BLASTX nr result
ID: Panax21_contig00021456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00021456
(1701 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 732 0.0
emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera] 725 0.0
ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus ... 702 0.0
ref|XP_002316041.1| predicted protein [Populus trichocarpa] gi|2... 693 0.0
ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 691 0.0
>ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Vitis
vinifera] gi|296083248|emb|CBI22884.3| unnamed protein
product [Vitis vinifera]
Length = 651
Score = 732 bits (1889), Expect = 0.0
Identities = 356/447 (79%), Positives = 393/447 (87%), Gaps = 5/447 (1%)
Frame = -1
Query: 1701 KCVYYWPEDGRSYVALGKILGKQSKANEARAVYEKGCQATQGENPYIWQCWAVLENKMGN 1522
KC+YYWPEDGR YVALGKIL KQSK +EARAVYEKGCQATQGENPYIWQCWAVLENKMGN
Sbjct: 170 KCIYYWPEDGRPYVALGKILSKQSKTSEARAVYEKGCQATQGENPYIWQCWAVLENKMGN 229
Query: 1521 IRKARDLFDAATVADKKHVAAWHGWAVLELKTGNIKKARNLLAKGLKYCGKNEYIYQTLA 1342
IR+ARDLFDAATVADK+HVAAWHGWAVLELK GNIKKAR+LLAKGLKY G NEYIYQTLA
Sbjct: 230 IRRARDLFDAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTLA 289
Query: 1341 MLEAKANRFEQARYLFRQATKCNPKSCASWLAWAQLEAQQDNNAVARQIFEKAVQASPKN 1162
+LEAKANR EQARYLF+QATKCNPKSCASWLAWAQLE QQ+NN ARQ+FEKAVQASPKN
Sbjct: 290 LLEAKANRHEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQASPKN 349
Query: 1161 RFAWHVWGVFEAKLGNIDQGRKLLKIGNALNPRDPVLLQSLALLEYKNSTANLARVLFRR 982
RFAWHVWGVFEA LGN D GRKLLKIG+A+NPRDPVLLQSLALLEYK STANL+RVLFRR
Sbjct: 350 RFAWHVWGVFEANLGNADVGRKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRR 409
Query: 981 ASELDPRHQPVWIAWGWMEWKEGNIATARELYQRALSINSASESAARCLQAWGVLEQRAG 802
ASELDPRHQPVWIAWGWMEWKEGNIATARE+YQRALSI+S +ESAARCLQAWGVLE+RAG
Sbjct: 410 ASELDPRHQPVWIAWGWMEWKEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAG 469
Query: 801 NXXXXXXXXXXXXSINSQSYVTWMTWASLEEDQGNAIRAEEIRDLYFQQRIEIVDDASWV 622
N +INSQSY+TWMTWAS EE+QGNA+RAEEIRDLYFQQR E+VDDASWV
Sbjct: 470 NLSAARRLFRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQRTEVVDDASWV 529
Query: 621 MGVFDIIDPAIDSIKRLLNIDQNTYYKV-NSSNESGGIKEES----VGASTEFIDGKNTE 457
MG DIIDPA+DSIKRLLN+DQN+YY++ +SS G E+S G S+ D K+T
Sbjct: 530 MGFLDIIDPALDSIKRLLNLDQNSYYRIPDSSRNIPGANEDSSGPGPGPSSGNPDSKDTA 589
Query: 456 NGSGFNLDAFIQGKLFVDPSKLDIMLE 376
+ +GFNLDAFI+ KL +DPS LD+ ++
Sbjct: 590 SENGFNLDAFIREKLSLDPSNLDVQMQ 616
>emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]
