BLASTX nr result

ID: Panax21_contig00021336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021336
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518345.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_002298509.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
emb|CAN79722.1| hypothetical protein VITISV_017865 [Vitis vinifera]    77   3e-12
ref|XP_003631715.1| PREDICTED: uncharacterized protein LOC100854...    75   6e-12
ref|XP_002265802.1| PREDICTED: uncharacterized protein LOC100245...    75   8e-12

>ref|XP_002518345.1| conserved hypothetical protein [Ricinus communis]
           gi|223542565|gb|EEF44105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 989

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
 Frame = -3

Query: 580 AQNDINAVE--HEKNVAATNKIVKHVDTNLSRTQQKLGTSTEVKELTSAATVRDYVLP-V 410
           A+ DINA E   +K    +NK V  +   L     ++  + E+KELT+A     Y+LP +
Sbjct: 180 AKKDINAEEMTEKKETTTSNKKVGKIKHYLVPAVDRISAALEIKELTAAMGSCQYLLPDI 239

Query: 409 PPTLRIQKDWTCAVCQIKTTCEVTFNSHLQGRKHKSKCEKLKSSMHAMKVEGS-STASNQ 233
           PP+ +I K+W C +CQ+ TT E    SHL G++HK+  EKLK     ++ + S  +A   
Sbjct: 240 PPSRKISKEWVCPICQVTTTSEADCISHLLGKRHKAASEKLKVQNQMLQSQNSVGSAERD 299

Query: 232 EPKKAISGNRLG 197
            PK+  S   +G
Sbjct: 300 APKEMASAMEVG 311



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/106 (31%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
 Frame = -3

Query: 568  INAVEHEKNVAATNKI----VKHVDTNLSRTQQKLGTSTEVKELTSAATVRDYVLPVPPT 401
            I+ ++  +N A++N +    +  +++N S    + GT  E   ++ A +    V  +PP+
Sbjct: 716  ISHLQGRQNEASSNNLKANWMLQLESNSSLDLLEPGTPKETAPVSEAGSD---VYDIPPS 772

Query: 400  LRIQKDWTCAVCQIKTTCEVTFNSHLQGRKHKSKCEKLKSSMHAMK 263
            + IQK+W+C+V  + TT EV   SH QG++H+  CE+LK+     K
Sbjct: 773  MDIQKEWSCSVSPVVTTSEVDHISHSQGKQHEDMCERLKAKSQTSK 818



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
 Frame = -3

Query: 550 EKNVAATNKIVKHVDTNLSRTQQKLGTSTE--VKELTSAATVRDYVLPVPPTLRIQKDWT 377
           +++ AA+ K+   V   + ++Q  +G++     KE+ SA  V   +   PP+  IQ +W 
Sbjct: 271 KRHKAASEKL--KVQNQMLQSQNSVGSAERDAPKEMASAMEVGRDLPEKPPSNNIQ-EWN 327

Query: 376 CAVCQIKTTCEVTFNSHLQGRKHKSKCEKLKSSMHAMKVE 257
           C +CQ+ TT +  F SHL G KH     KLK++ H M+ E
Sbjct: 328 CPICQVTTTSQTVFISHLHGGKHDVASWKLKANEHLMQSE 367


>ref|XP_002298509.1| predicted protein [Populus trichocarpa] gi|222845767|gb|EEE83314.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
 Frame = -3

Query: 571 DINAVE--HEKNVAATNKIVKHVDTNLSRTQQKLGTSTEVKELTSAATV---RDYVLPVP 407
           D NAVE   +K V++TN+ V+ ++ N+ +T+ +  T   +K +T+AA     RD    +P
Sbjct: 230 DSNAVEITEKKEVSSTNQ-VRQIEPNIGQTENR--TFQPLKNITTAAEAIGGRDLYEILP 286

Query: 406 PTLRIQKDWTCAVCQIKTTCEVTFNSHLQGRKHKSKCEKLKSSMHAMKVEGSSTASNQEP 227
           P  ++QK WTCA+CQ+    E   NSHLQG++HK+  E+LK      K E SS +  ++ 
Sbjct: 287 PE-KVQKVWTCALCQVTAQSETVLNSHLQGKRHKAAREQLKVKSQTPKGEVSSASVGKKS 345

Query: 226 KKAISGNRLG 197
              ++  R+G
Sbjct: 346 NVTMATARIG 355


>emb|CAN79722.1| hypothetical protein VITISV_017865 [Vitis vinifera]
          Length = 441

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
 Frame = -3

Query: 547 KNVAATNKIVKHVDTNLSRTQQKLGTSTEVKELTSAATV------RDYVLP-VPPTLRIQ 389
           KN     K VK  + NL  T+     + E+KE  +A         RD   P +P   ++Q
Sbjct: 149 KNGGDGAKRVKQTEINLGETRSNTTCAVEIKERAAALVAAEIEACRDDRTPKIPLHEKVQ 208

Query: 388 KDWTCAVCQIKTTCEVTFNSHLQGRKHKSKCEKLKSSMHAMKVEGSST-----ASNQEPK 224
           K+W CAVCQ+ T  E TFNSHLQG++H++  EKL++   A K   S+        + E +
Sbjct: 209 KEWACAVCQVTTQSEATFNSHLQGKRHQATSEKLRAKNQATKTTASTVKKPDDTKDDERQ 268

Query: 223 KAISGN 206
           K+ S N
Sbjct: 269 KSASSN 274


>ref|XP_003631715.1| PREDICTED: uncharacterized protein LOC100854527 [Vitis vinifera]
          Length = 407

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
 Frame = -3

Query: 532 TNKIVKHVDTNLSRTQQKLGTSTEVKELTSAATV------RDYVLP-VPPTLRIQKDWTC 374
           T + V+  D NL  T+     + E+KE  +A         RD   P +P   ++QK+W C
Sbjct: 201 TEQWVERSDINLGETRSNTTCAVEIKERAAALVAAEIEACRDNRTPEIPLHKKVQKEWAC 260

Query: 373 AVCQIKTTCEVTFNSHLQGRKHKSKCEKLKSSMHAMKVEGSSTAS 239
           AVCQ  T  EVTFNSHLQG++H++  E+L++   A K   S +AS
Sbjct: 261 AVCQFTTQSEVTFNSHLQGKRHQATSEQLRAKNQATKTNCSPSAS 305


>ref|XP_002265802.1| PREDICTED: uncharacterized protein LOC100245618 [Vitis vinifera]
          Length = 490

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
 Frame = -3

Query: 568 INAVEHEKNVAATNKIVKHVDTNLSRTQQKLGTSTEVKELTSAATV------RDYVLP-V 410
           +  V H +    T + VK  + NL  T+     + E+KE  +A         RD   P +
Sbjct: 220 VTEVTH-RTFGGTAQWVKRTEINLGETRSNTTCAVEIKERAAALVAAEIEACRDDRTPKI 278

Query: 409 PPTLRIQKDWTCAVCQIKTTCEVTFNSHLQGRKHKSKCEKLKSSMHAMKVEGSSTAS 239
           P   ++QK+W CAVCQ+ T  E TFNSHLQG++H++  E+L++   A K   S +AS
Sbjct: 279 PLHEKVQKEWACAVCQVTTQSEATFNSHLQGKRHQATSEQLRAKNQATKTNCSPSAS 335


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