BLASTX nr result

ID: Panax21_contig00021435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021435
         (1619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32261.3| unnamed protein product [Vitis vinifera]              262   1e-96
ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus c...   208   8e-86
ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   183   8e-77
ref|NP_001241399.1| zinc finger protein CONSTANS-LIKE 13-like [G...   180   7e-76
ref|XP_003625866.1| CONSTANS-like zinc finger protein [Medicago ...   172   6e-74

>emb|CBI32261.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  262 bits (669), Expect(2) = 1e-96
 Identities = 138/251 (54%), Positives = 174/251 (69%), Gaps = 4/251 (1%)
 Frame = +1

Query: 643  GEDDAG----FVGSENYRFSDYLIWDTPSVVSLDDLISSNGSDHNFQAMGVPPLPKNRNT 810
            G +D G    F G E+  FSD+L+WDTP+VV+LDDLI S   DHNFQAMGVPPLPKNR  
Sbjct: 95   GFEDLGKKSLFCGDES-EFSDFLVWDTPAVVNLDDLIVSTACDHNFQAMGVPPLPKNRGA 153

Query: 811  VCGQHKEEILCQLREMAKLEPNFDDDKQDLESSSGFRSLLPEQNCQQLDTYISFEHKAEP 990
             CGQHK EI+ QLR++AK+E +FD D  D +   GF+S +P+Q  Q+ +   S +H+ E 
Sbjct: 154  PCGQHKAEIIHQLRQLAKIELSFDFDHGDAKPPIGFQSHIPKQLIQKENECNSCDHEVE- 212

Query: 991  TFFPSLEARPLQWCSYTGEDADQGLPSTSLQNYFNTNCLVPDKDSEIGHCFCHENNGHEA 1170
              FP+ EA   QWCS   E A+Q LPS  L +  +  CLVP K S+IG    H N   E 
Sbjct: 213  FVFPTYEASAFQWCSDGSEAANQVLPSVLLGSCADEKCLVPRKHSDIGGSVSHTNGSDEG 272

Query: 1171 QSESPVITEAAQILPKVAPREFSIQDRNSAITRYKEKRKSRRYDKRIRYESRKVRAENRI 1350
            +SE PV+T+    LPKV+  E + Q+R+SAI+RYKEK+K+RRY+K IRYESRK RAE+RI
Sbjct: 273  KSECPVVTKTLPALPKVSVHELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRI 332

Query: 1351 RIKGRFAKMDH 1383
            RIKGRFAKMDH
Sbjct: 333  RIKGRFAKMDH 343



 Score =  119 bits (299), Expect(2) = 1e-96
 Identities = 55/83 (66%), Positives = 60/83 (72%)
 Frame = +3

Query: 333 IALLYCRADSAKLCFNCDRQVHSTNQLFTKHTRXXXXXXXXXXXXXIFCSTHSSVLCQNC 512
           +ALLYCRADSAKLC +CDR+VHSTNQLFTKHTR             I CST + VLCQNC
Sbjct: 1   MALLYCRADSAKLCLSCDREVHSTNQLFTKHTRSRLCDVCDASPASILCSTDNLVLCQNC 60

Query: 513 DWESHSLSLSPVHDRRPLEGFNG 581
           DW  H  SLS  HDRRPLEGF+G
Sbjct: 61  DWAKHGRSLSSAHDRRPLEGFSG 83


>ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus communis]
            gi|223540063|gb|EEF41640.1| hypothetical protein
            RCOM_0555710 [Ricinus communis]
          Length = 411

 Score =  208 bits (529), Expect(2) = 8e-86
 Identities = 122/263 (46%), Positives = 155/263 (58%), Gaps = 17/263 (6%)
 Frame = +1

Query: 643  GEDDAGFVGSENYRFSDYLIWDTPSVVSLDDLISSNGSDHNFQAMGVPPLPK-------- 798
            G D +GF       +SD LIW+TP+VVS+DDLI S+ S  NF A+GVPPLPK        
Sbjct: 153  GPDGSGFEDG----YSDLLIWETPAVVSIDDLIVSSDSGPNFPALGVPPLPKAIVFRFSL 208

Query: 799  --------NRNTVCGQHKEEILCQLREMAKLEPNFDDDKQDLESSSGFRSLLPEQNCQQL 954
                    NRN VCGQHKEEIL QLRE+A LEP+ +    + E +  F+S   E N Q  
Sbjct: 209  FYFSCKSQNRNAVCGQHKEEILRQLRELAGLEPDPNCHNPETEPTYVFQSAAGE-NMQTR 267

Query: 955  DTYISFEHKAEPTFFPSLEARPLQWCSYTGEDADQ-GLPSTSLQNYFNTNCLVPDKDSEI 1131
             T+   E  A P   PS E     W S  GE  +Q  +P T  +++   + +VPDK S I
Sbjct: 268  MTHKCCEPVARPISSPSYEENIFNWLSDNGEAGNQVSVPCTLPRSHLEESPVVPDKQSNI 327