Length = 629
Score = 725 bits (1872), Expect = 0.0
Identities = 354/444 (79%), Positives = 389/444 (87%), Gaps = 5/444 (1%)
Frame = -1
Query: 1701 KCVYYWPEDGRSYVALGKILGKQSKANEARAVYEKGCQATQGENPYIWQCWAVLENKMGN 1522
KC+YYWPEDGR YVALGKIL KQSK +EARAVYEKGCQATQGENPYIWQCWAVLENKMGN
Sbjct: 170 KCIYYWPEDGRPYVALGKILSKQSKTSEARAVYEKGCQATQGENPYIWQCWAVLENKMGN 229
Query: 1521 IRKARDLFDAATVADKKHVAAWHGWAVLELKTGNIKKARNLLAKGLKYCGKNEYIYQTLA 1342
IR+ARDLFDAATVADK+HVAAWHGWAVLELK GNIKKAR+LLAKGLKY G NEYIYQTL
Sbjct: 230 IRRARDLFDAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTLX 289
Query: 1341 MLEAKANRFEQARYLFRQATKCNPKSCASWLAWAQLEAQQDNNAVARQIFEKAVQASPKN 1162
+LEAKANR EQARYLF+QATKCNPKSCASWLAWAQLE QQ+NN ARQ+FEKAVQASPKN
Sbjct: 290 LLEAKANRHEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQASPKN 349
Query: 1161 RFAWHVWGVFEAKLGNIDQGRKLLKIGNALNPRDPVLLQSLALLEYKNSTANLARVLFRR 982
RFAWHVWGVFEA LGN D GRKLLKIG+A+NPRDPVLLQSLALLEYK STANL+RVLFRR
Sbjct: 350 RFAWHVWGVFEANLGNADVGRKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRR 409
Query: 981 ASELDPRHQPVWIAWGWMEWKEGNIATARELYQRALSINSASESAARCLQAWGVLEQRAG 802
ASELDPRHQPVWIAWGWMEWKEGNIATARE+YQRALSI+S +ESAARCLQAWGVLE+RAG
Sbjct: 410 ASELDPRHQPVWIAWGWMEWKEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAG 469
Query: 801 NXXXXXXXXXXXXSINSQSYVTWMTWASLEEDQGNAIRAEEIRDLYFQQRIEIVDDASWV 622
N +INSQSY+TWMTWAS EE+QGNA+RAEEIRDLYFQQR E+VDDASWV
Sbjct: 470 NLSAARRLFRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQRTEVVDDASWV 529
Query: 621 MGVFDIIDPAIDSIKRLLNIDQNTYYKV-NSSNESGGIKEES----VGASTEFIDGKNTE 457
MG DIIDPA+DSIKRLLN+DQN+YY++ +SS G E+S G S+ D +T
Sbjct: 530 MGFLDIIDPALDSIKRLLNLDQNSYYRIPDSSRNIPGADEDSSGPGPGPSSGNPDSNDTA 589
Query: 456 NGSGFNLDAFIQGKLFVDPSKLDI 385
+ +GFNLDAFI+ KL +DPS LD+
Sbjct: 590 SENGFNLDAFIREKLSLDPSNLDM 613
>ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus communis]
gi|223541537|gb|EEF43086.1| pre-mRNA splicing factor,
putative [Ricinus communis]
Length = 648
Score = 702 bits (1811), Expect = 0.0
Identities = 337/442 (76%), Positives = 380/442 (85%)
Frame = -1
Query: 1701 KCVYYWPEDGRSYVALGKILGKQSKANEARAVYEKGCQATQGENPYIWQCWAVLENKMGN 1522
KC+ YW EDGR+YVALGKIL KQSK EARAVYEKGCQATQGEN YIWQCWAVLENKMGN
Sbjct: 181 KCINYWSEDGRAYVALGKILTKQSKTAEARAVYEKGCQATQGENAYIWQCWAVLENKMGN 240
Query: 1521 IRKARDLFDAATVADKKHVAAWHGWAVLELKTGNIKKARNLLAKGLKYCGKNEYIYQTLA 1342
IR+AR+LFDAATVADK+H+AAWHGWAVLELK GNIKKAR LLAKG+K+CG NEYIYQTLA
