BLASTX nr result

ID: Panax21_contig00021472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021472
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631348.1| PREDICTED: helicase SWR1-like [Vitis vinifer...   538   e-151
ref|XP_002875114.1| CHR19/ETL1 [Arabidopsis lyrata subsp. lyrata...   526   e-147
ref|XP_002314744.1| chromatin remodeling complex subunit [Populu...   523   e-146
gb|ACQ90605.1| SWI/SNF helicase-like protein [Eutrema halophilum]     522   e-146
ref|XP_003529186.1| PREDICTED: helicase swr1-like [Glycine max]       521   e-146

>ref|XP_003631348.1| PREDICTED: helicase SWR1-like [Vitis vinifera]
            gi|297738311|emb|CBI27512.3| unnamed protein product
            [Vitis vinifera]
          Length = 728

 Score =  538 bits (1387), Expect = e-151
 Identities = 267/310 (86%), Positives = 285/310 (91%)
 Frame = -3

Query: 933  ACDRYAEVESSSVRIVTQDDIYKASMAEDSGFQPLLKPYQLVGVNFLLFLYRKRIAGAIL 754
            ACDRYAEVESSSVRIVTQDDI  A  AEDS FQP+LKPYQLVGVNFLL LYRK I GAIL
Sbjct: 143  ACDRYAEVESSSVRIVTQDDIDVACGAEDSDFQPVLKPYQLVGVNFLLLLYRKGIGGAIL 202

Query: 753  ADEMGLGKTIQAITYLTLLNHLEHDPGPHLIVCPASVLENWERELKKWCPTFNVLQYHGA 574
            ADEMGLGKTIQAITYLTLL H+++DPGPHL+VCPASVLENWERELKKWCP+F V+QYHGA
Sbjct: 203  ADEMGLGKTIQAITYLTLLKHMDNDPGPHLVVCPASVLENWERELKKWCPSFTVIQYHGA 262

Query: 573  ARSVYSKELSSIAKNGSATPFNVILVCYSLFERHSAQQKDDRKILKRWR*SCLLMDEAHA 394
             R+ YSKEL+S++K G   PFNV+LVCYSLFERHS QQKDDRK+LKRW+ SC+LMDEAHA
Sbjct: 263  GRTHYSKELNSLSKAGLPPPFNVLLVCYSLFERHSQQQKDDRKLLKRWQWSCVLMDEAHA 322

Query: 393  LKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDLFETGDVDLKKLL 214
            LKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFM+PDLF TGDVDLKKLL
Sbjct: 323  LKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFTTGDVDLKKLL 382

Query: 213  NAEDRDLITRMKSILGPFILRRLKSDVMQQLVPKIQKVEYVRMEKQQVDAYKEAIEEYRA 34
            NAEDRDLI RMKSILGPFILRRLKSDVMQQLVPKIQ+VEYV MEK Q DAYKEAIEEYRA
Sbjct: 383  NAEDRDLIARMKSILGPFILRRLKSDVMQQLVPKIQRVEYVYMEKNQEDAYKEAIEEYRA 442

Query: 33   ASHARISKSS 4
            AS ARI+K S
Sbjct: 443  ASRARIAKIS 452


>ref|XP_002875114.1| CHR19/ETL1 [Arabidopsis lyrata subsp. lyrata]
            gi|297320952|gb|EFH51373.1| CHR19/ETL1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 764

 Score =  526 bits (1355), Expect = e-147
 Identities = 259/309 (83%), Positives = 283/309 (91%)
 Frame = -3

Query: 930  CDRYAEVESSSVRIVTQDDIYKASMAEDSGFQPLLKPYQLVGVNFLLFLYRKRIAGAILA 751
            CDRY+EVE+S+VRIVTQ+DI  A  AEDS FQP+LKPYQLVGVNFLL LY+K I GAILA
Sbjct: 180  CDRYSEVETSTVRIVTQNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILA 239

Query: 750  DEMGLGKTIQAITYLTLLNHLEHDPGPHLIVCPASVLENWERELKKWCPTFNVLQYHGAA 571
            DEMGLGKTIQAITYLTLLN L +DPGPHL+VCPASVLENWEREL+KWCP+F VLQYHGAA
Sbjct: 240  DEMGLGKTIQAITYLTLLNRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAA 299

