BLASTX nr result
ID: Panax21_contig00021368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00021368
(1403 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ... 608 e-171
emb|CBI18302.3| unnamed protein product [Vitis vinifera] 608 e-171
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2... 591 e-166
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun... 580 e-163
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ... 549 e-154
>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
vinifera]
Length = 564
Score = 608 bits (1568), Expect = e-171
Identities = 301/452 (66%), Positives = 360/452 (79%), Gaps = 1/452 (0%)
Frame = +1
Query: 1 LGREFCEKLDEYLIHTGEESHGIAVIQSNPDQSKHLETARMRLYDIWIDFVNLRSEDYCE 180
LGREFCEK+++YL TGEE GI VIQ NPDQSKHLETARMRL+D WIDFVNLRSEDY E
Sbjct: 112 LGREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSE 171
Query: 181 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINSSSVEDFTGRGIADLRSGKIVTPLPPRET 360
NSRIPTMRFGTA+EDAYRRDLTINSLFYNIN+SSVEDFTGRGI DL+SGKIVTPLPP++T
Sbjct: 172 NSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDT 231
Query: 361 FLDDPLRVIRAIRFGARFEFILDEELKKAASEDDVKDAIAEKVSRERIGHEIDLMISGNQ 540
FLDDPLRV+RAIRFGARF FILDEELK AA DDV+ AIA+K+SRERIGHEIDLMISGN+
Sbjct: 232 FLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNE 291
Query: 541 PVKAMTYLSKLLLFGXXXXXXXXXXXXXXXGHDRLCVAYIDAAWRLVQLIGGSSFTGEQK 720
PVKAMTY+ LLLF DRLC+ YIDA W L+QLIG S+F EQ+
Sbjct: 292 PVKAMTYICDLLLFSVVFSLPPIVKPAISEECDRLCIGYIDAGWNLIQLIGSSTFNDEQR 351
Query: 721 RLALYAALFLPFRQTVYRDNKSKKIPIVSYIFRNSLKLKSRDAETVVSLHNATEKFISLI 900
RL LYAALFLPFR+T+Y K++KIP+V++I RNSLKL++ DA+TVVS+H A EKFISLI
Sbjct: 352 RLYLYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLI 411
Query: 901 PFXXXXXXXXXXXXNWKKEIIDVPVASQXXXXXXXXXXEIKDFWRVALLLSMLLYPNNSD 1080
PF W EI+D+PV S+ EIK FWRVAL++S LLYPN+ +
Sbjct: 412 PFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDIN 471
Query: 1081 GTNS-SVEHIKLDERRELFKQIEDAIIRQGLDKIWEVKPLVNGKEIMSVLQLKTGGPLVS 1257
T S + +LD+RR++F+ +E+AI+ GL+++WE+KPLVNGK+IM+VLQLK+GGPLV
Sbjct: 472 HTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPLVR 531
Query: 1258 EWQQRLLEWQLAHPSRSAEECIDWMRQSHSKR 1353
+WQQ+L++WQLAHPS +AEEC+DWMRQ KR
Sbjct: 532 DWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 563
>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 608 bits (1568), Expect = e-171
Identities = 301/452 (66%), Positives = 360/452 (79%), Gaps = 1/452 (0%)
