BLASTX nr result

ID: Panax21_contig00021439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021439
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycope...   261   3e-68
ref|XP_004139306.1| PREDICTED: EIN3-binding F-box protein 1-like...   256   2e-66
gb|AFZ84556.1| f-box transcription factor, partial [Populus trem...   251   6e-65
gb|AFZ84553.1| f-box transcription factor, partial [Populus tric...   251   6e-65
gb|AEX34712.2| f-box transcription factor, partial [Populus bals...   251   6e-65

>ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|82734614|gb|ABB89717.1| EIN3-binding F-box protein 1
           [Solanum lycopersicum] gi|83584402|gb|ABC24971.1|
           EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|240017777|gb|ACS44350.1| EIN3-binding F-box protein 2
           [Solanum lycopersicum]
          Length = 637

 Score =  261 bits (668), Expect = 3e-68
 Identities = 126/175 (72%), Positives = 150/175 (85%)
 Frame = -3

Query: 527 CRSKTTQTGTEVSESTNDIEMISADENQEGECDGYLTRCLEGKKVTNLRLAAIAVGTATR 348
           CRSK+         + ND  MIS DE+ E ECDGYLTRC+EGKK T++RLAAIAVGT+TR
Sbjct: 104 CRSKSYN-------NLNDAIMISKDEDLEVECDGYLTRCVEGKKATDIRLAAIAVGTSTR 156

Query: 347 GGLGKLSIRGNNSTRGVTDLGLSAIAHGCPSLRVLSLWNVPSIGDEGLLKIAKECHLLEK 168
           GGLGKLSIRG+NS RG+T++GLSA+AHGCPSLRVLSLWNVPSIGDEGLL++A+ECH LEK
Sbjct: 157 GGLGKLSIRGSNSVRGITNVGLSAVAHGCPSLRVLSLWNVPSIGDEGLLEVARECHSLEK 216

Query: 167 LDLCQCPSISNKGVIAVAQNCPNLTALTIESCSKIGNESLQAIGRYCPKLQSITI 3
           LDL  C SISNKG++A+A+NCP+LT+LTIESC  IGNE LQA+G+YC KLQS+TI
Sbjct: 217 LDLSHCRSISNKGLVAIAENCPSLTSLTIESCPNIGNEGLQAVGKYCTKLQSLTI 271



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 36/170 (21%)
 Frame = -3

Query: 404 GKKVTNLRLAAI---------AVGTATRGGLGKLSIRGNNSTRGVTDLGLSAIAHGCPSL 252
           GK +T+L L ++          +G A   GL  L        +G TD+GL A+  GCP+L
Sbjct: 315 GKLITSLNLCSLRNVSQKGFWVMGNAQ--GLQSLVSLTITLCQGATDVGLEAVGKGCPNL 372

Query: 251 RVLSLWNVPSIGDEGLLKIAKECHLLEKLDLCQCPSISNKGVIAVAQN------------ 108
           + + +     + D GL+  AKE   LE L L +C  I+  G++    N            
Sbjct: 373 KYMCIRKCCFVSDGGLVAFAKEAGSLESLILEECNRITQVGILNAVSNCRKLKSLSLVKC 432

Query: 107 ---------------CPNLTALTIESCSKIGNESLQAIGRYCPKLQSITI 3
                          C +L +L+I SC   G+ SL  +G+ CPKL  + +
Sbjct: 433 MGIKDLALQTSMLSPCESLRSLSIRSCPGFGSSSLAMVGKLCPKLHQLDL 482



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
 Frame = -3

Query: 341 LGKLSIRGNNSTRGVTDLGLSAIAHGCPSLRVLSLWNVPSIGDEGLLKIAKECHLLEKLD 162
           L  LSIR   S  G     L+ +   CP L  L L  +  I D GLL + + C  L K++
Sbjct: 451 LRSLSIR---SCPGFGSSSLAMVGKLCPKLHQLDLSGLCGITDAGLLPLLENCEGLVKVN 507

