BLASTX nr result

ID: Panax21_contig00021365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021365
         (1668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]        711   0.0  
ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2...   681   0.0  
ref|XP_002533868.1| protein with unknown function [Ricinus commu...   676   0.0  
ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s...   665   0.0  
ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max]   637   e-180

>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score =  711 bits (1836), Expect = 0.0
 Identities = 355/469 (75%), Positives = 398/469 (84%), Gaps = 2/469 (0%)
 Frame = +1

Query: 31   NPRKRSAVLDEDSYVAAIEKIIERDFFPDIPKLRDRFDWLEAVRTGDPVQIRDAQLKILE 210
            NPRK   VLDED+YVAAIEKI+ERDFFPDIPKLRDR +WLEAVR+GDP++IRD QLKI +
Sbjct: 38   NPRKEVTVLDEDTYVAAIEKIVERDFFPDIPKLRDRLEWLEAVRSGDPLRIRDVQLKIRD 97

Query: 211  RRAGKG-STLDTQ-GKIRTPGSTFFRNTTPLELDKTPLVESNENSGIIESNDDGSIDANL 384
            RR  K  +  +T+  + RTPGSTF R  TP ELDKTP V + E+S   ES DD S    L
Sbjct: 98   RRGRKALNCAETERNRSRTPGSTFTRTFTPFELDKTPDVSNRESSVAGESADDDSEALPL 157

Query: 385  SLDEFFRRYTSEDNDSFSKLIEKVNKKKRERYSFLLEGEKEDVKSIEDAKRERITDGYGT 564
            SLD+FFRRYTSEDN+SFSK++EK N+K++ERY FL EGEKEDVK IED KR+RITDGYGT
Sbjct: 158  SLDQFFRRYTSEDNESFSKILEKANRKRKERYEFLTEGEKEDVKLIEDVKRDRITDGYGT 217

Query: 565  SDQPPSTLEGWNYTAKNLLMYHPSDLGEVALTKEEKDERLRGLTKEISRANTRFHGKMMD 744
            SDQPPSTL+GW YTAKNLLMYHP+D GE  LT+EE+ ERL GLTKE++  NTRFHGK+MD
Sbjct: 218  SDQPPSTLDGWKYTAKNLLMYHPADRGEAPLTEEERAERLNGLTKEVNLTNTRFHGKLMD 277

Query: 745  SVPRDEDNLAVLYAPVAGATPHPFSLSDRNGDKLKKYDLEDLRKTPNPFYVESSKKADNG 924
            S P+DED +AVLY P+ GATP P SLS+R GDK KKYDLEDLRKTPNPFYVES K+ADNG
Sbjct: 278  SRPKDEDTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLEDLRKTPNPFYVESRKRADNG 337

Query: 925  YSYVKTPSPAPGVEESPFITWGEIEGTPLRLEPEDTPFDIGGNGNGPQFKIPLPPSRDVK 1104
            YSYVKTPSPAPGV+ESPFITWGEIEGTPLRLEPEDTP  IGG+G+GP FKIP PPSRD+K
Sbjct: 338  YSYVKTPSPAPGVDESPFITWGEIEGTPLRLEPEDTPIGIGGSGDGPHFKIPCPPSRDLK 397

Query: 1105 AHSLSRDAARKLRERSKMFQKPPLSSPVRRGSASPSARTLSPAAQKFVRNAITKSSHSVN 1284
            AHSLSR+AARKLRERSKMFQKPPL SPVR GSASPS RTLS AAQKFVRNAI KSS S  
Sbjct: 398  AHSLSREAARKLRERSKMFQKPPLPSPVRGGSASPSVRTLSHAAQKFVRNAIAKSSCS-- 455

Query: 1285 VDESLRASYRGASPGVGTPKAGRSVSRLGRDDSMISRSPSIREGSNLPW 1431
            VDESLRASYRGASPG+ TPK+GRS+SR GRD S  +RSPS+REGSN PW
Sbjct: 456  VDESLRASYRGASPGISTPKSGRSMSRFGRDGSTSTRSPSVREGSNPPW 504


>ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1|
            predicted protein [Populus trichocarpa]
          Length = 514

 Score =  681 bits (1757), Expect = 0.0
 Identities = 347/482 (71%), Positives = 402/482 (83%), Gaps = 12/482 (2%)
 Frame = +1

Query: 22   TPKNPRKRSAVLDEDSYVAAIEKIIERDFFPDIPKLRDRFDWLEAVRTGDPVQIRDAQLK 201
            TP NP K   VLDED+YVA IEKIIERDFFPDI KLRDR DWLEA+++GDP+QIRDAQLK
Sbjct: 37   TPINPSKHPTVLDEDTYVATIEKIIERDFFPDISKLRDRLDWLEAMKSGDPIQIRDAQLK 96

Query: 202  ILERRAGKGSTLDTQGKIR------TPGSTFFRNTTPL-ELD---KTPLVESNEN-SGII 348
            I+ERR  K +   + G  R      TPGSTF R+ TP  E D   +TP V  +   S   
Sbjct: 97   IMERRGKKVNNPSSDGSFRSRNRTQTPGSTFMRSLTPFDEFDSRIQTPGVVMDRGLSSNA 156

Query: 349  ESNDDG-SIDANLSLDEFFRRYTSEDNDSFSKLIEKVNKKKRERYSFLLEGEKEDVKSIE 525
            ESN++  ++D NLSLDEFFRRYTSEDNDSFSK++EKVN+K++ERY  LLEGEKEDVK I 
Sbjct: 157  ESNENEVAVDKNLSLDEFFRRYTSEDNDSFSKILEKVNRKRKERYEHLLEGEKEDVKFIG 216

Query: 526  DAKRERITDGYGTSDQPPSTLEGWNYTAKNLLMYHPSDLGEVALTKEEKDERLRGLTKEI 705
            DAKR+RITDG+GTSDQPPSTLEGW YTAKNLLMYHP+D GE  LT+EE+  RL+GLTKEI
Sbjct: 217  DAKRDRITDGFGTSDQPPSTLEGWKYTAKNLLMYHPADRGEAPLTEEEQAVRLKGLTKEI 276

Query: 706  SRANTRFHGKMMDSVPRDEDNLAVLYAPVAGATPHPFSLSDRNGDKLKKYDLEDLRKTPN 885
            +R++TRFHGKM+D+ PRD+  + VLY PVAGATP P  + DR+GDK KKYDLEDLR+TP+
Sbjct: 277  NRSSTRFHGKMLDTRPRDDGVVEVLYTPVAGATPLP--MYDRDGDKAKKYDLEDLRRTPD 334

Query: 886  PFYVESSKKADNGYSYVKTPSPAPGVEESPFITWGEIEGTPLRLEPEDTPFDIGGNGNGP 1065
             FYVES KKAD+GYS+V+TPSPAPGV+ESPFITWGEIEGTP+RLEPEDTP DIGG+GNGP
Sbjct: 335  RFYVESGKKADDGYSFVRTPSPAPGVDESPFITWGEIEGTPMRLEPEDTPIDIGGSGNGP 394

Query: 1066 QFKIPLPPSRDVKAHSLSRDAARKLRERSKMFQKPPLSSPVRRGSASPSARTLSPAAQKF 1245
             FKIP PP+RDVKAHSLSR+A+R+LRE+SKMFQKPPL SP R GSASPS RTLSPAAQKF
Sbjct: 395  HFKIPNPPARDVKAHSLSREASRRLREKSKMFQKPPLPSPSRGGSASPSVRTLSPAAQKF 454

Query: 1246 VRNAITKSSHSVNVDESLRASYRGASPGVGTPKAGRSVSRLGRDDSMISRSPSIREGSNL 1425
            VRNAI++SS S  VDE+LRASYRGASPGVGTPK+GRS+SR GRD S+ SRSPS+RE SN 
Sbjct: 455  VRNAISRSSSS--VDETLRASYRGASPGVGTPKSGRSISRFGRDGSISSRSPSVRENSNP 512

