNXXXXXXXXTIIRMGGGPRTYP 219
           L +S+P + PL +   S   L+     S +P                 +IRMGGGPRTYP
Sbjct: 8   LAISIPSRPPLFSFSQS---LTGANHLSYLPN------RMPILTKTTPLIRMGGGPRTYP 58

Query: 218 GGVNKWQWKRMQAKKSKQLLKARLARERQIYEMRKRAELKAAVSELERPWEVVEKAPKLF 39
           GGV+KWQWKRMQAKK KQLLKARL RERQIYEMRKRAELKAAVS+LERPWEVVEKAP LF
Sbjct: 59  GGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLF 118

Query: 38  SASADEQVQVLA 3
           S  ADEQV+VLA
Sbjct: 119 SVGADEQVKVLA 130


>ref|XP_004147935.1| PREDICTED: uncharacterized protein LOC101220703 [Cucumis sativus]
          Length = 363

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/84 (89%), Positives = 79/84 (94%)
 Frame = -2

Query: 254 IIRMGGGPRTYPGGVNKWQWKRMQAKKSKQLLKARLARERQIYEMRKRAELKAAVSELER 75
           +IRMGGGPRTYPGGV+KWQWKRMQAKK KQLLKARL RERQIYEMRKRAELKAAVS+LER
Sbjct: 74  LIRMGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLER 133

Query: 74  PWEVVEKAPKLFSASADEQVQVLA 3
           PWEVVEKAP LFS  ADEQV+VLA
Sbjct: 134 PWEVVEKAPNLFSVGADEQVKVLA 157


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