BLASTX nr result

ID: Panax21_contig00021380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021380
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]    65   1e-08
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]    56   8e-06
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    56   8e-06
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    56   8e-06

>emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]
          Length = 750

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
 Frame = -3

Query: 783 YEKESELKSGLYFENPMTVHSYKTALLNTNTND-SSLSRSVLSIVQVVDEIPRVIIPYRS 607
           Y K S++K+  Y   P+ V  YK    +   ND  S    +  I   +D +    IP R 
Sbjct: 12  YTKASDVKNVFYTNQPIFVLLYKYEYEDVFPNDVPSELPPIRGIEHQIDFVLGATIPNRP 71

Query: 606 A-NSIPEETTELPRRVGELMKVGIVREDMSSCVDYEIIVSKEDGTTSLFVDFE 451
           A  S PEETTEL R+V EL+  G VRE MS C    ++V K+DGT  + VDF+
Sbjct: 72  AYKSNPEETTELQRQVEELLTKGHVRESMSPCAMPVLLVPKKDGTWRMCVDFK 124


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 39/92 (42%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = -3

Query: 729 VHSYKTALLNTNTNDSSLSRSVLSIVQVVDEIPRVIIPYRSA-NSIPEETTELPRRVGEL 553
           V  YK    N   +   L R    I   +D +P   IP R A  S PEET EL R+V EL
Sbjct: 401 VKEYKDVFPNNVLSGLPLIRE---IEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEEL 457

Query: 552 MKVGIVREDMSSCVDYEIIVSKEDGTTSLFVD 457
           +  G VRE MS CV   ++V K+DGT  + VD
Sbjct: 458 LTKGHVRESMSPCVVSVLLVPKKDGTWRVCVD 489


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 42/150 (28%)
 Frame = -3

Query: 738  PMTVHSYKTALLNTNTNDSSLSRSVLSIVQ----------------------VVDEIPRV 625
            P+ + +YK  L+N      SL  SV S++Q                       +D +P  
Sbjct: 640  PIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGS 699

Query: 624  IIPYRSA-NSIPEETTELPRRVGELMKVGIVREDMSSCVDYEIIVSKEDGTTSLFVDFE- 451
             +P R A  S PEET EL R+V EL+  G VRE MS C    ++V K+DGT  + VD   
Sbjct: 700  QLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRA 759

Query: 450  ------------------LDQFCG*IIFER 415
                              LDQ CG  IF +
Sbjct: 760  INKITVKYRHPIPRLDDMLDQLCGSKIFSK 789


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 42/150 (28%)
 Frame = -3

Query: 738  PMTVHSYKTALLNTNTNDSSLSRSVLSIVQ----------------------VVDEIPRV 625
            P+ + +YK  L+N      SL  SV S++Q                       +D +P  
Sbjct: 640  PIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGS 699

Query: 624  IIPYRSA-NSIPEETTELPRRVGELMKVGIVREDMSSCVDYEIIVSKEDGTTSLFVDFE- 451
             +P R A  S PEET EL R+V EL+  G VRE MS C    ++V K+DGT  + VD   
Sbjct: 700  QLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRA 759

Query: 450  ------------------LDQFCG*IIFER 415
                              LDQ CG  IF +
Sbjct: 760  INKITVKYRHPIPRLDDMLDQLCGSKIFSK 789


Top