Query: 570  RSVYSKELSSIAKNGSATPFNVILVCYSLFERHSAQQKDDRKILKRWR*SCLLMDEAHAL 391
            R+ YS+EL+S++K G   PFNV+LVCYSLFERHS QQKDDRK+LKRWR SC+LMDEAHAL
Sbjct: 300  RAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHAL 359

Query: 390  KDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDLFETGDVDLKKLLN 211
            KDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPD+F T +VDLKKLLN
Sbjct: 360  KDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLN 419

Query: 210  AEDRDLITRMKSILGPFILRRLKSDVMQQLVPKIQKVEYVRMEKQQVDAYKEAIEEYRAA 31
            AED +LITRMKSILGPFILRRLKSDVMQQLVPKIQ+VEYV MEK+Q DAYKEAIEEYRAA
Sbjct: 420  AEDTELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMEKKQEDAYKEAIEEYRAA 479

Query: 30   SHARISKSS 4
            S AR+ K S
Sbjct: 480  SQARLVKLS 488


>ref|XP_002314744.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222863784|gb|EEF00915.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 752

 Score =  523 bits (1347), Expect = e-146
 Identities = 261/310 (84%), Positives = 279/310 (90%)
 Frame = -3

Query: 933  ACDRYAEVESSSVRIVTQDDIYKASMAEDSGFQPLLKPYQLVGVNFLLFLYRKRIAGAIL 754
            +CDRYAEVE+SSV+IVTQDDI  A    DS FQP+LKPYQLVGVNFLL L+RK I GAIL
Sbjct: 169  SCDRYAEVEASSVKIVTQDDIDAACAVADSDFQPVLKPYQLVGVNFLLLLHRKGIGGAIL 228

Query: 753  ADEMGLGKTIQAITYLTLLNHLEHDPGPHLIVCPASVLENWERELKKWCPTFNVLQYHGA 574
            ADEMGLGKTIQAITYLTLL +L +DPGPHLIVCPAS+LENWERELKKWCP+F+VLQYHGA
Sbjct: 229  ADEMGLGKTIQAITYLTLLKYLHNDPGPHLIVCPASLLENWERELKKWCPSFSVLQYHGA 288

Query: 573  ARSVYSKELSSIAKNGSATPFNVILVCYSLFERHSAQQKDDRKILKRWR*SCLLMDEAHA 394
             RS YSKEL S+AK G   PFNV+LVCYSLFERHSAQQKDDRKILKRW+ SC++MDEAHA
Sbjct: 289  TRSAYSKELGSLAKAGLPPPFNVLLVCYSLFERHSAQQKDDRKILKRWQWSCVIMDEAHA 348

Query: 393  LKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDLFETGDVDLKKLL 214
            LKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFM+PDLF T D DLKKLL
Sbjct: 349  LKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDEDLKKLL 408

Query: 213  NAEDRDLITRMKSILGPFILRRLKSDVMQQLVPKIQKVEYVRMEKQQVDAYKEAIEEYRA 34
            NAED DLI RMKSILGPFILRRLKSDVMQQLVPKIQ+VEYV MEK Q  AYKEAIEEYRA
Sbjct: 409  NAEDGDLIGRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVSMEKHQEYAYKEAIEEYRA 468

Query: 33   ASHARISKSS 4
             SHARI+K S
Sbjct: 469  VSHARIAKVS 478


>gb|ACQ90605.1| SWI/SNF helicase-like protein [Eutrema halophilum]
          Length = 768

 Score =  522 bits (1345), Expect = e-146
 Identities = 260/315 (82%), Positives = 283/315 (89%), Gaps = 6/315 (1%)
 Frame = -3

Query: 930  CDRYAEVESSSVRIVTQDDIYKASMAEDSGFQPLLKPYQLVGVNFLLFLYRKRIAGAILA 751
            CDRY+EVE+S+VRIVTQ DI +A  AEDS FQP+LKPYQLVGVNFLL LY+K I GAILA
Sbjct: 178  CDRYSEVETSTVRIVTQTDIDEACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILA 237