Frame = +1
Query: 1 LGREFCEKLDEYLIHTGEESHGIAVIQSNPDQSKHLETARMRLYDIWIDFVNLRSEDYCE 180
LGREFCEK+++YL TGEE GI VIQ NPDQSKHLETARMRL+D WIDFVNLRSEDY E
Sbjct: 67 LGREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSE 126
Query: 181 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINSSSVEDFTGRGIADLRSGKIVTPLPPRET 360
NSRIPTMRFGTA+EDAYRRDLTINSLFYNIN+SSVEDFTGRGI DL+SGKIVTPLPP++T
Sbjct: 127 NSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDT 186
Query: 361 FLDDPLRVIRAIRFGARFEFILDEELKKAASEDDVKDAIAEKVSRERIGHEIDLMISGNQ 540
FLDDPLRV+RAIRFGARF FILDEELK AA DDV+ AIA+K+SRERIGHEIDLMISGN+
Sbjct: 187 FLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNE 246
Query: 541 PVKAMTYLSKLLLFGXXXXXXXXXXXXXXXGHDRLCVAYIDAAWRLVQLIGGSSFTGEQK 720
PVKAMTY+ LLLF DRLC+ YIDA W L+QLIG S+F EQ+
Sbjct: 247 PVKAMTYICDLLLFSVVFSLPPIVKPAISEECDRLCIGYIDAGWNLIQLIGSSTFNDEQR 306
Query: 721 RLALYAALFLPFRQTVYRDNKSKKIPIVSYIFRNSLKLKSRDAETVVSLHNATEKFISLI 900
RL LYAALFLPFR+T+Y K++KIP+V++I RNSLKL++ DA+TVVS+H A EKFISLI
Sbjct: 307 RLYLYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLI 366
Query: 901 PFXXXXXXXXXXXXNWKKEIIDVPVASQXXXXXXXXXXEIKDFWRVALLLSMLLYPNNSD 1080
PF W EI+D+PV S+ EIK FWRVAL++S LLYPN+ +
Sbjct: 367 PFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDIN 426
Query: 1081 GTNS-SVEHIKLDERRELFKQIEDAIIRQGLDKIWEVKPLVNGKEIMSVLQLKTGGPLVS 1257
T S + +LD+RR++F+ +E+AI+ GL+++WE+KPLVNGK+IM+VLQLK+GGPLV
Sbjct: 427 HTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPLVR 486
Query: 1258 EWQQRLLEWQLAHPSRSAEECIDWMRQSHSKR 1353
+WQQ+L++WQLAHPS +AEEC+DWMRQ KR
Sbjct: 487 DWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 518
>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
predicted protein [Populus trichocarpa]
Length = 528
Score = 591 bits (1524), Expect = e-166
Identities = 285/456 (62%), Positives = 355/456 (77%), Gaps = 1/456 (0%)
Frame = +1
Query: 1 LGREFCEKLDEYLIHTGEESHGIAVIQSNPDQSKHLETARMRLYDIWIDFVNLRSEDYCE 180
LG EF +K+ EYL+ TGEE+HG+ VI NPDQSKHLETARMRL D+WIDFVNLRSEDY E
Sbjct: 73 LGSEFVDKVREYLLSTGEEAHGVGVIPRNPDQSKHLETARMRLLDLWIDFVNLRSEDYSE 132
Query: 181 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINSSSVEDFTGRGIADLRSGKIVTPLPPRET 360
NSRIPTM FGTA+EDAYRRDLTINSLFYNIN+SSVED TGRGI DL+SGKIVTPLPP++T
Sbjct: 133 NSRIPTMTFGTAKEDAYRRDLTINSLFYNINTSSVEDLTGRGIEDLKSGKIVTPLPPKDT 192
Query: 361 FLDDPLRVIRAIRFGARFEFILDEELKKAASEDDVKDAIAEKVSRERIGHEIDLMISGNQ 540
