BLASTX nr result
ID: Panax21_contig00021443
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00021443 (646 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi... 303 2e-80 ref|XP_002300622.1| chromatin remodeling complex subunit [Populu... 297 1e-78 ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 295 5e-78 ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 295 5e-78 ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 282 4e-74 >ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera] gi|297745602|emb|CBI40767.3| unnamed protein product [Vitis vinifera] Length = 492 Score = 303 bits (775), Expect = 2e-80 Identities = 139/214 (64%), Positives = 166/214 (77%) Frame = -1 Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464 SYSRWFSW+N+HECEV+FLPEFF+ RS SKNPRVYKYYRNSII FR+NP+RK+TFT+ R Sbjct: 62 SYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKLTFTDVR 121 Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284 K ++GDVGS+RRVFDFLEAW LINY GS +PLKWE+K+ Sbjct: 122 KILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKS-----------GGASSH 170 Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104 D+G + K+R CS CKS+CSIACFACDK D+TLCARC+VRG+Y+VGVN SDFRR Sbjct: 171 TGDAGGGAVESIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVNSSDFRR 230 Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2 VEIS++ K WTDKETLHLLEA++HY DDWK+VA Sbjct: 231 VEISEDTKAGWTDKETLHLLEAVLHYGDDWKKVA 264 >ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222842348|gb|EEE79895.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 500 Score = 297 bits (760), Expect = 1e-78 Identities = 141/214 (65%), Positives = 166/214 (77%) Frame = -1 Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464 SYSRWFSW NIHECEV+FLPEFF+ RS SKNP VYKYYRNSII +FR+NP+ K+TFTE R Sbjct: 54 SYSRWFSWDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIR 113 Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284 KT++GDVGS+RRVFDFL+AW LINY SP +K LKWED + S Sbjct: 114 KTLVGDVGSIRRVFDFLDAWGLINY--SPLNKQLKWEDGKDSSSKTAASPAGGGGGDGGT 171 Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104 D+ A+ KRLCS CKS+CSIACF CDK D+TLCARC+VRG+Y+VGV+ SDFRR Sbjct: 172 AGDANASNTK-DNCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRR 230 Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2 VEIS+E +TDWT+KETL LLEA+MHYRDDWK+VA Sbjct: 231 VEISEEARTDWTEKETLQLLEAVMHYRDDWKKVA 264 >ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus] Length = 555 Score = 295 bits (755), Expect = 5e-78 Identities = 137/214 (64%), Positives = 166/214 (77%) Frame = -1 Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464 SYSRWFSW+ IHECEV+FLPEFF+ RS SKNPRVYKY RNSI++ FRE P++KITFT+ R Sbjct: 133 SYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIR 192 Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284 KT++ DVGS+RRVFDFLEAW LINY S SKPLKW+D+++ Sbjct: 193 KTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKS-------NASASNTGEP 245 Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104 S ++A KR+CS CKS+CSIACFACDK D+TLCARC+VRG+Y+VGV+ SDFRR Sbjct: 246 GGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRR 305 Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2 VEI+D+ +TDWTDKETLHLLEA+ HY DDWK+VA Sbjct: 306 VEINDDTRTDWTDKETLHLLEALTHYGDDWKKVA 339 >ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus] Length = 493 Score = 295 bits (755), Expect = 5e-78 Identities = 137/214 (64%), Positives = 166/214 (77%) Frame = -1 Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464 SYSRWFSW+ IHECEV+FLPEFF+ RS SKNPRVYKY RNSI++ FRE P++KITFT+ R Sbjct: 71 SYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIR 130 Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284 KT++ DVGS+RRVFDFLEAW LINY S SKPLKW+D+++ Sbjct: 131 KTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKS-------NASASNTGEP 183 Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104 S ++A KR+CS CKS+CSIACFACDK D+TLCARC+VRG+Y+VGV+ SDFRR Sbjct: 184 GGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRR 243 Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2 VEI+D+ +TDWTDKETLHLLEA+ HY DDWK+VA Sbjct: 244 VEINDDTRTDWTDKETLHLLEALTHYGDDWKKVA 277 >ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max] Length = 491 Score = 282 bits (721), Expect = 4e-74 Identities = 141/221 (63%), Positives = 164/221 (74%), Gaps = 7/221 (3%) Frame = -1 Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464 SYSRWFSW +I ECEV+ LPEFFE SASK+PRVYKYYRNSI++ FR NP RKITFT+ R Sbjct: 57 SYSRWFSWDSIDECEVRHLPEFFE--SASKSPRVYKYYRNSIVKYFRYNPTRKITFTDVR 114 Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPS-SKPLKWEDKETSKXXXXXXXXXXXXXXXX 287 KT++GDVGS+RRVFDFLE W LINY S S +KPLKW+DKET Sbjct: 115 KTLVGDVGSIRRVFDFLETWGLINYHPSSSLTKPLKWDDKETKS---------------- 158 Query: 286 XXNDSGATTADFTGK------KRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGV 125 DS + T + + KRLCS CK VC+IACFACDK D+TLCARC+VRG+Y+VGV Sbjct: 159 ---DSASNTTESSSAPAKENTKRLCSGCKVVCTIACFACDKYDLTLCARCYVRGNYRVGV 215 Query: 124 NPSDFRRVEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2 N SDFRRVEIS+E KTDW +KET +LLEAI HY DDWKRV+ Sbjct: 216 NSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDWKRVS 256