Query: 750  DEMGLGKTIQAITYLTLLNHLEHDPGPHLIVCPASVLENWERELKKWCPTFNVLQYHGAA 571
            DEMGLGKTIQAITYLTLLNHL +DPGPHLIVCPASVLENWEREL+KWCP+F VLQYHGAA
Sbjct: 238  DEMGLGKTIQAITYLTLLNHLNNDPGPHLIVCPASVLENWERELRKWCPSFTVLQYHGAA 297

Query: 570  RSVYSKELSSIAKNGSATPFNVILVCYSLFERH------SAQQKDDRKILKRWR*SCLLM 409
            R+ YS+EL+S++K G   PFNV+LVCYSLFERH      S QQKDDRK+LKRWR SC+LM
Sbjct: 298  RAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHRCWSFYSEQQKDDRKVLKRWRWSCVLM 357

Query: 408  DEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDLFETGDVD 229
            DEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPD+F T +VD
Sbjct: 358  DEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVD 417

Query: 228  LKKLLNAEDRDLITRMKSILGPFILRRLKSDVMQQLVPKIQKVEYVRMEKQQVDAYKEAI 49
            LKKLLNAED +LITRMKSILGPFILRRLKSDVMQQLVPKIQ+VEYV MEK+Q D YKEAI
Sbjct: 418  LKKLLNAEDTELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVNMEKKQEDTYKEAI 477

Query: 48   EEYRAASHARISKSS 4
            EEYRAAS AR+ K S
Sbjct: 478  EEYRAASQARLLKLS 492


>ref|XP_003529186.1| PREDICTED: helicase swr1-like [Glycine max]
          Length = 754

 Score =  521 bits (1342), Expect = e-146
 Identities = 261/313 (83%), Positives = 281/313 (89%), Gaps = 1/313 (0%)
 Frame = -3

Query: 939  GVACDRYAEVESSSVRIVTQDDIYKA-SMAEDSGFQPLLKPYQLVGVNFLLFLYRKRIAG 763
            G AC+RY+EVESSSVRIVTQ+D+  A    EDSGF+PLLKPYQLVGVNFLL LYRK I G
Sbjct: 167  GTACERYSEVESSSVRIVTQEDVDVARGSEEDSGFKPLLKPYQLVGVNFLLLLYRKGIGG 226

Query: 762  AILADEMGLGKTIQAITYLTLLNHLEHDPGPHLIVCPASVLENWERELKKWCPTFNVLQY 583
            AILADEMGLGKT+QAITYLTLL HL +D GPHLIVCPASVLENWERELK+WCP+F+VLQY
Sbjct: 227  AILADEMGLGKTVQAITYLTLLKHLHNDSGPHLIVCPASVLENWERELKRWCPSFSVLQY 286

Query: 582  HGAARSVYSKELSSIAKNGSATPFNVILVCYSLFERHSAQQKDDRKILKRWR*SCLLMDE 403
            HGA R+ Y KEL+S++K G   PFNV+LVCYSLFERHSAQQKDDRKILKRWR SC+LMDE
Sbjct: 287  HGAGRAAYCKELNSLSKAGLPPPFNVLLVCYSLFERHSAQQKDDRKILKRWRWSCVLMDE 346

Query: 402  AHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDLFETGDVDLK 223
            AHALKDKNS+RWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPD+F T DVDLK
Sbjct: 347  AHALKDKNSFRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFATEDVDLK 406

Query: 222  KLLNAEDRDLITRMKSILGPFILRRLKSDVMQQLVPKIQKVEYVRMEKQQVDAYKEAIEE 43
            KLLNAED DLI RMKSILGPFILRRLKSDVMQQLVPKIQ+VEYV MEKQQ  AYKEAIEE
Sbjct: 407  KLLNAEDGDLIGRMKSILGPFILRRLKSDVMQQLVPKIQQVEYVIMEKQQETAYKEAIEE 466

Query: 42   YRAASHARISKSS 4
            YRA S AR+ K S
Sbjct: 467  YRAVSQARMEKCS 479


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