Sbjct: 241 IRRARELFDAATVADKRHIAAWHGWAVLELKQGNIKKARQLLAKGIKFCGGNEYIYQTLA 300
Query: 1341 MLEAKANRFEQARYLFRQATKCNPKSCASWLAWAQLEAQQDNNAVARQIFEKAVQASPKN 1162
+LEAKANR+EQARYLFRQATKCNPKSCASWLAWAQ+E QQ+NN AR++F+KAVQASPKN
Sbjct: 301 LLEAKANRYEQARYLFRQATKCNPKSCASWLAWAQVEVQQENNLTARELFQKAVQASPKN 360
Query: 1161 RFAWHVWGVFEAKLGNIDQGRKLLKIGNALNPRDPVLLQSLALLEYKNSTANLARVLFRR 982
RFAWHVWGVFEA +GNI+ RKLLKIG+ LNPRDPVLLQSLALLEYK+STANLARVLFRR
Sbjct: 361 RFAWHVWGVFEANIGNIEMARKLLKIGHTLNPRDPVLLQSLALLEYKHSTANLARVLFRR 420
Query: 981 ASELDPRHQPVWIAWGWMEWKEGNIATARELYQRALSINSASESAARCLQAWGVLEQRAG 802
ASELDP+HQPVWIAWGWMEWKEGNI+ ARELYQRALSI+S+SESAA+CLQAWGVLEQR G
Sbjct: 421 ASELDPKHQPVWIAWGWMEWKEGNISAARELYQRALSIDSSSESAAKCLQAWGVLEQRVG 480
Query: 801 NXXXXXXXXXXXXSINSQSYVTWMTWASLEEDQGNAIRAEEIRDLYFQQRIEIVDDASWV 622
N +INSQSY+TWMTWA EEDQGN++RAEEIR+LYFQQR E+VDDASWV
Sbjct: 481 NLSLARRLFRSSLNINSQSYITWMTWAQFEEDQGNSVRAEEIRNLYFQQRTEVVDDASWV 540
Query: 621 MGVFDIIDPAIDSIKRLLNIDQNTYYKVNSSNESGGIKEESVGASTEFIDGKNTENGSGF 442
MGV DIIDPA+DSIKRLL DQN + SS+ G E + + DG T + SGF
Sbjct: 541 MGVLDIIDPALDSIKRLLKFDQNK--EQESSSSKPGKYEANANVPSSNADGNLTRSRSGF 598
Query: 441 NLDAFIQGKLFVDPSKLDIMLE 376
+LD+FI+ +L +D SK+D+ LE
Sbjct: 599 DLDSFIKERLSLDQSKVDVQLE 620
>ref|XP_002316041.1| predicted protein [Populus trichocarpa] gi|222865081|gb|EEF02212.1|
predicted protein [Populus trichocarpa]
Length = 546
Score = 693 bits (1788), Expect = 0.0
Identities = 330/449 (73%), Positives = 382/449 (85%), Gaps = 7/449 (1%)
Frame = -1
Query: 1701 KCVYYWPEDGRSYVALGKILGKQSKANEARAVYEKGCQATQGENPYIWQCWAVLENKMGN 1522
KC+ YWPEDG+ YVALG+ILGKQSK ARAVYEKGCQATQGENPY+WQCWAVLENKMGN
Sbjct: 97 KCISYWPEDGKPYVALGRILGKQSKTEAARAVYEKGCQATQGENPYVWQCWAVLENKMGN 156
Query: 1521 IRKARDLFDAATVADKKHVAAWHGWAVLELKTGNIKKARNLLAKGLKYCGKNEYIYQTLA 1342
IR+AR+LFDAATVADK+HVAAWHGWA+LELK GN+KKAR LLAKGLK+CG NEY+YQTLA
Sbjct: 157 IRRARELFDAATVADKRHVAAWHGWAILELKQGNVKKARQLLAKGLKFCGGNEYVYQTLA 216
Query: 1341 MLEAKANRFEQARYLFRQATKCNPKSCASWLAWAQLEAQQDNNAVARQIFEKAVQASPKN 1162
+LEAKANR++QA+YLFRQATKCNPKSCASWLAWAQLE QQ+NN VAR++FEKAVQASPKN
Sbjct: 217 LLEAKANRYKQAQYLFRQATKCNPKSCASWLAWAQLETQQENNLVARKLFEKAVQASPKN 276
Query: 1161 RFAWHVWGVFEAKLGNIDQGRKLLKIGNALNPRDPVLLQSLALLEYKNSTANLARVLFRR 982
RFAWHVWGVFEA +GNI++ RKLL IG+ALNPRD VLLQSLALLEY++STANLARVLFR+
Sbjct: 277 RFAWHVWGVFEANIGNIEKARKLLTIGHALNPRDAVLLQSLALLEYRHSTANLARVLFRK 336
Query: 981 ASELDPRHQPVWIAWGWMEWKEGNIATARELYQRALSINSASESAARCLQAWGVLEQRAG 802
ASELDPRHQPVWIAWGWMEWKEGNI+TARELYQ+ALSIN+ +ESAARCLQAWGVLEQRAG
