BLASTX nr result

ID: Panax21_contig00021376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021376
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513029.1| protein with unknown function [Ricinus commu...    73   5e-11
ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|2...    70   4e-10
ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]    60   6e-07

>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
 Frame = -3

Query: 565 YISSPMKVKTCASNFRALVQELTGRDSDVSRYTDFN--AESPDGSRISDLNAESSESYGX 392
           YISSPMKV+T AS FRALVQELTG+DSD +R+ D N  AE+       D +  +S+ +G 
Sbjct: 26  YISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAENYSTETTPDRSRAASDEHG- 84

Query: 391 XXXXXXXXXXXDEANVFRPVRFDSLVVDPYRDSPTSSDSLFEPFDDTFSSQMAEKLEEMF 212
                         +V  P+   S     +  SP S  S+F+PF D F   M      MF
Sbjct: 85  --------------SVLLPL-MSSYNEPSFSSSPDSDSSIFDPF-DRFLPPMEGSFMSMF 128

Query: 211 PSNLFNYESY 182
            SN F +ES+
Sbjct: 129 QSN-FPHESF 137


>ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|222854862|gb|EEE92409.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 51/136 (37%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
 Frame = -3

Query: 565 YISSPMKVKTCASNFRALVQELTGRDSDVSRYTDFNAESPDGSRISDLNAESSESYGXXX 386
           YIS+PMK K  AS FRALVQELTG+DS          E PD S+  D +    +  G   
Sbjct: 35  YISNPMKFKASASEFRALVQELTGQDS----------ELPDPSKFVDSDGHDRDVGGNYQ 84

Query: 385 XXXXXXXXXDEANVFRPVRFDS------LVVDPYRDSPTSSDSLFEPFDDTFSSQMAEKL 224
                       N  + V  D        + DP +  P   D+ FE FDD F  QM E +
Sbjct: 85  TV---------PNASKSVVVDGGHAQEVPIEDPSQVQPERQDAPFESFDDVFMPQMLEDI 135

Query: 223 EEMFPSNLFNYESYTS 176
            E  PS L+ YE+Y S
Sbjct: 136 SEKMPSKLW-YEAYNS 150


>ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|222867251|gb|EEF04382.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
 Frame = -3

Query: 565 YISSPMKVKTCASNFRALVQELTGRDSDVSRYTDFNAESPDGSRISDLNAESSESYGXXX 386
           YIS+PMK K  AS FRALVQELTG+DS          E PD ++I D      + +G   
Sbjct: 33  YISNPMKFKISASGFRALVQELTGQDS----------ELPDPTKIVD-----DDDHGVGG 77

Query: 385 XXXXXXXXXDEANVFRPVRFDSLVV-----DPYRDSPTS-SDSLFEPFDDTFSSQMAEKL 224
                      +N  + V  D   +     DP ++ P +  D+ F  FDD F  QM E +
Sbjct: 78  NYRTV------SNASKTVVDDHCALEVPTKDPSQEQPPARQDAPFGSFDDVFMPQMLENV 131

Query: 223 EEMFPSNLFNYESYT 179
             + PSN + YE+Y+
Sbjct: 132 AGIMPSNSW-YEAYS 145


>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 51/136 (37%), Positives = 61/136 (44%)
 Frame = -3

Query: 565 YISSPMKVKTCASNFRALVQELTGRDSDVSRYTDFNAESPDGSRISDLNAESSESYGXXX 386
           YISSPMKVKT AS FRALVQELTG+DSD  R+ D N  + D   I    AE         
Sbjct: 27  YISSPMKVKTSASKFRALVQELTGKDSDAERFMDING-ARDSLEIPHQTAEYDH------ 79

Query: 385 XXXXXXXXXDEANVFRPVRFDSLVVDPYRDSPTSSDSLFEPFDDTFSSQMAEKLEEMFPS 206
                       +VF P+        P   S TSS+S     D  F   M      M   
Sbjct: 80  ----------HPSVF-PLTNSCNDQSP---STTSSESFLGSLDGEFFPSMEGSFMGMLQP 125

Query: 205 NLFNYESYTSHEIDVL 158
           +LF    + S ++DVL
Sbjct: 126 SLF----HESFQLDVL 137


>emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
          Length = 124

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = -3

Query: 565 YISSPMKVKTCASNFRALVQELTGRDSDVSRYTD 464
           YISSPMKVKT AS FRALVQELTGRDSDV RY +
Sbjct: 16  YISSPMKVKTSASKFRALVQELTGRDSDVERYME 49


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