Query: 1132 GHCFCHENNGHEAQSESPVITEAAQILPKVAPREFSIQDRNSAITRYKEKRKSRRYDKRI 1311
                 + N  HE + + P  T    + PKV   + + Q+R+SAI+RYKEKRK+RRYDK I
Sbjct: 328  DGSASYANGSHEGEPQYPASTGLISVFPKVVSHDINSQERDSAISRYKEKRKTRRYDKHI 387

Query: 1312 RYESRKVRAENRIRIKGRFAKMD 1380
            RYESRK RAE+R RI+GRFAKMD
Sbjct: 388  RYESRKARAESRTRIRGRFAKMD 410



 Score =  137 bits (345), Expect(2) = 8e-86
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = +3

Query: 306 RLCDFCGESIALLYCRADSAKLCFNCDRQVHSTNQLFTKHTRXXXXXXXXXXXXXIFCST 485
           RLCD+C ++ ALLYCRADSAKLC +CDR+VHSTNQLF+KHTR             IFC T
Sbjct: 24  RLCDYCNDTTALLYCRADSAKLCISCDREVHSTNQLFSKHTRSLLCDSCDASPASIFCET 83

Query: 486 HSSVLCQNCDWESHSLSLSPVHDRRPLEGFNG 581
             SV CQNCDWE H+LSLS VH+RRP+EGF+G
Sbjct: 84  EHSVFCQNCDWEKHNLSLSSVHNRRPIEGFSG 115


>ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like [Glycine max]
          Length = 349

 Score =  183 bits (464), Expect(2) = 8e-77
 Identities = 108/247 (43%), Positives = 137/247 (55%)
 Frame = +1

Query: 643  GEDDAGFVGSENYRFSDYLIWDTPSVVSLDDLISSNGSDHNFQAMGVPPLPKNRNTVCGQ 822
            G    G  G E    SD  +WD+PS V+LDDLISS+ S H+FQAM VPPLPKNR   CGQ
Sbjct: 125  GSGADGIFGGEIEGLSDLFVWDSPSFVTLDDLISSSPSSHSFQAMEVPPLPKNRKAACGQ 184

Query: 823  HKEEILCQLREMAKLEPNFDDDKQDLESSSGFRSLLPEQNCQQLDTYISFEHKAEPTFFP 1002
            HKEEIL QLRE+AK EP    D +   SS    S               FE + E   FP
Sbjct: 185  HKEEILSQLRELAKSEPL---DLEPYVSSGNLSS--------------GFEREPEADIFP 227

Query: 1003 SLEARPLQWCSYTGEDADQGLPSTSLQNYFNTNCLVPDKDSEIGHCFCHENNGHEAQSES 1182
            S E     W   + E   Q +P   L   +          S +G    + +NG   +   
Sbjct: 228  SHE-----WHRESSEPMYQVVPPDPLMRTYTEEIPFKHSTSAVGETQTYGDNG--GKPSI 280

Query: 1183 PVITEAAQILPKVAPREFSIQDRNSAITRYKEKRKSRRYDKRIRYESRKVRAENRIRIKG 1362
             + +E     PK A  E + Q+R+SA+ RYK+K+K+RR+DK IRYESRKVRAE+R+R+KG
Sbjct: 281  SLKSETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRAESRVRVKG 340

Query: 1363 RFAKMDH 1383
            RFAKM+H
Sbjct: 341  RFAKMEH 347



 Score =  132 bits (332), Expect(2) = 8e-77
 Identities = 61/93 (65%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = +3

Query: 306 RLCDFCGESIALLYCRADSAKLCFNCDRQVHSTNQLFTKHTRXXXXXXXXXXXXXIFCST 485
           R CD+CG S ALLYCRADSAKLCF+CDR+VHSTNQLF+KHTR             I CST
Sbjct: 6   RSCDYCGHSTALLYCRADSAKLCFSCDREVHSTNQLFSKHTRTLLCDACDHSPATILCST 65

Query: 486 HSSVLCQNCDWESHSLSLS-PVHDRRPLEGFNG 581
            +SVLCQNCDWE H+ +LS  +H+RRPLEGF G
Sbjct: 66  DTSVLCQNCDWEKHNPALSDSLHERRPLEGFTG 98


>ref|NP_001241399.1| zinc finger protein CONSTANS-LIKE 13-like [Glycine max]
            gi|260513718|gb|ACX42571.1| CONSTANS-like zinc finger
            protein [Glycine max]
          Length = 351

 Score =  180 bits (456), Expect(2) = 7e-76
 Identities = 107/244 (43%), Positives = 133/244 (54%)
 Frame = +1

Query: 652  DAGFVGSENYRFSDYLIWDTPSVVSLDDLISSNGSDHNFQAMGVPPLPKNRNTVCGQHKE 831
            D  F  SE    SD  +WD PS V+LDDLISS+ S H+FQAM VPPLPKNR   CGQHKE
Sbjct: 130  DGFFGASEIEGLSDMFVWDAPSFVTLDDLISSSPSSHSFQAMKVPPLPKNRKAACGQHKE 189

