BLASTX nr result

ID: Panax21_contig00021384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021384
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [...    73   3e-11
ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    71   8e-11
ref|XP_002301117.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    70   1e-10
ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...    70   1e-10

>ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223533281|gb|EEF35034.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3666

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = -1

Query: 134  SMYSAASPVIQWYWEVAQGFSKEDKARLLQFVTGTSK 24
            S YSAASPVIQW+WEV QGFSKEDKARLLQFVTGTSK
Sbjct: 3561 SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSK 3597



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = -2

Query: 214  NDISDILDLTFSIDADEEKLILYERAQVCTVQHLLLSSGIGRLLKVS 74
            NDISD+LDLTFSIDADEEKLILYER +V    H L+    GR +KV+
Sbjct: 3449 NDISDVLDLTFSIDADEEKLILYERTEV--TDHELIPG--GRNIKVT 3491


>ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3654

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -1

Query: 134  SMYSAASPVIQWYWEVAQGFSKEDKARLLQFVTGTSK 24
            S YS ASPVIQW+WEV QGFSKEDKARLLQFVTGTSK
Sbjct: 3549 SGYSGASPVIQWFWEVVQGFSKEDKARLLQFVTGTSK 3585


>ref|XP_002301117.1| predicted protein [Populus trichocarpa] gi|222842843|gb|EEE80390.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -1

Query: 134 SMYSAASPVIQWYWEVAQGFSKEDKARLLQFVTGTSK 24
           S YS ASPVIQW+WEV QGFSKEDKARLLQFVTGTSK
Sbjct: 366 SGYSPASPVIQWFWEVVQGFSKEDKARLLQFVTGTSK 402


>ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL2-like
            [Cucumis sativus]
          Length = 3666

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -1

Query: 134  SMYSAASPVIQWYWEVAQGFSKEDKARLLQFVTGTSK 24
            S YSAASPVIQW+WEV Q FSKEDKARLLQFVTGTSK
Sbjct: 3561 SGYSAASPVIQWFWEVVQSFSKEDKARLLQFVTGTSK 3597


>ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Cucumis sativus]
          Length = 3656

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -1

Query: 134  SMYSAASPVIQWYWEVAQGFSKEDKARLLQFVTGTSK 24
            S YSAASPVIQW+WEV Q FSKEDKARLLQFVTGTSK
Sbjct: 3551 SGYSAASPVIQWFWEVVQSFSKEDKARLLQFVTGTSK 3587


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