BLASTX nr result

ID: Panax21_contig00021443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021443
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   303   2e-80
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   297   1e-78
ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   295   5e-78
ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   295   5e-78
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   282   4e-74

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
           gi|297745602|emb|CBI40767.3| unnamed protein product
           [Vitis vinifera]
          Length = 492

 Score =  303 bits (775), Expect = 2e-80
 Identities = 139/214 (64%), Positives = 166/214 (77%)
 Frame = -1

Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464
           SYSRWFSW+N+HECEV+FLPEFF+ RS SKNPRVYKYYRNSII  FR+NP+RK+TFT+ R
Sbjct: 62  SYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKLTFTDVR 121

Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284
           K ++GDVGS+RRVFDFLEAW LINY GS   +PLKWE+K+                    
Sbjct: 122 KILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKS-----------GGASSH 170

Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104
             D+G    +   K+R CS CKS+CSIACFACDK D+TLCARC+VRG+Y+VGVN SDFRR
Sbjct: 171 TGDAGGGAVESIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVNSSDFRR 230

Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2
           VEIS++ K  WTDKETLHLLEA++HY DDWK+VA
Sbjct: 231 VEISEDTKAGWTDKETLHLLEAVLHYGDDWKKVA 264


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222842348|gb|EEE79895.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 500

 Score =  297 bits (760), Expect = 1e-78
 Identities = 141/214 (65%), Positives = 166/214 (77%)
 Frame = -1

Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464
           SYSRWFSW NIHECEV+FLPEFF+ RS SKNP VYKYYRNSII +FR+NP+ K+TFTE R
Sbjct: 54  SYSRWFSWDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIR 113

Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284
           KT++GDVGS+RRVFDFL+AW LINY  SP +K LKWED + S                  
Sbjct: 114 KTLVGDVGSIRRVFDFLDAWGLINY--SPLNKQLKWEDGKDSSSKTAASPAGGGGGDGGT 171

Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104
             D+ A+       KRLCS CKS+CSIACF CDK D+TLCARC+VRG+Y+VGV+ SDFRR
Sbjct: 172 AGDANASNTK-DNCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRR 230

Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2
           VEIS+E +TDWT+KETL LLEA+MHYRDDWK+VA
Sbjct: 231 VEISEEARTDWTEKETLQLLEAVMHYRDDWKKVA 264


>ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 555

 Score =  295 bits (755), Expect = 5e-78
 Identities = 137/214 (64%), Positives = 166/214 (77%)
 Frame = -1

Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464
           SYSRWFSW+ IHECEV+FLPEFF+ RS SKNPRVYKY RNSI++ FRE P++KITFT+ R
Sbjct: 133 SYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIR 192

Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284
           KT++ DVGS+RRVFDFLEAW LINY  S  SKPLKW+D+++                   
Sbjct: 193 KTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKS-------NASASNTGEP 245

Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104
              S  ++A     KR+CS CKS+CSIACFACDK D+TLCARC+VRG+Y+VGV+ SDFRR
Sbjct: 246 GGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRR 305

Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2
           VEI+D+ +TDWTDKETLHLLEA+ HY DDWK+VA
Sbjct: 306 VEINDDTRTDWTDKETLHLLEALTHYGDDWKKVA 339


>ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 493

 Score =  295 bits (755), Expect = 5e-78
 Identities = 137/214 (64%), Positives = 166/214 (77%)
 Frame = -1

Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464
           SYSRWFSW+ IHECEV+FLPEFF+ RS SKNPRVYKY RNSI++ FRE P++KITFT+ R
Sbjct: 71  SYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIR 130

Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPSSKPLKWEDKETSKXXXXXXXXXXXXXXXXX 284
           KT++ DVGS+RRVFDFLEAW LINY  S  SKPLKW+D+++                   
Sbjct: 131 KTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKS-------NASASNTGEP 183

Query: 283 XNDSGATTADFTGKKRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGVNPSDFRR 104
              S  ++A     KR+CS CKS+CSIACFACDK D+TLCARC+VRG+Y+VGV+ SDFRR
Sbjct: 184 GGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRR 243

Query: 103 VEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2
           VEI+D+ +TDWTDKETLHLLEA+ HY DDWK+VA
Sbjct: 244 VEINDDTRTDWTDKETLHLLEALTHYGDDWKKVA 277


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  282 bits (721), Expect = 4e-74
 Identities = 141/221 (63%), Positives = 164/221 (74%), Gaps = 7/221 (3%)
 Frame = -1

Query: 643 SYSRWFSWSNIHECEVKFLPEFFEGRSASKNPRVYKYYRNSIIRRFRENPNRKITFTEAR 464
           SYSRWFSW +I ECEV+ LPEFFE  SASK+PRVYKYYRNSI++ FR NP RKITFT+ R
Sbjct: 57  SYSRWFSWDSIDECEVRHLPEFFE--SASKSPRVYKYYRNSIVKYFRYNPTRKITFTDVR 114

Query: 463 KTVIGDVGSVRRVFDFLEAWSLINYLGSPS-SKPLKWEDKETSKXXXXXXXXXXXXXXXX 287
           KT++GDVGS+RRVFDFLE W LINY  S S +KPLKW+DKET                  
Sbjct: 115 KTLVGDVGSIRRVFDFLETWGLINYHPSSSLTKPLKWDDKETKS---------------- 158

Query: 286 XXNDSGATTADFTGK------KRLCSICKSVCSIACFACDKDDVTLCARCFVRGSYKVGV 125
              DS + T + +        KRLCS CK VC+IACFACDK D+TLCARC+VRG+Y+VGV
Sbjct: 159 ---DSASNTTESSSAPAKENTKRLCSGCKVVCTIACFACDKYDLTLCARCYVRGNYRVGV 215

Query: 124 NPSDFRRVEISDEVKTDWTDKETLHLLEAIMHYRDDWKRVA 2
           N SDFRRVEIS+E KTDW +KET +LLEAI HY DDWKRV+
Sbjct: 216 NSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDWKRVS 256


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