FLDDPLRV+RAIRFGARF F+L+EELK+AA+ DDVK+A+ K+S+ERIG EIDLMISGNQ
Sbjct: 193 FLDDPLRVLRAIRFGARFGFVLEEELKEAAACDDVKNALKAKISKERIGTEIDLMISGNQ 252
Query: 541 PVKAMTYLSKLLLFGXXXXXXXXXXXXXXXGHDRLCVAYIDAAWRLVQLIGGSSFTGEQK 720
PVKAMTY++ L LF LCVAY+DAAW L+ LIGGSSFTGEQ+
Sbjct: 253 PVKAMTYIADLTLFWVVFNLHPKVEPTVSEECQGLCVAYLDAAWNLIHLIGGSSFTGEQR 312
Query: 721 RLALYAALFLPFRQTVYRDNKSKKIPIVSYIFRNSLKLKSRDAETVVSLHNATEKFISLI 900
RL LYAALFLP R T+Y+D K KK+P+V+YIFR+SLK K+ D ETV+ +H + EKF++LI
Sbjct: 313 RLCLYAALFLPLRNTIYKDEKGKKVPVVNYIFRDSLKQKASDPETVIKIHRSLEKFLTLI 372
Query: 901 PFXXXXXXXXXXXXNWKKEIIDVPVASQXXXXXXXXXXEIKDFWRVALLLSMLLYPNNSD 1080
P + E+ DVP+ S+ E+K+FWRV LL+S +LYP+++D
Sbjct: 373 PLLTSNDDTQPAEVDMGMELFDVPITSKLRVATGFLLREVKEFWRVGLLISTMLYPSDTD 432
Query: 1081 GTNSSVE-HIKLDERRELFKQIEDAIIRQGLDKIWEVKPLVNGKEIMSVLQLKTGGPLVS 1257
T +E +LD R++LFK EDAI+ GL+++W++KPLVNGK+IM+VLQLK+GGP+V
Sbjct: 433 STQDFLEKKFELDRRKDLFKAAEDAIVNLGLERVWDLKPLVNGKDIMTVLQLKSGGPVVK 492
Query: 1258 EWQQRLLEWQLAHPSRSAEECIDWMRQSHSKRARTE 1365
EWQQ+LL WQ AHP+ + EEC+DWM+++H KRA+ E
Sbjct: 493 EWQQKLLAWQFAHPAGTVEECLDWMKETHLKRAKME 528
>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
[Ricinus communis]
Length = 577
Score = 580 bits (1495), Expect = e-163
Identities = 285/456 (62%), Positives = 356/456 (78%), Gaps = 1/456 (0%)
Frame = +1
Query: 1 LGREFCEKLDEYLIHTGEESHGIAVIQSNPDQSKHLETARMRLYDIWIDFVNLRSEDYCE 180
LG EF +K+ EYL+ TGEE G+ +I NPDQSKHLETARMRL+D+WIDFVNLR EDY E
Sbjct: 123 LGSEFVDKVREYLLSTGEEVGGLGIIPRNPDQSKHLETARMRLFDLWIDFVNLRCEDYTE 182
Query: 181 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINSSSVEDFTGRGIADLRSGKIVTPLPPRET 360
+SRIPTM+FGTAEEDA+RRDLTINSLFYNIN+SSVED T RGI DL+ GKIVTPLPP+ T
Sbjct: 183 DSRIPTMKFGTAEEDAFRRDLTINSLFYNINTSSVEDLTERGIEDLKFGKIVTPLPPKAT 242
Query: 361 FLDDPLRVIRAIRFGARFEFILDEELKKAASEDDVKDAIAEKVSRERIGHEIDLMISGNQ 540
FLDDPLRV+RAIRFGARF FILDEELK+AA+ DDVK+A+A K+S+ERIG+EIDLM+SGNQ
Sbjct: 243 FLDDPLRVLRAIRFGARFGFILDEELKEAAACDDVKNALAAKISKERIGNEIDLMLSGNQ 302
Query: 541 PVKAMTYLSKLLLFGXXXXXXXXXXXXXXXGHDRLCVAYIDAAWRLVQLIGGSSFTGEQK 720
PVKAMTY+ L LF G +LC+AY+DA W L+Q I S FT EQ+
Sbjct: 303 PVKAMTYIGDLTLFWIIFGLPPKVEPAVSEGCHKLCIAYLDATWNLIQSIRSSFFTDEQR 362
Query: 721 RLALYAALFLPFRQTVYRDNKSKKIPIVSYIFRNSLKLKSRDAETVVSLHNATEKFISLI 900
RL+LYAALFLPFR +Y + K K +P+V++IF++SLK K+ D+ETV+ +H + EKF+++I
Sbjct: 363 RLSLYAALFLPFRNIIYIE-KGKNVPVVNFIFKDSLKQKASDSETVMKIHKSLEKFLNII 421