Query: 1426 PW 1431
            PW
Sbjct: 513  PW 514


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
            gi|223526190|gb|EEF28518.1| protein with unknown function
            [Ricinus communis]
          Length = 519

 Score =  676 bits (1744), Expect = 0.0
 Identities = 343/486 (70%), Positives = 403/486 (82%), Gaps = 16/486 (3%)
 Frame = +1

Query: 22   TPKNPRKRSAVLDEDSYVAAIEKIIERDFFPDIPKLRDRFDWLEAVRTGDPVQIRDAQLK 201
            TP N RKR+ VLDED+YVAAIEKIIERDFFPDI KLRDR DWLEAV+TGDP+QIRDAQLK
Sbjct: 38   TPSNHRKRARVLDEDTYVAAIEKIIERDFFPDISKLRDRLDWLEAVKTGDPIQIRDAQLK 97

Query: 202  ILERRAGKGSTLDTQG--------KIRTPGSTFFRNTTPLE------LDKTPLVESNENS 339
            I+ERR  + ++ ++ G        + +TPGSTF RN  P +       +KTP ++   + 
Sbjct: 98   IIERRGKRVNSSNSDGSTQTRNRSQTQTPGSTFMRNLNPFDEFDIINSNKTPRMDMFGDK 157

Query: 340  GIIESND--DGSIDANLSLDEFFRRYTSEDNDSFSKLIEKVNKKKRERYSFLLEGEKEDV 513
               ++ND  D ++D  LSLDEFFRRYTSEDN+SFSK++EKVN+K++E Y  LLEGEKEDV
Sbjct: 158  EKSDNNDEADDAVDEFLSLDEFFRRYTSEDNESFSKILEKVNRKRKETYGHLLEGEKEDV 217

Query: 514  KSIEDAKRERITDGYGTSDQPPSTLEGWNYTAKNLLMYHPSDLGEVALTKEEKDERLRGL 693
            K IED KR+RITDGYGTSDQP STLEGWNYTAKNLLMYHP+D GEVALT+EE+  RL+GL
Sbjct: 218  KLIEDVKRDRITDGYGTSDQPVSTLEGWNYTAKNLLMYHPADRGEVALTEEERAVRLKGL 277

Query: 694  TKEISRANTRFHGKMMDSVPRDEDNLAVLYAPVAGATPHPFSLSDRNGDKLKKYDLEDLR 873
            TKEI+R+NTRFHGKM+DS P+D+ ++ VLY PV G TP P  +S R+GDK KKYDLEDLR
Sbjct: 278  TKEINRSNTRFHGKMLDSRPKDDGSVEVLYTPVVGGTPLP--VSGRHGDKAKKYDLEDLR 335

Query: 874  KTPNPFYVESSKKADNGYSYVKTPSPAPGVEESPFITWGEIEGTPLRLEPEDTPFDIGGN 1053
            +TPN FY+ES KKA+NGY++V+TPSPAPGV+ESPFITWGEIEGTPLRLE EDTP DIGG+
Sbjct: 336  RTPNNFYMESGKKAENGYAFVRTPSPAPGVDESPFITWGEIEGTPLRLESEDTPIDIGGS 395

Query: 1054 GNGPQFKIPLPPSRDVKAHSLSRDAARKLRERSKMFQKPPLSSPVRRGSASPSARTLSPA 1233
            G+GP FKI  PP+RDVKAH+LSR+AARKLRERSKMFQKPPL SP R GSASP+ RTLSPA
Sbjct: 396  GDGPHFKILNPPARDVKAHTLSREAARKLRERSKMFQKPPLPSPGRGGSASPNVRTLSPA 455

Query: 1234 AQKFVRNAITKSSHSVNVDESLRASYRGASPGVGTPKAGRSVSRLGRDDSMISRSPSIRE 1413
            AQKF+RNAI+KSS S  VDESLRASYRG+SPG+GTPK+ RSVSR GRD SM SRSPS+RE
Sbjct: 456  AQKFMRNAISKSSSS--VDESLRASYRGSSPGIGTPKSVRSVSRFGRDGSMGSRSPSVRE 513

