BLASTX nr result

ID: Panax21_contig00021488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021488
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19301.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002283694.2| PREDICTED: MADS-box transcription factor 27 ...    79   4e-13
ref|XP_002307325.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
emb|CAN68105.1| hypothetical protein VITISV_002570 [Vitis vinifera]    79   4e-13
ref|XP_003615360.1| MADS-box protein [Medicago truncatula] gi|35...    74   1e-11

>emb|CBI19301.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/57 (73%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
 Frame = +3

Query: 3   VYGTRDADGTNRNALLINGLSIGDDPHAPIHLQLCQPQQRNYE-TPTQAPKLG-LQL 167
           VYGTR+ +GTNRNA   NGLSIG+D H PIHLQLCQPQQ+NYE TP +A KLG LQL
Sbjct: 184 VYGTREVNGTNRNAFT-NGLSIGEDLHVPIHLQLCQPQQQNYETTPARATKLGRLQL 239


>ref|XP_002283694.2| PREDICTED: MADS-box transcription factor 27 [Vitis vinifera]
          Length = 320

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/53 (73%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +3

Query: 3   VYGTRDADGTNRNALLINGLSIGDDPHAPIHLQLCQPQQRNYE-TPTQAPKLG 158
           VYGTR+ +GTNRNA   NGLSIG+D H PIHLQLCQPQQ+NYE TP +A KLG
Sbjct: 184 VYGTREVNGTNRNAFT-NGLSIGEDLHVPIHLQLCQPQQQNYETTPARATKLG 235


>ref|XP_002307325.1| predicted protein [Populus trichocarpa] gi|222856774|gb|EEE94321.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = +3

Query: 3   VYGTRDADGTNRNALLINGLSIGDDPHAPIHLQLCQPQQRNYETPTQAPKLG 158
           VYGTR+ +G NRN+LL NGL +G++ H P+HLQL QPQQ+NY+TP  A KLG
Sbjct: 184 VYGTREVNGANRNSLLTNGLGMGEESHVPVHLQLSQPQQQNYDTPASATKLG 235


>emb|CAN68105.1| hypothetical protein VITISV_002570 [Vitis vinifera]
          Length = 123

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/53 (73%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +3

Query: 3   VYGTRDADGTNRNALLINGLSIGDDPHAPIHLQLCQPQQRNYE-TPTQAPKLG 158
           VYGTR+ +GTNRNA   NGLSIG+D H PIHLQLCQPQQ+NYE TP +A KLG
Sbjct: 72  VYGTREVNGTNRNAFT-NGLSIGEDLHVPIHLQLCQPQQQNYETTPARATKLG 123


>ref|XP_003615360.1| MADS-box protein [Medicago truncatula] gi|355516695|gb|AES98318.1|
           MADS-box protein [Medicago truncatula]
          Length = 169

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +3

Query: 3   VYGTRDADGTNRNALLINGLSIGDDPHAPIHLQLCQPQQRNYETPTQAPKLGLQLH 170
           VYGT+D +GTNR   L NG+ IGDD + P++LQL QPQQ++Y+ P+   KLGLQLH
Sbjct: 114 VYGTKDKNGTNRVLSLTNGVGIGDDSNVPVNLQLSQPQQQHYKAPSGTTKLGLQLH 169


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