Sbjct: 337 ASELDPRHQPVWIAWGWMEWKEGNISTARELYQKALSINTTTESAARCLQAWGVLEQRAG 396
Query: 801 NXXXXXXXXXXXXSINSQSYVTWMTWASLEEDQGNAIRAEEIRDLYFQQRIEIVDDASWV 622
N +INSQSYVTWMTWA LE+DQGN++RAEEIR+LYFQQR E+VDD WV
Sbjct: 397 NLSAARRLFRSSLNINSQSYVTWMTWAQLEDDQGNSVRAEEIRNLYFQQRTEVVDDVPWV 456
Query: 621 MGVFDIIDPAIDSIKRLLNIDQNTYYKVN------SSNESGGIKEESVGASTEFIDGKNT 460
G DI+DPA+DSIK+LLN+DQ+ Y K S + G+ + S G + G +
Sbjct: 457 AGFLDILDPAVDSIKKLLNMDQDPYKKAQEALRNISRGKEKGVDDNSAGNPSSNSFGNDK 516
Query: 459 E-NGSGFNLDAFIQGKLFVDPSKLDIMLE 376
E GSG +LD+FI+ +L +D +K D+ LE
Sbjct: 517 EGRGSGLDLDSFIKERLSLDATKFDVNLE 545
>ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
[Cucumis sativus]
Length = 636
Score = 691 bits (1784), Expect = 0.0
Identities = 335/448 (74%), Positives = 381/448 (85%), Gaps = 1/448 (0%)
Frame = -1
Query: 1701 KCVYYWPEDGRSYVALGKILGKQSKANEARAVYEKGCQATQGENPYIWQCWAVLENKMGN 1522
KC+ WPEDGR+YVALGK+LGKQ KA EA+AVYE+GCQATQGEN YIWQCWAVLE++MGN
Sbjct: 161 KCINKWPEDGRAYVALGKMLGKQMKAAEAKAVYERGCQATQGENSYIWQCWAVLESRMGN 220
Query: 1521 IRKARDLFDAATVADKKHVAAWHGWAVLELKTGNIKKARNLLAKGLKYCGKNEYIYQTLA 1342
IRKAR+LFDAATVA+KKH+AAWHGWAVLELK GNIKKARNLLAKGLKYCG NEYIYQTLA
Sbjct: 221 IRKARELFDAATVANKKHIAAWHGWAVLELKQGNIKKARNLLAKGLKYCGGNEYIYQTLA 280
Query: 1341 MLEAKANRFEQARYLFRQATKCNPKSCASWLAWAQLEAQQDNNAVARQIFEKAVQASPKN 1162
+LEAK+NR+EQARYLF+QATKCNPKSCASWLAWAQLE Q +NN +AR++FEKA+QASPKN
Sbjct: 281 LLEAKSNRYEQARYLFKQATKCNPKSCASWLAWAQLEMQLENNLLARELFEKAIQASPKN 340
Query: 1161 RFAWHVWGVFEAKLGNIDQGRKLLKIGNALNPRDPVLLQSLALLEYKNSTANLARVLFRR 982
RFAWH+WG+FEA GNI++G KLLKIG+ LNPRDPVLLQSL LLEYKNS+A+LARVLFRR
Sbjct: 341 RFAWHIWGLFEANTGNIEKGMKLLKIGHVLNPRDPVLLQSLGLLEYKNSSASLARVLFRR 400
Query: 981 ASELDPRHQPVWIAWGWMEWKEGNIATARELYQRALSINSASESAARCLQAWGVLEQRAG 802
ASELDP+HQPVWIAWGWMEWKEGNI ARELYQRAL I+S SESAARCLQAWGVLEQRAG
Sbjct: 401 ASELDPKHQPVWIAWGWMEWKEGNIVKARELYQRALLIDSDSESAARCLQAWGVLEQRAG 460
Query: 801 NXXXXXXXXXXXXSINSQSYVTWMTWASLEEDQGNAIRAEEIRDLYFQQRIEIVDDASWV 622
N +INSQSYVTWMTWA+LEEDQGNAIRAEEIR+LYFQQR E+VDDASWV
Sbjct: 461 NLSAARRLYRSSLNINSQSYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDDASWV 520
Query: 621 MGVFDIIDPAIDSIKRLLNIDQNTYYKVNSSNESGGIKEESVGASTEFIDGKNT-ENGSG 445
MG D+IDPA+DSIKRLL ++Q+ + S GG + S+ S N E+ +G
Sbjct: 521 MGFLDVIDPALDSIKRLLKLEQDPF--TASRTADGGPRNTSIDDSAASSSSNNVGESETG 578
Query: 444 FNLDAFIQGKLFVDPSKLDIMLERTFQK 361
F+LDAFI KL +D SKL+I +E T K
Sbjct: 579 FDLDAFIMKKLSIDTSKLEIQMETTRPK 606