Query: 161 LCQCPSISNKGVIAVA-QNCPNLTALTIESCSKIGNESLQAIGRYCPKLQSITI 3
           L  C +++++ V+++A ++   L  L ++ C K+ + SL AI  YCP L  + +
Sbjct: 508 LSDCLNLTDQVVLSLAMRHGETLELLNLDGCRKVTDASLVAIADYCPLLIDLDV 561


>ref|XP_004139306.1| PREDICTED: EIN3-binding F-box protein 1-like [Cucumis sativus]
           gi|449525455|ref|XP_004169733.1| PREDICTED: EIN3-binding
           F-box protein 1-like [Cucumis sativus]
          Length = 661

 Score =  256 bits (653), Expect = 2e-66
 Identities = 124/183 (67%), Positives = 154/183 (84%), Gaps = 8/183 (4%)
 Frame = -3

Query: 527 CRSKTTQTGTEVSES--------TNDIEMISADENQEGECDGYLTRCLEGKKVTNLRLAA 372
           C+S++T     V  S        +++I +++ DE+QE E +G+LTRCLEGKK T++RLAA
Sbjct: 111 CKSRSTCISQMVESSNVEQQKTESDEISVVNCDEDQEDESNGFLTRCLEGKKATDVRLAA 170

Query: 371 IAVGTATRGGLGKLSIRGNNSTRGVTDLGLSAIAHGCPSLRVLSLWNVPSIGDEGLLKIA 192
           IAVGT+ RGGLGKLSIRG+NSTRGVT+LGLSAIAHGCPSLR+LSLWNVPS+GDEGL +IA
Sbjct: 171 IAVGTSGRGGLGKLSIRGSNSTRGVTNLGLSAIAHGCPSLRILSLWNVPSVGDEGLFEIA 230

Query: 191 KECHLLEKLDLCQCPSISNKGVIAVAQNCPNLTALTIESCSKIGNESLQAIGRYCPKLQS 12
           +ECHLLEKLDLC CPSIS+KG+IA+A+ C NLT+L+IESC KIGNE LQAIG+ C KLQ+
Sbjct: 231 RECHLLEKLDLCHCPSISDKGLIAIAEQCTNLTSLSIESCPKIGNEGLQAIGKLCSKLQT 290

Query: 11  ITI 3
           I+I
Sbjct: 291 ISI 293



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 37/171 (21%)
 Frame = -3

Query: 404 GKKVTNLRLAAI---------AVGTATRGGLGKLSIRGNNSTRGVTDLGLSAIAHGCPSL 252
           G+ +T+L L  +          +G+A   GL KL++    S RG+TD+ L A+  G  +L
Sbjct: 337 GQAITHLTLGGLQNVSEKGFWVMGSAQ--GLKKLTLLMIASCRGMTDVSLEAMGKGIANL 394

Query: 251 RVLSLWNVPSIGDEGLLKIAKECHLLEKLDLCQCPSISNKGVIAVAQN------------ 108
           + + +     + D GL+  AK    LE L L +C  I+  G+     N            
Sbjct: 395 KQMCIQKCCFVSDNGLIAFAKAAGSLEMLQLEECNRITLLGIGGALSNHIRNLKSLTVVK 454

Query: 107 ----------------CPNLTALTIESCSKIGNESLQAIGRYCPKLQSITI 3
                           C +L +L+I++C   G+ SL  +G+ CP+LQ + +
Sbjct: 455 CLGIKDIAQEVTLPSLCTSLRSLSIQNCPGFGSASLSMVGKLCPQLQHVEL 505


>gb|AFZ84556.1| f-box transcription factor, partial [Populus tremula]
          Length = 285

 Score =  251 bits (640), Expect = 6e-65
 Identities = 120/159 (75%), Positives = 140/159 (88%)
 Frame = -3

Query: 479 NDIEMISADENQEGECDGYLTRCLEGKKVTNLRLAAIAVGTATRGGLGKLSIRGNNSTRG 300
           ND+EM+S ++N E E DGYLTR LEGKK T++RLAAIAVGT++RGGLGKL IRG+NS RG
Sbjct: 3   NDVEMVSCEDNGEVESDGYLTRSLEGKKATDMRLAAIAVGTSSRGGLGKLLIRGSNSVRG 62