Query: 832  EILCQLREMAKLEPNFDDDKQDLESSSGFRSLLPEQNCQQLDTYISFEHKAEPTFFPSLE 1011
            EIL QLRE+AK EP                 L  E   Q  +  + FE   E   FPS E
Sbjct: 190  EILSQLRELAKSEP-----------------LDLEPYVQSGNLSLGFERDPEADIFPSHE 232

Query: 1012 ARPLQWCSYTGEDADQGLPSTSLQNYFNTNCLVPDKDSEIGHCFCHENNGHEAQSESPVI 1191
                 W   + E   Q +P       +     V    S +G    H    +E +    + 
Sbjct: 233  -----WHRESSEPMHQVVPPDPSMGTYTEEIPVKHSTSAVGE--NHTYGDNEGKPSISLK 285

Query: 1192 TEAAQILPKVAPREFSIQDRNSAITRYKEKRKSRRYDKRIRYESRKVRAENRIRIKGRFA 1371
            +E     PK A  E + Q+R+SA+ RYK+K+K+RR+DK IRYESRKVRAE+R+R+KGRFA
Sbjct: 286  SETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRAESRVRVKGRFA 345

Query: 1372 KMDH 1383
            KM H
Sbjct: 346  KMGH 349



 Score =  132 bits (332), Expect(2) = 7e-76
 Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +3

Query: 306 RLCDFCGESIALLYCRADSAKLCFNCDRQVHSTNQLFTKHTRXXXXXXXXXXXXXIFCST 485
           R CD+CG S ALLYCRADSAKLCF+CDR+VHSTNQLF+KHTR             I CST
Sbjct: 7   RPCDYCGNSTALLYCRADSAKLCFSCDREVHSTNQLFSKHTRTLLCDACDDSPATILCST 66

Query: 486 HSSVLCQNCDWESHSLSLS-PVHDRRPLEGFNG 581
            +SVLCQNCDWE+H+ +LS  +H+RRPLEGF G
Sbjct: 67  DTSVLCQNCDWENHNPALSDSLHERRPLEGFTG 99


>ref|XP_003625866.1| CONSTANS-like zinc finger protein [Medicago truncatula]
            gi|355500881|gb|AES82084.1| CONSTANS-like zinc finger
            protein [Medicago truncatula]
          Length = 372

 Score =  172 bits (435), Expect(2) = 6e-74
 Identities = 106/257 (41%), Positives = 137/257 (53%), Gaps = 15/257 (5%)
 Frame = +1

Query: 658  GFVGSENYRFSDYLIWDTPSVVSLDDLISSNGSDHNFQAMGVPPLPKNRNTVCGQHKEEI 837
            GFVG E    SD  +WD PS VSLDDLISS+ S HN++AM VPPLPKNR   CG+H+EEI
Sbjct: 140  GFVGYEIEGLSDMFVWDAPSFVSLDDLISSSPSSHNYRAMEVPPLPKNRKAACGRHREEI 199

Query: 838  LCQLREMAKLEPNFDDDKQDLESSSGFRSLLPEQNCQQLDTYISFEHKAEPTFFPSLEAR 1017
            L QLREM K EP +D                PE+     +   SF+   +    PS E  
Sbjct: 200  LNQLREMTKSEP-YD----------------PEEYIPPANLSTSFDCDVKADIVPSNE-- 240

Query: 1018 PLQWCSYTGEDADQGLPSTSLQNYFNTNCLVPDKDSEIGHCFCHENNGHEAQS------- 1176
               W   + E   Q +P  +          V    S +G    H NNG            
Sbjct: 241  ---WLRESSEPMYQVVPVDTSFKAHTEEISVKHSVSSVGEPHTHCNNGGTPSEPLNHCNN 297

Query: 1177 --------ESPVITEAAQILPKVAPREFSIQDRNSAITRYKEKRKSRRYDKRIRYESRKV 1332
                    +S  ++  ++ +P   P E + Q+R+SA+ RYK+K+K+RRYDK IRYESRKV
Sbjct: 298  GGTPSEYVKSETLSTTSKAVP--PPYELASQERDSALLRYKQKKKTRRYDKHIRYESRKV 355

Query: 1333 RAENRIRIKGRFAKMDH 1383
            RAE+R R+KGRFAK+DH
Sbjct: 356  RAESRTRVKGRFAKIDH 372



 Score =  134 bits (336), Expect(2) = 6e-74
 Identities = 60/92 (65%), Positives = 69/92 (75%)
 Frame = +3

Query: 306 RLCDFCGESIALLYCRADSAKLCFNCDRQVHSTNQLFTKHTRXXXXXXXXXXXXXIFCST 485
           R CD+CG S A++YCRADSAKLCF+CDR+VHSTNQLF+KHTR             I CST
Sbjct: 18  RPCDYCGHSNAVIYCRADSAKLCFSCDREVHSTNQLFSKHTRSLICDSCDDSPATILCST 77

Query: 486 HSSVLCQNCDWESHSLSLSPVHDRRPLEGFNG 581
            SSV CQNCDWE+H+LSLS  H+RR LEGF G
Sbjct: 78  ESSVFCQNCDWENHNLSLSSPHERRSLEGFTG 109


Top