Query: 1414 GSNLPW 1431
             SN PW
Sbjct: 514  DSNPPW 519


>ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus]
          Length = 509

 Score =  665 bits (1716), Expect = 0.0
 Identities = 332/478 (69%), Positives = 393/478 (82%), Gaps = 8/478 (1%)
 Frame = +1

Query: 22   TPKNPRKRSAVLDEDSYVAAIEKIIERDFFPDIPKLRDRFDWLEAVRTGDPVQIRDAQLK 201
            TP++ RK   VLDEDSYV AIEKIIERD+FPDI KLRDR DWLEA+++ DP+ IRDAQLK
Sbjct: 36   TPQSSRKHPKVLDEDSYVEAIEKIIERDYFPDISKLRDRLDWLEAIKSADPILIRDAQLK 95

Query: 202  ILERRAGKGSTLDTQGKIRTPGSTFFRNTTPLEL--DKTPLVESNENSGIIESNDDGS-- 369
            I+ERR  K   L+  GK +TPGSTF R+ TP +    KTP       SG++   ++G   
Sbjct: 96   IMERRGQKVKRLNPDGKSQTPGSTFMRSFTPFDEFEGKTPKTPGFGGSGVVGVTEEGGSD 155

Query: 370  ---IDANLSLDEFFRRYTSEDNDSFSKLIEKVNKKKRERYSFLLEGEKEDVKSIEDAKRE 540
               +D +LSLDEFFR+YTSEDN SFSK++EK N+K++ERY++L EGEK+DVKSIED KR+
Sbjct: 156  GKVVDESLSLDEFFRQYTSEDNFSFSKILEKDNRKRKERYAYLTEGEKDDVKSIEDVKRD 215

Query: 541  RITDGYGTSDQPPSTLEGWNYTAKNLLMYHPSDLGEVALTKEEKDERLRGLTKEISRANT 720
            RITDGYGTSDQPPSTLEGW YTAKNLLMYHPSD GE  LT+EE+  RL+GLTKEI+R++T
Sbjct: 216  RITDGYGTSDQPPSTLEGWKYTAKNLLMYHPSDRGEAPLTEEERAVRLKGLTKEINRSST 275

Query: 721  RFHGKMMDSVPRDEDNLAVLYAPVAGATPHPFSLSDRNGDKLKKYDLEDLRKTPNPFYVE 900
            RFHGK+MDS P+D+ ++ V+YAPVAG TPHP  + DR+GD+LKKYDLEDLRKTPNPFYVE
Sbjct: 276  RFHGKLMDSRPKDDGSVEVIYAPVAGTTPHP--VLDRDGDRLKKYDLEDLRKTPNPFYVE 333

Query: 901  SSKKADNGYSYVKTPSPAPGVEESPFITWGEIEGTPLRLEPEDTPFDIGGNGNGPQFKIP 1080
            S K+A+NGYS+V+TPSPAPGV+ESPFITWGEIEGTPLRL+PEDTP DIGG+ +GP++ IP
Sbjct: 334  SGKRAENGYSFVRTPSPAPGVDESPFITWGEIEGTPLRLDPEDTPIDIGGSVDGPRYNIP 393

Query: 1081 LPPSRDVKAHSLSRDAARKLRERSKMFQKPPLSSPVRRGSASPSA-RTLSPAAQKFVRNA 1257
             P +RD KAHSLSR+AARKLRE+SKMFQKPPL SPVR GSASPS  RTLSPAAQKFVRNA
Sbjct: 394  CPAARDEKAHSLSREAARKLREKSKMFQKPPLPSPVRGGSASPSVKRTLSPAAQKFVRNA 453

Query: 1258 ITKSSHSVNVDESLRASYRGASPGVGTPKAGRSVSRLGRDDSMISRSPSIREGSNLPW 1431
            I KSS S   DE+LRASYRG SP   TPK+GRS+SR  RD S  SRSPS++EGSN  W
Sbjct: 454  IAKSSSS--FDETLRASYRGGSPSAATPKSGRSLSRFARDGSFGSRSPSVKEGSNPAW 509


>ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max]
          Length = 500

 Score =  637 bits (1642), Expect = e-180
 Identities = 326/476 (68%), Positives = 377/476 (79%), Gaps = 13/476 (2%)
 Frame = +1

Query: 40   KRSAVLDEDSYVAAIEKIIERDFFPDIPKLRDRFDWLEAVRTGDPVQIRDAQLKILERRA 219
            K  AVLDED+YV A+EKIIERD+FPDI KLRDR DWLEA++TGDPV IR+AQLKILERRA
Sbjct: 37   KHPAVLDEDTYVEALEKIIERDYFPDISKLRDRLDWLEAIKTGDPVVIREAQLKILERRA 96

Query: 220  GKGSTLDTQGKIRT----PGSTFFRNTTPLE--------LDKTPLVESNENSGIIESNDD 363
            G     +     RT    PGSTF RN TPL+          + P  E+ E       N+D
Sbjct: 97   GTAKVTNHNDTSRTTSHTPGSTFVRNFTPLDEFDGKPSQTPRAPAPEAKEGE-----NND 151

Query: 364  GSIDANLSLDEFFRRYTSEDNDSFSKLIEKVNKKKRERYSFLLEGEKEDVKSIEDAKRER 543
            G +D +L LD+F RRYTSEDN SFSK++EKVNKK++ER+ +L     EDV+ IED KR+R
Sbjct: 152  GGVDTSLGLDQFMRRYTSEDNHSFSKILEKVNKKRKERFGYL----NEDVQGIEDVKRDR 207

Query: 544  ITDGYGTSDQPPSTLEGWNYTAKNLLMYHPSDLGEVALTKEEKDERLRGLTKEISRANTR 723
            ITDGYGTS QPPSTLEGWNYTAKNLLMYHP+D GEV LT+EE+  R++  TKEI+R NTR
Sbjct: 208  ITDGYGTSYQPPSTLEGWNYTAKNLLMYHPADRGEVPLTEEERAHRIKAATKEINRGNTR 267

Query: 724  FHGKMMDSVPRDEDNLAVLYAPVAGATPHPFSLSDRNGDKLKKYDLEDLRKTPNPFYVES 903
            FHGKMMDS P+D+  + VLY PV GATP P SL  R GDKLKKYDLEDLRKTPNPFY+ES
Sbjct: 268  FHGKMMDSRPKDDGTVEVLYTPVGGATPAPMSL--REGDKLKKYDLEDLRKTPNPFYLES 325

Query: 904  SKKADNGYSYVKTPSPAPGVEESPFITWGEIEGTPLRLEPEDTPFDIGGNGNGPQFKIPL 1083
             KKA+NGYS+VKTPSPAPGV+ESPFITWGEIEGTPLRL+ EDTP DIGG+ +GP +KIP 
Sbjct: 326  GKKAENGYSFVKTPSPAPGVDESPFITWGEIEGTPLRLDLEDTPLDIGGSADGPHYKIPS 385

Query: 1084 PPSRDVKAHSLSRDAARKLRERSKMFQKPPLSSPVRRGSASPSARTLSPAAQKFVRNAIT 1263
             P+RD KAHSLSR+AARK+RERSKMF KPPL+SPVR GSASPS RTLSPAAQKFVRNA  
Sbjct: 386  APARDSKAHSLSREAARKIRERSKMFHKPPLASPVRGGSASPSMRTLSPAAQKFVRNAFA 445

Query: 1264 KSSHSVNVDESLRASYRGASPGVGTPKA-GRSVSRLGRDDSMISRSPSIREGSNLP 1428
            KSS S  VDE+LRASYRG++P + TP++  RSVSR GRD S+ SRSPS+REGSN P
Sbjct: 446  KSSSS--VDETLRASYRGSTPALATPRSVSRSVSRFGRDGSLASRSPSVREGSNPP 499


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