BLASTX nr result

ID: Panax21_contig00021421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021421
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887696.1| hypothetical protein ARALYDRAFT_895660 [Arab...   124   6e-27
ref|NP_177894.1| ubiquitin-fold modifier 1 [Arabidopsis thaliana...   124   8e-27
ref|XP_003614786.1| Ubiquitin-fold modifier [Medicago truncatula...   124   1e-26
ref|XP_002301006.1| predicted protein [Populus trichocarpa] gi|1...   124   1e-26
ref|XP_003565130.1| PREDICTED: ubiquitin-fold modifier 1-like is...   123   1e-26

>ref|XP_002887696.1| hypothetical protein ARALYDRAFT_895660 [Arabidopsis lyrata subsp.
           lyrata] gi|297333537|gb|EFH63955.1| hypothetical protein
           ARALYDRAFT_895660 [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/63 (95%), Positives = 62/63 (98%)
 Frame = -2

Query: 359 VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQGAGNVFLKHGSELRLIPRDRV 180
           VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQ AGNVFLKHGSELRLIPRDRV
Sbjct: 27  VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGINPQQSAGNVFLKHGSELRLIPRDRV 86

Query: 179 GAS 171
           GA+
Sbjct: 87  GAA 89


>ref|NP_177894.1| ubiquitin-fold modifier 1 [Arabidopsis thaliana]
           gi|20140765|sp|Q9CA23.1|UFM1_ARATH RecName:
           Full=Ubiquitin-fold modifier 1; Flags: Precursor
           gi|12323301|gb|AAG51633.1|AC012193_15 unknown protein;
           14107-15252 [Arabidopsis thaliana]
           gi|20260380|gb|AAM13088.1| unknown protein [Arabidopsis
           thaliana] gi|23197778|gb|AAN15416.1| unknown protein
           [Arabidopsis thaliana] gi|332197891|gb|AEE36012.1|
           ubiquitin-fold modifier 1 [Arabidopsis thaliana]
          Length = 93

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/62 (96%), Positives = 61/62 (98%)
 Frame = -2

Query: 359 VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQGAGNVFLKHGSELRLIPRDRV 180
           VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQ AGNVFLKHGSELRLIPRDRV
Sbjct: 26  VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGINPQQSAGNVFLKHGSELRLIPRDRV 85

Query: 179 GA 174
           GA
Sbjct: 86  GA 87


>ref|XP_003614786.1| Ubiquitin-fold modifier [Medicago truncatula]
           gi|355516121|gb|AES97744.1| Ubiquitin-fold modifier
           [Medicago truncatula] gi|388495206|gb|AFK35669.1|
           unknown [Medicago truncatula]
          Length = 95

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/63 (96%), Positives = 61/63 (96%)
 Frame = -2

Query: 359 VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQGAGNVFLKHGSELRLIPRDRV 180
           VPE APFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQ AGNVFLKHGSELRLIPRDRV
Sbjct: 27  VPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRV 86

Query: 179 GAS 171
           GAS
Sbjct: 87  GAS 89


>ref|XP_002301006.1| predicted protein [Populus trichocarpa] gi|118484173|gb|ABK93968.1|
           unknown [Populus trichocarpa]
           gi|118485033|gb|ABK94381.1| unknown [Populus
           trichocarpa] gi|222842732|gb|EEE80279.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/63 (96%), Positives = 61/63 (96%)
 Frame = -2

Query: 359 VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQGAGNVFLKHGSELRLIPRDRV 180
           VPE APFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQ AGNVFLKHGSELRLIPRDRV
Sbjct: 33  VPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRV 92

Query: 179 GAS 171
           GAS
Sbjct: 93  GAS 95


>ref|XP_003565130.1| PREDICTED: ubiquitin-fold modifier 1-like isoform 1 [Brachypodium
           distachyon] gi|357126912|ref|XP_003565131.1| PREDICTED:
           ubiquitin-fold modifier 1-like isoform 2 [Brachypodium
           distachyon]
          Length = 99

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/66 (90%), Positives = 62/66 (93%)
 Frame = -2

Query: 359 VPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQGAGNVFLKHGSELRLIPRDRV 180
           VPE APFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQ AGNVFLKHGSELRLIPRDRV
Sbjct: 33  VPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRV 92

Query: 179 GASGIS 162
           GA  ++
Sbjct: 93  GARAVT 98


Top