Query: 299 VTDLGLSAIAHGCPSLRVLSLWNVPSIGDEGLLKIAKECHLLEKLDLCQCPSISNKGVIA 120
           VT+ GLSAIA GCPSLR LSLWNVP +GDEGL +IAKECHLLEKLDL  CPSISNKG+IA
Sbjct: 63  VTNRGLSAIARGCPSLRALSLWNVPFVGDEGLFEIAKECHLLEKLDLSNCPSISNKGLIA 122

Query: 119 VAQNCPNLTALTIESCSKIGNESLQAIGRYCPKLQSITI 3
           +A+NCPNL++L IESCSKIGNE LQAIG+ CP+L SI+I
Sbjct: 123 IAENCPNLSSLNIESCSKIGNEGLQAIGKLCPRLHSISI 161


>gb|AFZ84553.1| f-box transcription factor, partial [Populus trichocarpa]
          Length = 285

 Score =  251 bits (640), Expect = 6e-65
 Identities = 120/159 (75%), Positives = 140/159 (88%)
 Frame = -3

Query: 479 NDIEMISADENQEGECDGYLTRCLEGKKVTNLRLAAIAVGTATRGGLGKLSIRGNNSTRG 300
           ND+EM+S ++N E E DGYLTR LEGKK T++RLAAIAVGT++RGGLGKL IRG+NS RG
Sbjct: 3   NDVEMVSCEDNGEVESDGYLTRSLEGKKATDMRLAAIAVGTSSRGGLGKLLIRGSNSVRG 62

Query: 299 VTDLGLSAIAHGCPSLRVLSLWNVPSIGDEGLLKIAKECHLLEKLDLCQCPSISNKGVIA 120
           VT+ GLSAIA GCPSLR LSLWNVP +GDEGL +IAKECHLLEKLDL  CPSISNKG+IA
Sbjct: 63  VTNRGLSAIARGCPSLRALSLWNVPFVGDEGLFEIAKECHLLEKLDLSNCPSISNKGLIA 122

Query: 119 VAQNCPNLTALTIESCSKIGNESLQAIGRYCPKLQSITI 3
           +A+NCPNL++L IESCSKIGNE LQAIG+ CP+L SI+I
Sbjct: 123 IAENCPNLSSLNIESCSKIGNEGLQAIGKLCPRLHSISI 161


>gb|AEX34712.2| f-box transcription factor, partial [Populus balsamifera]
          Length = 285

 Score =  251 bits (640), Expect = 6e-65
 Identities = 120/159 (75%), Positives = 140/159 (88%)
 Frame = -3

Query: 479 NDIEMISADENQEGECDGYLTRCLEGKKVTNLRLAAIAVGTATRGGLGKLSIRGNNSTRG 300
           ND+EM+S ++N E E DGYLTR LEGKK T++RLAAIAVGT++RGGLGKL IRG+NS RG
Sbjct: 3   NDVEMVSCEDNGEVESDGYLTRSLEGKKATDMRLAAIAVGTSSRGGLGKLLIRGSNSVRG 62

Query: 299 VTDLGLSAIAHGCPSLRVLSLWNVPSIGDEGLLKIAKECHLLEKLDLCQCPSISNKGVIA 120
           VT+ GLSAIA GCPSLR LSLWNVP +GDEGL +IAKECHLLEKLDL  CPSISNKG+IA
Sbjct: 63  VTNRGLSAIARGCPSLRALSLWNVPFVGDEGLFEIAKECHLLEKLDLSNCPSISNKGLIA 122

Query: 119 VAQNCPNLTALTIESCSKIGNESLQAIGRYCPKLQSITI 3
           +A+NCPNL++L IESCSKIGNE LQAIG+ CP+L SI+I
Sbjct: 123 IAENCPNLSSLNIESCSKIGNEGLQAIGKLCPRLHSISI 161


Top