Query: 901 PFXXXXXXXXXXXXNWKKEIIDVPVASQXXXXXXXXXXEIKDFWRVALLLSMLLYPNNSD 1080
P +W E+IDVP +++ EIKDFWRVALL+S ++YP + D
Sbjct: 422 PLLTSDDDTQPAEVDWALELIDVPFSAKLRVLTGFLLREIKDFWRVALLISTMIYPADID 481
Query: 1081 GTNSSVE-HIKLDERRELFKQIEDAIIRQGLDKIWEVKPLVNGKEIMSVLQLKTGGPLVS 1257
T S ++ +LD+R+ELFK +EDAI +QGL+KIW+VKPLVNGKEIMSVLQLK+GGPLV
Sbjct: 482 STQSFLDKQFELDKRKELFKTVEDAITKQGLEKIWDVKPLVNGKEIMSVLQLKSGGPLVR 541
Query: 1258 EWQQRLLEWQLAHPSRSAEECIDWMRQSHSKRARTE 1365
EWQQ+LL WQLAHP+ +AEEC+DWM+++H KRAR E
Sbjct: 542 EWQQKLLAWQLAHPTGTAEECLDWMKETHLKRARIE 577
>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Cucumis sativus]
Length = 577
Score = 549 bits (1414), Expect = e-154
Identities = 276/457 (60%), Positives = 345/457 (75%), Gaps = 2/457 (0%)
Frame = +1
Query: 1 LGREFCEKLDEYLIHTGEESHGIAVIQSNPDQSKHLETARMRLYDIWIDFVNLRSEDYCE 180
LG EF +K+ EYL+ GEE+ G+AVI NPDQSKHLETARMR++D+WIDFVNLR E+Y E
Sbjct: 120 LGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDFVNLRCEEYSE 179
Query: 181 NSRIPT-MRFGTAEEDAYRRDLTINSLFYNINSSSVEDFTGRGIADLRSGKIVTPLPPRE 357
NSRIPT +FGTAEEDAYRRDLTINSLFYNIN S VEDFT RGI+DL+ GKIVTPLP +
Sbjct: 180 NSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKA 239
Query: 358 TFLDDPLRVIRAIRFGARFEFILDEELKKAASEDDVKDAIAEKVSRERIGHEIDLMISGN 537
TF+DDPLRV+RAIRF ARFEF LDEELK+AA+ ++VK A+A K+SRERIG EIDLMI+GN
Sbjct: 240 TFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMIAGN 299
Query: 538 QPVKAMTYLSKLLLFGXXXXXXXXXXXXXXXGHDRLCVAYIDAAWRLVQLIGGSSFTGEQ 717
QPVKAM+Y+S L LF +RLCVA +DA W L+Q I +F+ EQ
Sbjct: 300 QPVKAMSYISDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDATWNLIQHINCFTFSDEQ 359
Query: 718 KRLALYAALFLPFRQTVYRDNKSKKIPIVSYIFRNSLKLKSRDAETVVSLHNATEKFISL 897
KRL+LYA+LFLPFR+ ++D KSKKIPIV+YIFR+SLK K+ DAETVV++H A EKF+SL
Sbjct: 360 KRLSLYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQALEKFLSL 419
Query: 898 IPFXXXXXXXXXXXXNWKKEIIDVPVASQXXXXXXXXXXEIKDFWRVALLLSMLLYPNNS 1077
IP +W E DVP S+ EIKDFW VALL++ LLYP +
Sbjct: 420 IPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLYPADV 479
Query: 1078 DGTNSSV-EHIKLDERRELFKQIEDAIIRQGLDKIWEVKPLVNGKEIMSVLQLKTGGPLV 1254
D + H +L++R+ELF + + I++ GL+ +WE+KPLVNGKEIM++LQLK GGPLV
Sbjct: 480 DYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQLKAGGPLV 539
Query: 1255 SEWQQRLLEWQLAHPSRSAEECIDWMRQSHSKRARTE 1365
EWQQ++L WQLAHPS ++EEC+DW+R++HSKR + +
Sbjct: 540 REWQQKILAWQLAHPSGTSEECLDWIRETHSKRVKLD 576