BLASTX nr result

ID: Panax21_contig00021369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021369
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   210   8e-53
ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putat...   201   4e-50
tpg|DAA59027.1| TPA: hypothetical protein ZEAMMB73_534205 [Zea m...   198   3e-49
tpg|DAA59025.1| TPA: hypothetical protein ZEAMMB73_534205 [Zea m...   198   3e-49

>ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Vitis vinifera]
           gi|297743111|emb|CBI35978.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score =  210 bits (535), Expect = 8e-53
 Identities = 102/107 (95%), Positives = 104/107 (97%)
 Frame = +3

Query: 111 MPTVSVKWQKELFSAVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSTL 290
           MPTVSVKWQKE F AVEIDT+Q PYVFKCQL+DLTGVPPERQKIMVKGGLLKDDADWSTL
Sbjct: 1   MPTVSVKWQKEFFPAVEIDTTQSPYVFKCQLFDLTGVPPERQKIMVKGGLLKDDADWSTL 60

Query: 291 GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLF 431
           GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLF
Sbjct: 61  GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLF 107


>ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|222835980|gb|EEE74401.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  202 bits (514), Expect = 2e-50
 Identities = 96/107 (89%), Positives = 103/107 (96%)
 Frame = +3

Query: 111 MPTVSVKWQKELFSAVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSTL 290
           M TVSVKW KE+F  VEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADW+T+
Sbjct: 1   MLTVSVKWLKEVFPKVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWATV 60

Query: 291 GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLF 431
           GVKEGQK+MMMGTADEIVKAPEKGP+FMEDLPEEEQVVA+GH+AGLF
Sbjct: 61  GVKEGQKMMMMGTADEIVKAPEKGPIFMEDLPEEEQVVALGHTAGLF 107


>ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223525817|gb|EEF28259.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 482

 Score =  201 bits (512), Expect = 4e-50
 Identities = 96/107 (89%), Positives = 104/107 (97%)
 Frame = +3

Query: 111 MPTVSVKWQKELFSAVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSTL 290
           M +VSVKWQK++F  VEIDTSQPPY+FKCQL+DLTGVPPERQKIMVKGGLLKDDADW+T+
Sbjct: 1   MLSVSVKWQKKVFPQVEIDTSQPPYLFKCQLFDLTGVPPERQKIMVKGGLLKDDADWATV 60

Query: 291 GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLF 431
           GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGH+AGLF
Sbjct: 61  GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAGLF 107


>tpg|DAA59027.1| TPA: hypothetical protein ZEAMMB73_534205 [Zea mays]
          Length = 483

 Score =  198 bits (504), Expect = 3e-49
 Identities = 94/107 (87%), Positives = 102/107 (95%)
 Frame = +3

Query: 111 MPTVSVKWQKELFSAVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSTL 290
           MPTVSVKWQKELF  +EIDTSQPP VFK QLY LTGVPPERQKIMVKGG+LKDDADWSTL
Sbjct: 1   MPTVSVKWQKELFPGIEIDTSQPPIVFKTQLYTLTGVPPERQKIMVKGGILKDDADWSTL 60

Query: 291 GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLF 431
           GVK+GQKLMM+GTADEIVKAPEKGPVF+EDLPEEEQV+A+GHSAGL+
Sbjct: 61  GVKDGQKLMMIGTADEIVKAPEKGPVFVEDLPEEEQVIALGHSAGLY 107


>tpg|DAA59025.1| TPA: hypothetical protein ZEAMMB73_534205 [Zea mays]
          Length = 379

 Score =  198 bits (504), Expect = 3e-49
 Identities = 94/107 (87%), Positives = 102/107 (95%)
 Frame = +3

Query: 111 MPTVSVKWQKELFSAVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSTL 290
           MPTVSVKWQKELF  +EIDTSQPP VFK QLY LTGVPPERQKIMVKGG+LKDDADWSTL
Sbjct: 1   MPTVSVKWQKELFPGIEIDTSQPPIVFKTQLYTLTGVPPERQKIMVKGGILKDDADWSTL 60

Query: 291 GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLF 431
           GVK+GQKLMM+GTADEIVKAPEKGPVF+EDLPEEEQV+A+GHSAGL+
Sbjct: 61  GVKDGQKLMMIGTADEIVKAPEKGPVFVEDLPEEEQVIALGHSAGLY 107


Top